RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ARID5AQ03989 594 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 CLIC4Q9Y696 253 aa14.77□□□□□ -0.05
PCDHGB3-201ENST00000576222 IKBKBO14920 756 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 BEND3Q5T5X7 828 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 APPBP2Q92624 585 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 LRRC27Q9C0I9 530 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 NCOA3Q9Y6Q9 1424 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 EIF4A1P60842 406 aaKnown RBP14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 PAK1Q13153 545 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 CCDC144BQ3MJ40 725 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 METTL22Q9BUU2 404 aaPredicted RBP14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 KCNF1Q9H3M0 494 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 DEXIO95424 95 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 SSR1P43307 286 aaKnown RBP14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 PDE4BQ07343 736 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 GOLGA8FQ08AF8 430 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 GOLGA8DPQ0D2H9 430 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 CERS3Q8IU89 383 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 BCAS4Q8TDM0 211 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 ANKRD7Q92527 254 aa14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 SECISBP2LQ93073 1101 aaKnown RBP14.76□□□□□ -0.05
PCDHGB3-201ENST00000576222 EYA2O00167 538 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 NFATC2IPQ8NCF5 419 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 SELENOSQ9BQE4 189 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 CETN2P41208 172 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 RESTQ13127 1097 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 UBE4AQ14139 1066 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 SPTY2D1Q68D10 685 aaPredicted RBP14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 EFCC1Q9HA90 598 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 FAN1Q9Y2M0 1017 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 TLDC2A0PJX2 215 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 CYP7A1P22680 504 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 CALML3P27482 149 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 GNGT1P63211 74 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 FBXO18Q8NFZ0 1043 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 ZKSCAN3Q9BRR0 538 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 FAM204AQ9H8W3 233 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 GPAA1O43292 621 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 IFT20Q8IY31 132 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 NSUN7Q8NE18 718 aaKnown RBP14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 PCDHA5Q9Y5H7 936 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 CAPN7Q9Y6W3 813 aa14.75□□□□□ -0.05
PCDHGB3-201ENST00000576222 MYO1CO00159 1063 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 ZNF76P36508 570 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 NECTIN1Q15223 517 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 ZNF827Q17R98 1081 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 CTNNBL1Q8WYA6 563 aaPredicted RBP14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 KIF4AO95239 1232 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 PDIA3P30101 505 aaKnown RBP14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 GCKRQ14397 625 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 IL17REQ8NFR9 667 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 NOC4LQ9BVI4 516 aaKnown RBP14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 RTL9Q8NET4 1388 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 VAT1LQ9HCJ6 419 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 USP27XA6NNY8 438 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 CALM1P0DP23 149 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 CALM2P0DP24 149 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 CALM3P0DP25 149 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 ATP6V1AP38606 617 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 DZIP1Q86YF9 867 aaKnown RBP14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 PI4K2BQ8TCG2 481 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 CABS1Q96KC9 395 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 PLIN2Q99541 437 aa14.74□□□□□ -0.05
PCDHGB3-201ENST00000576222 MYL10Q9BUA6 226 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 SAMD15Q9P1V8 674 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 ADCY9O60503 1353 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 UBLCP1Q8WVY7 318 aaPredicted RBP14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 JRKLQ9Y4A0 524 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 ATP7AQ04656 1500 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 OR8K1Q8NGG5 319 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 LMBR1Q8WVP7 490 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 TTC14Q96N46 770 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 PSMB7Q99436 277 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 NUP58Q9BVL2 599 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 ADAM21Q9UKJ8 722 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 ARHGEF10O15013 1369 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 CYP21A2P08686 494 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 GNAT2P19087 354 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 CLNS1AP54105 237 aaKnown RBP14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 MYOM2P54296 1465 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 PTPN21Q16825 1174 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 ZNF710Q8N1W2 664 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 STAMQ92783 540 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 CAPS2Q9BXY5 557 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 KCNJ14Q9UNX9 436 aa14.73□□□□□ -0.05
PCDHGB3-201ENST00000576222 CCT5P48643 541 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 PGBD1Q96JS3 809 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 CLIC6Q96NY7 704 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 UHRF1BP1LA0JNW5 1464 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 CSGALNACT2Q8N6G5 542 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 TRIML1Q8N9V2 468 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 LINC00301Q8NCQ3 95 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 STMN4Q9H169 189 aaPredicted RBP14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 TRPM2O94759 1503 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 ZNF589Q86UQ0 364 aaPredicted RBP14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 SLC35F6Q8N357 371 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 POLR3EQ9NVU0 708 aa14.72□□□□□ -0.05
PCDHGB3-201ENST00000576222 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms