RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.16■□□□□ 0.02
NSMCE1-214ENST00000569236 IREB2P48200 963 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-214ENST00000569236 MAP3K11Q16584 847 aa15.15■□□□□ 0.02
NSMCE1-214ENST00000569236 TEX11Q8IYF3 940 aa15.15■□□□□ 0.02
NSMCE1-214ENST00000569236 SH3RF3Q8TEJ3 882 aaPredicted RBP15.15■□□□□ 0.02
NSMCE1-214ENST00000569236 CCDC102AQ96A19 550 aa15.15■□□□□ 0.02
NSMCE1-214ENST00000569236 LNPKQ9C0E8 428 aa15.15■□□□□ 0.02
NSMCE1-214ENST00000569236 GLRX3O76003 335 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-214ENST00000569236 PDE6AP16499 860 aa15.14■□□□□ 0.01
NSMCE1-214ENST00000569236 CERS3Q8IU89 383 aa15.14■□□□□ 0.01
NSMCE1-214ENST00000569236 MIGA1Q8NAN2 632 aa15.14■□□□□ 0.01
NSMCE1-214ENST00000569236 DDX4Q9NQI0 724 aaKnown RBP15.14■□□□□ 0.01
NSMCE1-214ENST00000569236 MYH7P12883 1935 aa15.14■□□□□ 0.01
NSMCE1-214ENST00000569236 SALL3Q9BXA9 1300 aa15.14■□□□□ 0.01
NSMCE1-214ENST00000569236 USP2O75604 605 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 LDLRAD1Q5T700 205 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 DCAF15Q66K64 600 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 CHD1LQ86WJ1 897 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 ZSCAN29Q8IWY8 852 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 ZFPM1Q8IX07 1006 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 PI4K2BQ8TCG2 481 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 ZNF532Q9HCE3 1301 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 UNCXA6NJT0 531 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 DYNLL1P63167 89 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 NOGQ13253 232 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 ZSCAN25Q6NSZ9 544 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 CSRNP1Q96S65 589 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 CDK5RAP2Q96SN8 1893 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 THSD7BQ9C0I4 1608 aa15.13■□□□□ 0.01
NSMCE1-214ENST00000569236 AOC2O75106 756 aa15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 SLC10A3P09131 477 aa15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 MAP2K2P36507 400 aa15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 MIGA2Q7L4E1 593 aa15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 RASAL3Q86YV0 1011 aa15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 ANKRD13AQ8IZ07 590 aa15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 OSBPL5Q9H0X9 879 aaPredicted RBP15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 FOCADQ5VW36 1801 aa15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 OTOFQ9HC10 1997 aa15.12■□□□□ 0.01
NSMCE1-214ENST00000569236 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 FAM155AB1AL88 458 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 ADD2P35612 726 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 PDE1AP54750 535 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 KBTBD3Q8NAB2 608 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 TGFBRAP1Q8WUH2 860 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 STAP2Q9UGK3 403 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 ATRNL1Q5VV63 1379 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 DDTLA6NHG4 134 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 UBE3CQ15386 1083 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 SLC10A4Q96EP9 437 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 ZNF341Q9BYN7 854 aa15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-214ENST00000569236 FLT1P17948 1338 aa15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 COL2A1P02458 1487 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 USP5P45974 858 aa15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 MAP3K9P80192 1104 aa15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 MAPKAPK5Q8IW41 473 aa15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 DDRGK1Q96HY6 314 aa15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 CLMNQ96JQ2 1002 aa15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 WRNIP1Q96S55 665 aa15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 RIOK1Q9BRS2 568 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-214ENST00000569236 MAP2K1Q02750 393 aaPredicted RBP15.09■□□□□ 0.01
NSMCE1-214ENST00000569236 DHX36Q9H2U1 1008 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-214ENST00000569236 CSADQ9Y600 493 aa15.09■□□□□ 0.01
NSMCE1-214ENST00000569236 VGLL4Q14135 290 aa15.08■□□□□ 0.01
NSMCE1-214ENST00000569236 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0.01
NSMCE1-214ENST00000569236 SLFNL1Q499Z3 407 aa15.08■□□□□ 0.01
NSMCE1-214ENST00000569236 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.08■□□□□ 0.01
NSMCE1-214ENST00000569236 CHGBP05060 677 aa15.08■□□□□ 0
NSMCE1-214ENST00000569236 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0
NSMCE1-214ENST00000569236 KIF23Q02241 960 aaPredicted RBP15.08■□□□□ 0
NSMCE1-214ENST00000569236 ZIC5Q96T25 663 aa15.08■□□□□ 0
NSMCE1-214ENST00000569236 FSD1Q9BTV5 496 aa15.08■□□□□ 0
NSMCE1-214ENST00000569236 CRNKL1Q9BZJ0 848 aaKnown RBP15.08■□□□□ 0
NSMCE1-214ENST00000569236 ELP3Q9H9T3 547 aa15.08■□□□□ 0
NSMCE1-214ENST00000569236 RNF113AO15541 343 aaKnown RBP15.07■□□□□ 0
NSMCE1-214ENST00000569236 MBD4O95243 580 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 MKRN3Q13064 507 aaKnown RBP15.07■□□□□ 0
NSMCE1-214ENST00000569236 SPRYD7Q5W111 196 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 LCORLQ8N3X6 602 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 ZKSCAN4Q969J2 545 aaPredicted RBP15.07■□□□□ 0
NSMCE1-214ENST00000569236 AIDAQ96BJ3 306 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 ANP32EQ9BTT0 268 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 BEGAINQ9BUH8 593 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 ARMT1Q9H993 441 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 MYH1P12882 1939 aa15.07■□□□□ 0
NSMCE1-214ENST00000569236 HSPA1AP0DMV8 641 aaKnown RBP15.06■□□□□ 0
NSMCE1-214ENST00000569236 HSPA1BP0DMV9 641 aaKnown RBP15.06■□□□□ 0
NSMCE1-214ENST00000569236 ZBTB48P10074 688 aaPredicted RBP15.06■□□□□ 0
NSMCE1-214ENST00000569236 MAP3K10Q02779 954 aa15.06■□□□□ 0
NSMCE1-214ENST00000569236 PLEKHM2Q8IWE5 1019 aa15.06■□□□□ 0
NSMCE1-214ENST00000569236 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
NSMCE1-214ENST00000569236 EVI5LQ96CN4 794 aa15.06■□□□□ 0
NSMCE1-214ENST00000569236 WNK4Q96J92 1243 aa15.06■□□□□ 0
NSMCE1-214ENST00000569236 OSBPL3Q9H4L5 887 aa15.06■□□□□ 0
NSMCE1-214ENST00000569236 WBP1LQ9NX94 342 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms