RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 TEX2Q8IWB9 1127 aa18.33■□□□□ 0.52
PPP6R1-204ENST00000587457 VGLL2Q8N8G2 317 aa18.33■□□□□ 0.52
PPP6R1-204ENST00000587457 NIP7Q9Y221 180 aaKnown RBP eCLIP18.33■□□□□ 0.52
PPP6R1-204ENST00000587457 MAST3O60307 1309 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 DPCR1Q3MIW9 517 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 GOLGA6L1Q8N7Z2 621 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 USP28Q96RU2 1077 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 SDF4Q9BRK5 362 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 PARD6BQ9BYG5 372 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 NUP98P52948 1817 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 H3BQF6 201 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 M0R2C6 588 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 DHX8Q14562 1220 aaKnown RBP18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 IQUBQ8NA54 791 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 LINC00116Q8NCU8 138 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 HELBQ8NG08 1087 aaPredicted RBP18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 ANKRD36CQ5JPF3 1778 aa18.32■□□□□ 0.52
PPP6R1-204ENST00000587457 OSBP2Q969R2 916 aa18.31■□□□□ 0.52
PPP6R1-204ENST00000587457 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
PPP6R1-204ENST00000587457 PDE8BO95263 885 aa18.31■□□□□ 0.52
PPP6R1-204ENST00000587457 ME1P48163 572 aa18.31■□□□□ 0.52
PPP6R1-204ENST00000587457 SMIM5Q71RC9 77 aa18.31■□□□□ 0.52
PPP6R1-204ENST00000587457 A0A0G2JLW4 131 aa18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 MCAMP43121 646 aa18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 KRT32Q14532 448 aa18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 PARP10Q53GL7 1025 aa18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 NEK1Q96PY6 1258 aa18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 USP21Q9UK80 565 aa18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 HSPD1P10809 573 aaKnown RBP18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 HSP90B1P14625 803 aaKnown RBP18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 FAM182BQ5T319 152 aa18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 LEKR1Q6ZMV7 388 aa18.3■□□□□ 0.52
PPP6R1-204ENST00000587457 NTSR2O95665 410 aa18.29■□□□□ 0.52
PPP6R1-204ENST00000587457 WASHC4Q2M389 1173 aa18.29■□□□□ 0.52
PPP6R1-204ENST00000587457 NOM1Q5C9Z4 860 aaKnown RBP18.29■□□□□ 0.52
PPP6R1-204ENST00000587457 STOX1Q6ZVD7 989 aa18.29■□□□□ 0.52
PPP6R1-204ENST00000587457 BPIFA3Q9BQP9 254 aa18.29■□□□□ 0.52
PPP6R1-204ENST00000587457 DSCC1Q9BVC3 393 aa18.29■□□□□ 0.52
PPP6R1-204ENST00000587457 LOC102724159A0A0B4J2E5 919 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 CHRM1P11229 460 aaPredicted RBP18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 MAP3K9P80192 1104 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 PPP2R3AQ06190 1150 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 PWP2Q15269 919 aaKnown RBP18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 LONRF2Q1L5Z9 754 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 RSRC2Q7L4I2 434 aaKnown RBP18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 FMR1NBQ8N0W7 255 aaPredicted RBP18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 KIAA1468Q9P260 1216 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 A0A1B0GVL5 298 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 SNAP23O00161 211 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 TICAM2Q86XR7 235 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 JRKLQ9Y4A0 524 aa18.28■□□□□ 0.52
PPP6R1-204ENST00000587457 MYH14Q7Z406 1995 aaKnown RBP18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 VWA3AA6NCI4 1184 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 BIN1O00499 593 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 IVLP07476 585 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 PHKA1P46020 1223 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 FANCCQ00597 558 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 TTC31Q49AM3 519 aaPredicted RBP18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 Q6ZUG5 572 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 PACS2Q86VP3 889 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 ZNF396Q96N95 335 aaPredicted RBP18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 LMOD1P29536 600 aaPredicted RBP18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 MAGEA9P43362 315 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 GOLGA8FQ08AF8 430 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 GOLGA8DPQ0D2H9 430 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 SCRN1Q12765 414 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 NCAPHQ15003 741 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 MPHOSPH8Q99549 860 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 LRRC2Q9BYS8 371 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 VPS18Q9P253 973 aa18.27■□□□□ 0.52
PPP6R1-204ENST00000587457 GUCY2CP25092 1073 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 PUM3Q15397 648 aaKnown RBP18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 CCDC102BQ68D86 513 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 FOXR1Q6PIV2 292 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 MRPS27Q92552 414 aaKnown RBP18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 RABGGTAQ92696 567 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 PCDHA7Q9UN72 937 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 MROH5Q6ZUA9 1318 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 ZSCAN12O43309 604 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 GNG11P61952 73 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 CCDC152Q4G0S7 254 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 TTLL5Q6EMB2 1281 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 NAA16Q6N069 864 aaPredicted RBP18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 WDR24Q96S15 920 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 PUS7LQ9H0K6 701 aaKnown RBP18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 BRMS1Q9HCU9 246 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 ZNF652Q9Y2D9 606 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 MRFAP1Q9Y605 127 aa18.26■□□□□ 0.51
PPP6R1-204ENST00000587457 ABCC12Q96J65 1359 aa18.25■□□□□ 0.51
PPP6R1-204ENST00000587457 MAP2K7O14733 419 aa18.25■□□□□ 0.51
PPP6R1-204ENST00000587457 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
PPP6R1-204ENST00000587457 NDUFA8P51970 172 aa18.25■□□□□ 0.51
PPP6R1-204ENST00000587457 SMARCC2Q8TAQ2 1214 aa18.25■□□□□ 0.51
PPP6R1-204ENST00000587457 LPIN2Q92539 896 aa18.25■□□□□ 0.51
PPP6R1-204ENST00000587457 RREB1Q92766 1687 aa18.25■□□□□ 0.51
PPP6R1-204ENST00000587457 ATP1A3P13637 1013 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms