RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PRKAG2Q9UGJ0 569 aa8.68□□□□□ -1.02
UBR1-205ENST00000564540 DAGLAQ9Y4D2 1042 aa8.68□□□□□ -1.02
UBR1-205ENST00000564540 PRR19A6NJB7 356 aa8.67□□□□□ -1.02
UBR1-205ENST00000564540 F13BP05160 661 aa8.67□□□□□ -1.02
UBR1-205ENST00000564540 SSTR4P31391 388 aa8.67□□□□□ -1.02
UBR1-205ENST00000564540 XPCQ01831 940 aaPredicted RBP8.67□□□□□ -1.02
UBR1-205ENST00000564540 MEI1Q5TIA1 1274 aa8.67□□□□□ -1.02
UBR1-205ENST00000564540 ACSBG1Q96GR2 724 aa8.67□□□□□ -1.02
UBR1-205ENST00000564540 CACNA2D2Q9NY47 1150 aa8.67□□□□□ -1.02
UBR1-205ENST00000564540 SAMM50Q9Y512 469 aa8.67□□□□□ -1.02
UBR1-205ENST00000564540 ZBTB7CA1YPR0 619 aa8.66□□□□□ -1.02
UBR1-205ENST00000564540 MED26O95402 600 aa8.66□□□□□ -1.02
UBR1-205ENST00000564540 TTLL4Q14679 1199 aa8.66□□□□□ -1.02
UBR1-205ENST00000564540 LLGL2Q6P1M3 1020 aa8.66□□□□□ -1.02
UBR1-205ENST00000564540 SV2BQ7L1I2 683 aa8.66□□□□□ -1.02
UBR1-205ENST00000564540 TBC1D32Q96NH3 1257 aa8.66□□□□□ -1.02
UBR1-205ENST00000564540 ATXN3LQ9H3M9 355 aa8.66□□□□□ -1.02
UBR1-205ENST00000564540 HCLS1P14317 486 aaPredicted RBP8.65□□□□□ -1.02
UBR1-205ENST00000564540 ERCC3P19447 782 aa8.65□□□□□ -1.02
UBR1-205ENST00000564540 HNRNPUQ00839 825 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBR1-205ENST00000564540 MAP7Q14244 749 aa8.65□□□□□ -1.02
UBR1-205ENST00000564540 CCDC85BQ15834 202 aaPredicted RBP8.65□□□□□ -1.02
UBR1-205ENST00000564540 ZC3H12AQ5D1E8 599 aaKnown RBP8.65□□□□□ -1.02
UBR1-205ENST00000564540 TMC4Q7Z404 712 aa8.65□□□□□ -1.02
UBR1-205ENST00000564540 GATA6Q92908 595 aa8.65□□□□□ -1.02
UBR1-205ENST00000564540 PIDD1Q9HB75 910 aa8.65□□□□□ -1.02
UBR1-205ENST00000564540 TRIM37O94972 964 aa8.64□□□□□ -1.03
UBR1-205ENST00000564540 CTSHP09668 335 aa8.64□□□□□ -1.03
UBR1-205ENST00000564540 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
UBR1-205ENST00000564540 ZAR1Q86SH2 424 aa8.64□□□□□ -1.03
UBR1-205ENST00000564540 C1GALT1Q9NS00 363 aa8.64□□□□□ -1.03
UBR1-205ENST00000564540 PCMTD2Q9NV79 361 aa8.64□□□□□ -1.03
UBR1-205ENST00000564540 CSADQ9Y600 493 aa8.64□□□□□ -1.03
UBR1-205ENST00000564540 FAM170BA6NMN3 283 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 RNGTTO60942 597 aaKnown RBP8.63□□□□□ -1.03
UBR1-205ENST00000564540 NEFMP07197 916 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 CD97P48960 835 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 PTPN11Q06124 597 aaPredicted RBP8.63□□□□□ -1.03
UBR1-205ENST00000564540 LRRC14Q15048 493 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 MAP3K11Q16584 847 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 TTBK2Q6IQ55 1244 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 ATG3Q9NT62 314 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 PCDHA4Q9UN74 947 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 CYP8B1Q9UNU6 501 aa8.63□□□□□ -1.03
UBR1-205ENST00000564540 DCDC2CA8MYV0 355 aa8.62□□□□□ -1.03
UBR1-205ENST00000564540 HOXA10P31260 410 aaPredicted RBP8.62□□□□□ -1.03
UBR1-205ENST00000564540 TMCO4Q5TGY1 634 aa8.62□□□□□ -1.03
UBR1-205ENST00000564540 SMYD4Q8IYR2 804 aaPredicted RBP8.62□□□□□ -1.03
UBR1-205ENST00000564540 OSBPL1AQ9BXW6 950 aa8.62□□□□□ -1.03
UBR1-205ENST00000564540 ERVK-24P63145 666 aa8.61□□□□□ -1.03
UBR1-205ENST00000564540 CDK5R2Q13319 367 aa8.61□□□□□ -1.03
UBR1-205ENST00000564540 PPM1JQ5JR12 505 aa8.61□□□□□ -1.03
UBR1-205ENST00000564540 C12orf40Q86WS4 652 aa8.61□□□□□ -1.03
UBR1-205ENST00000564540 BCL2L13Q9BXK5 485 aa8.61□□□□□ -1.03
UBR1-205ENST00000564540 PIM2Q9P1W9 311 aa8.61□□□□□ -1.03
UBR1-205ENST00000564540 SORBS3O60504 671 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 TAF1CQ15572 869 aaPredicted RBP8.6□□□□□ -1.03
UBR1-205ENST00000564540 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.6□□□□□ -1.03
UBR1-205ENST00000564540 ZNF765Q7L2R6 523 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 RNF214Q8ND24 703 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 GIMAP7Q8NHV1 300 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 GIPC2Q8TF65 315 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 GAL3ST3Q96A11 431 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 ISL2Q96A47 359 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 MRS2Q9HD23 443 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 VTI1BQ9UEU0 232 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 LEMD3Q9Y2U8 911 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 PCDHB5Q9Y5E4 795 aa8.6□□□□□ -1.03
UBR1-205ENST00000564540 NTF4P34130 210 aa8.59□□□□□ -1.03
UBR1-205ENST00000564540 INPP5AQ14642 412 aa8.59□□□□□ -1.03
UBR1-205ENST00000564540 GRIK1P39086 918 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 CDK8P49336 464 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 LIG3P49916 1009 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 IRAK1P51617 712 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 SEPT6Q14141 434 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 LRFN4Q6PJG9 635 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 UBE3DQ7Z6J8 389 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 CRELD1Q96HD1 420 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 METTL22Q9BUU2 404 aaPredicted RBP8.58□□□□□ -1.04
UBR1-205ENST00000564540 SSU72Q9NP77 194 aaKnown RBP8.58□□□□□ -1.04
UBR1-205ENST00000564540 PICK1Q9NRD5 415 aa8.58□□□□□ -1.04
UBR1-205ENST00000564540 KIAA1324LA8MWY0 1029 aaPredicted RBP8.57□□□□□ -1.04
UBR1-205ENST00000564540 F6X3S4 739 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 RING1Q06587 406 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 FZD5Q13467 585 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 INTS5Q6P9B9 1019 aaKnown RBP8.57□□□□□ -1.04
UBR1-205ENST00000564540 AGMOQ6ZNB7 445 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBR1-205ENST00000564540 ELMO3Q96BJ8 720 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 PLPPR2Q96GM1 343 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 KRTAP4-9Q9BYQ8 210 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 PCOLCE2Q9UKZ9 415 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 USP31Q70CQ4 1352 aa8.57□□□□□ -1.04
UBR1-205ENST00000564540 FAM87AP0C7U9 286 aa8.56□□□□□ -1.04
UBR1-205ENST00000564540 FOSL1P15407 271 aa8.56□□□□□ -1.04
UBR1-205ENST00000564540 SPINK2P20155 84 aa8.56□□□□□ -1.04
UBR1-205ENST00000564540 ST13P50502 369 aaKnown RBP8.56□□□□□ -1.04
UBR1-205ENST00000564540 RPS26P62854 115 aaKnown RBP8.56□□□□□ -1.04
UBR1-205ENST00000564540 ZBTB37Q5TC79 503 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms