RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MAP4K4O95819 1239 aaPredicted RBP24.94■■□□□ 1.58
SS18-224ENST00000584083 ALDH1A1P00352 501 aa24.94■■□□□ 1.58
SS18-224ENST00000584083 IFIT2P09913 472 aaKnown RBP24.94■■□□□ 1.58
SS18-224ENST00000584083 DDX4Q9NQI0 724 aaKnown RBP24.94■■□□□ 1.58
SS18-224ENST00000584083 SNCAIPQ9Y6H5 919 aa24.94■■□□□ 1.58
SS18-224ENST00000584083 RFX7Q2KHR2 1363 aa24.93■■□□□ 1.58
SS18-224ENST00000584083 SPDYE5A6NIY4 337 aa24.92■■□□□ 1.58
SS18-224ENST00000584083 IDH1O75874 414 aaKnown RBP24.92■■□□□ 1.58
SS18-224ENST00000584083 BAG3O95817 575 aa24.92■■□□□ 1.58
SS18-224ENST00000584083 INPP5BP32019 993 aa24.92■■□□□ 1.58
SS18-224ENST00000584083 RRP1P56182 461 aaKnown RBP24.92■■□□□ 1.58
SS18-224ENST00000584083 OTUD7BQ6GQQ9 843 aa24.92■■□□□ 1.58
SS18-224ENST00000584083 ERO1BQ86YB8 467 aa24.92■■□□□ 1.58
SS18-224ENST00000584083 TEX11Q8IYF3 940 aa24.92■■□□□ 1.58
SS18-224ENST00000584083 NDUFB9Q9Y6M9 179 aa24.92■■□□□ 1.58
SS18-224ENST00000584083 IGF2BP3O00425 579 aaKnown RBP eCLIP24.91■■□□□ 1.58
SS18-224ENST00000584083 DGKZQ13574 1117 aa24.91■■□□□ 1.58
SS18-224ENST00000584083 SH3BP5LQ7L8J4 393 aa24.91■■□□□ 1.58
SS18-224ENST00000584083 AATFQ9NY61 560 aaKnown RBP eCLIP24.91■■□□□ 1.58
SS18-224ENST00000584083 ZNF112Q9UJU3 913 aa24.91■■□□□ 1.58
SS18-224ENST00000584083 DDTLA6NHG4 134 aaPredicted RBP24.9■■□□□ 1.58
SS18-224ENST00000584083 IGSF3O75054 1194 aa24.9■■□□□ 1.58
SS18-224ENST00000584083 PLCG2P16885 1265 aa24.9■■□□□ 1.58
SS18-224ENST00000584083 GTF2A2P52657 109 aa24.9■■□□□ 1.58
SS18-224ENST00000584083 SH3RF3Q8TEJ3 882 aaPredicted RBP24.9■■□□□ 1.58
SS18-224ENST00000584083 TESPA1A2RU30 521 aaPredicted RBP24.89■■□□□ 1.58
SS18-224ENST00000584083 NPM3O75607 178 aaKnown RBP24.89■■□□□ 1.58
SS18-224ENST00000584083 CYP7A1P22680 504 aa24.89■■□□□ 1.58
SS18-224ENST00000584083 MS4A4AQ96JQ5 239 aa24.89■■□□□ 1.58
SS18-224ENST00000584083 ANTXR1Q9H6X2 564 aa24.89■■□□□ 1.58
SS18-224ENST00000584083 CCL15-CCL14A0A0B4J2E2 113 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 GPR25O00155 361 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 MAP3K12Q12852 859 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 CCL15Q16663 113 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 ADGRA1Q86SQ6 560 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 ZNF296Q8WUU4 475 aaPredicted RBP24.88■■□□□ 1.57
SS18-224ENST00000584083 ABHD8Q96I13 439 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 PTPN18Q99952 460 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 CFHR5Q9BXR6 569 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 LRRCC1Q9C099 1032 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 MCOLN1Q9GZU1 580 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 R3HDMLQ9H3Y0 253 aa24.88■■□□□ 1.57
SS18-224ENST00000584083 PPP4CP60510 307 aa24.87■■□□□ 1.57
SS18-224ENST00000584083 PPIL2Q13356 520 aa24.87■■□□□ 1.57
SS18-224ENST00000584083 MAGEB6Q8N7X4 407 aa24.87■■□□□ 1.57
SS18-224ENST00000584083 BRI3BPQ8WY22 251 aa24.87■■□□□ 1.57
SS18-224ENST00000584083 OSBPL5Q9H0X9 879 aaPredicted RBP24.87■■□□□ 1.57
SS18-224ENST00000584083 ATRNL1Q5VV63 1379 aa24.87■■□□□ 1.57
SS18-224ENST00000584083 CDK5RAP2Q96SN8 1893 aa24.87■■□□□ 1.57
SS18-224ENST00000584083 IRF6O14896 467 aa24.86■■□□□ 1.57
SS18-224ENST00000584083 PPATQ06203 517 aa24.86■■□□□ 1.57
SS18-224ENST00000584083 TTF1Q15361 905 aaPredicted RBP24.86■■□□□ 1.57
SS18-224ENST00000584083 PHF20L1A8MW92 1017 aa24.85■■□□□ 1.57
SS18-224ENST00000584083 CETPP11597 493 aa24.85■■□□□ 1.57
SS18-224ENST00000584083 SNAPC2Q13487 334 aa24.85■■□□□ 1.57
SS18-224ENST00000584083 NOM1Q5C9Z4 860 aaKnown RBP24.85■■□□□ 1.57
SS18-224ENST00000584083 NOL9Q5SY16 702 aaKnown RBP24.85■■□□□ 1.57
SS18-224ENST00000584083 DNAJC2Q99543 621 aaKnown RBP24.85■■□□□ 1.57
SS18-224ENST00000584083 SMARCA5O60264 1052 aaPredicted RBP24.84■■□□□ 1.57
SS18-224ENST00000584083 FKTNO75072 461 aa24.84■■□□□ 1.57
SS18-224ENST00000584083 SLURP2P0DP57 97 aa24.84■■□□□ 1.57
SS18-224ENST00000584083 MAP3K10Q02779 954 aa24.84■■□□□ 1.57
SS18-224ENST00000584083 CTU1Q7Z7A3 348 aaKnown RBP24.84■■□□□ 1.57
SS18-224ENST00000584083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.84■■□□□ 1.57
SS18-224ENST00000584083 TGFBRAP1Q8WUH2 860 aa24.84■■□□□ 1.57
SS18-224ENST00000584083 PICK1Q9NRD5 415 aa24.84■■□□□ 1.57
SS18-224ENST00000584083 GOLIM4O00461 696 aa24.83■■□□□ 1.57
SS18-224ENST00000584083 DYNLL1P63167 89 aaKnown RBP24.83■■□□□ 1.57
SS18-224ENST00000584083 CRHR2Q13324 411 aa24.83■■□□□ 1.57
SS18-224ENST00000584083 MAPKAPK5Q8IW41 473 aa24.83■■□□□ 1.57
SS18-224ENST00000584083 SCYL3Q8IZE3 742 aa24.83■■□□□ 1.57
SS18-224ENST00000584083 MIGA1Q8NAN2 632 aa24.83■■□□□ 1.57
SS18-224ENST00000584083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.83■■□□□ 1.57
SS18-224ENST00000584083 FOCADQ5VW36 1801 aa24.83■■□□□ 1.57
SS18-224ENST00000584083 COL2A1P02458 1487 aaPredicted RBP24.83■■□□□ 1.56
SS18-224ENST00000584083 FAM196BA6NMK8 535 aa24.82■■□□□ 1.56
SS18-224ENST00000584083 CRBNQ96SW2 442 aa24.82■■□□□ 1.56
SS18-224ENST00000584083 BOLA2Q9H3K6 86 aa24.82■■□□□ 1.56
SS18-224ENST00000584083 DCTPP1Q9H773 170 aa24.82■■□□□ 1.56
SS18-224ENST00000584083 PCDHB15Q9Y5E8 787 aa24.82■■□□□ 1.56
SS18-224ENST00000584083 TBC1D12O60347 775 aa24.81■■□□□ 1.56
SS18-224ENST00000584083 ATP5JP18859 108 aa24.81■■□□□ 1.56
SS18-224ENST00000584083 TMED8Q6PL24 325 aaPredicted RBP24.81■■□□□ 1.56
SS18-224ENST00000584083 DOCK1Q14185 1865 aa24.81■■□□□ 1.56
SS18-224ENST00000584083 CTNND1O60716 968 aaKnown RBP24.8■■□□□ 1.56
SS18-224ENST00000584083 TAF1CQ15572 869 aaPredicted RBP24.8■■□□□ 1.56
SS18-224ENST00000584083 SLC9C2Q5TAH2 1124 aa24.8■■□□□ 1.56
SS18-224ENST00000584083 CERS3Q8IU89 383 aa24.8■■□□□ 1.56
SS18-224ENST00000584083 FAM43AQ8N2R8 423 aa24.8■■□□□ 1.56
SS18-224ENST00000584083 DHX36Q9H2U1 1008 aaKnown RBP24.8■■□□□ 1.56
SS18-224ENST00000584083 PI4KBQ9UBF8 816 aa24.8■■□□□ 1.56
SS18-224ENST00000584083 FLT1P17948 1338 aa24.8■■□□□ 1.56
SS18-224ENST00000584083 CCDC85CA6NKD9 419 aa24.79■■□□□ 1.56
SS18-224ENST00000584083 EDC3Q96F86 508 aaKnown RBP24.79■■□□□ 1.56
SS18-224ENST00000584083 ZFYVE28Q9HCC9 887 aa24.79■■□□□ 1.56
SS18-224ENST00000584083 ZHX2Q9Y6X8 837 aa24.79■■□□□ 1.56
SS18-224ENST00000584083 MYH1P12882 1939 aa24.78■■□□□ 1.56
SS18-224ENST00000584083 BTBD19C9JJ37 291 aa24.78■■□□□ 1.56
SS18-224ENST00000584083 PDE6AP16499 860 aa24.78■■□□□ 1.56
SS18-224ENST00000584083 PTPRAP18433 802 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms