RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RNF113AO15541 343 aaKnown RBP13.84□□□□□ -0.19
KARS-207ENST00000566560 CHGBP05060 677 aa13.84□□□□□ -0.19
KARS-207ENST00000566560 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
KARS-207ENST00000566560 UBE3CQ15386 1083 aa13.84□□□□□ -0.19
KARS-207ENST00000566560 NBPF9Q3BBW0 867 aa13.84□□□□□ -0.19
KARS-207ENST00000566560 APOBEC3HQ6NTF7 200 aaKnown RBP13.84□□□□□ -0.19
KARS-207ENST00000566560 MIGA1Q8NAN2 632 aa13.84□□□□□ -0.19
KARS-207ENST00000566560 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
KARS-207ENST00000566560 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
KARS-207ENST00000566560 GPR75-ASB3A0A0A6YYF3 556 aa13.83□□□□□ -0.2
KARS-207ENST00000566560 CLRN2A0PK11 232 aa13.83□□□□□ -0.2
KARS-207ENST00000566560 HIRAP54198 1017 aaPredicted RBP13.83□□□□□ -0.2
KARS-207ENST00000566560 SLFNL1Q499Z3 407 aa13.83□□□□□ -0.2
KARS-207ENST00000566560 SLC39A7Q92504 469 aa13.83□□□□□ -0.2
KARS-207ENST00000566560 APPBP2Q92624 585 aa13.83□□□□□ -0.2
KARS-207ENST00000566560 PRMT6Q96LA8 375 aaPredicted RBP13.83□□□□□ -0.2
KARS-207ENST00000566560 DIAPH3Q9NSV4 1193 aa13.83□□□□□ -0.2
KARS-207ENST00000566560 TMOD2Q9NZR1 351 aa13.83□□□□□ -0.2
KARS-207ENST00000566560 DDX60LQ5H9U9 1706 aaKnown RBP13.83□□□□□ -0.2
KARS-207ENST00000566560 ASTN2O75129 1339 aaPredicted RBP13.83□□□□□ -0.2
KARS-207ENST00000566560 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
KARS-207ENST00000566560 MAGEB6P1A0A0J9YX57 407 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 PPP1R37O75864 691 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 BAG3O95817 575 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 PLCG2P16885 1265 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 ANGEL2Q5VTE6 544 aaKnown RBP13.82□□□□□ -0.2
KARS-207ENST00000566560 LDHDQ86WU2 507 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 CERS3Q8IU89 383 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 TDRD3Q9H7E2 651 aaKnown RBP13.82□□□□□ -0.2
KARS-207ENST00000566560 VEZTQ9HBM0 779 aa13.82□□□□□ -0.2
KARS-207ENST00000566560 HIP1O00291 1037 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 KIF3CO14782 793 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 MBD4O95243 580 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 CACNB3P54284 484 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 DYNLL1P63167 89 aaKnown RBP13.81□□□□□ -0.2
KARS-207ENST00000566560 ZMYM1Q5SVZ6 1142 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 CDC42EP5Q6NZY7 148 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 APOBEC3FQ8IUX4 373 aaKnown RBP13.81□□□□□ -0.2
KARS-207ENST00000566560 ZC3H15Q8WU90 426 aaKnown RBP13.81□□□□□ -0.2
KARS-207ENST00000566560 AIDAQ96BJ3 306 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 ZNF70Q9UC06 446 aaPredicted RBP13.81□□□□□ -0.2
KARS-207ENST00000566560 PITPNM2Q9BZ72 1349 aa13.81□□□□□ -0.2
KARS-207ENST00000566560 A0A0D9SFI3 127 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 M0R2C6 588 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 C7P10643 843 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 RHBDL3P58872 404 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 PPP4CP60510 307 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 NMIQ13287 307 aaPredicted RBP13.8□□□□□ -0.2
KARS-207ENST00000566560 TNFAIP1Q13829 316 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 TEX11Q8IYF3 940 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 LCORLQ8N3X6 602 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 PDCD7Q8N8D1 485 aaKnown RBP13.8□□□□□ -0.2
KARS-207ENST00000566560 SH3RF3Q8TEJ3 882 aaPredicted RBP13.8□□□□□ -0.2
KARS-207ENST00000566560 OSBP2Q969R2 916 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 DCPSQ96C86 337 aaKnown RBP13.8□□□□□ -0.2
KARS-207ENST00000566560 RIOK1Q9BRS2 568 aaKnown RBP13.8□□□□□ -0.2
KARS-207ENST00000566560 PUS7LQ9H0K6 701 aaKnown RBP13.8□□□□□ -0.2
KARS-207ENST00000566560 ARMT1Q9H993 441 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 LAMB1P07942 1786 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 MYH1P12882 1939 aa13.8□□□□□ -0.2
KARS-207ENST00000566560 GPAA1O43292 621 aa13.79□□□□□ -0.2
KARS-207ENST00000566560 PICALMQ13492 652 aa13.79□□□□□ -0.2
KARS-207ENST00000566560 SULF1Q8IWU6 871 aa13.79□□□□□ -0.2
KARS-207ENST00000566560 FAM227BQ96M60 508 aa13.79□□□□□ -0.2
KARS-207ENST00000566560 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
KARS-207ENST00000566560 TCP10L2B9ZVM9 353 aa13.78□□□□□ -0.2
KARS-207ENST00000566560 CDC45O75419 566 aa13.78□□□□□ -0.2
KARS-207ENST00000566560 WDHD1O75717 1129 aaPredicted RBP13.78□□□□□ -0.2
KARS-207ENST00000566560 TNNI2P48788 182 aa13.78□□□□□ -0.2
KARS-207ENST00000566560 NFIAQ12857 509 aa13.78□□□□□ -0.2
KARS-207ENST00000566560 MAP1SQ66K74 1059 aaPredicted RBP13.78□□□□□ -0.2
KARS-207ENST00000566560 CWC27Q6UX04 472 aaKnown RBP13.78□□□□□ -0.2
KARS-207ENST00000566560 KRT26Q7Z3Y9 468 aa13.78□□□□□ -0.2
KARS-207ENST00000566560 SEC62Q99442 399 aaKnown RBP13.78□□□□□ -0.2
KARS-207ENST00000566560 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
KARS-207ENST00000566560 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
KARS-207ENST00000566560 SCAF8Q9UPN6 1271 aaKnown RBP13.78□□□□□ -0.2
KARS-207ENST00000566560 RAD50Q92878 1312 aa13.78□□□□□ -0.2
KARS-207ENST00000566560 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
KARS-207ENST00000566560 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 COL2A1P02458 1487 aaPredicted RBP13.77□□□□□ -0.21
KARS-207ENST00000566560 FLT1P17948 1338 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 CHMLP26374 656 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 USP5P45974 858 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 CNTNAP1P78357 1384 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 FKBP1CQ5VVH2 108 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 CASC1Q6TDU7 716 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 CCDC171Q6TFL3 1326 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 IDI2Q9BXS1 227 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 PGAP2Q9UHJ9 254 aa13.77□□□□□ -0.21
KARS-207ENST00000566560 TRPM7Q96QT4 1865 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 SEC24BO95487 1268 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 TCP10Q12799 353 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 MCMDC2Q4G0Z9 681 aa13.76□□□□□ -0.21
KARS-207ENST00000566560 ZNF589Q86UQ0 364 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms