RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 SPDYE5A6NIY4 337 aa23.22■■□□□ 1.31
TRADD-203ENST00000563348 BAG3O95817 575 aa23.22■■□□□ 1.31
TRADD-203ENST00000563348 IFIT2P09913 472 aaKnown RBP23.22■■□□□ 1.31
TRADD-203ENST00000563348 PPP4CP60510 307 aa23.22■■□□□ 1.31
TRADD-203ENST00000563348 PICALMQ13492 652 aa23.22■■□□□ 1.31
TRADD-203ENST00000563348 ERO1BQ86YB8 467 aa23.22■■□□□ 1.31
TRADD-203ENST00000563348 ZSCAN29Q8IWY8 852 aaPredicted RBP23.22■■□□□ 1.31
TRADD-203ENST00000563348 DDTLA6NHG4 134 aaPredicted RBP23.21■■□□□ 1.31
TRADD-203ENST00000563348 IGF2BP3O00425 579 aaKnown RBP eCLIP23.21■■□□□ 1.31
TRADD-203ENST00000563348 INPP5BP32019 993 aa23.21■■□□□ 1.31
TRADD-203ENST00000563348 MAP3K10Q02779 954 aa23.21■■□□□ 1.31
TRADD-203ENST00000563348 MS4A4AQ96JQ5 239 aa23.21■■□□□ 1.31
TRADD-203ENST00000563348 NOL10Q9BSC4 688 aaKnown RBP23.21■■□□□ 1.31
TRADD-203ENST00000563348 ATRNL1Q5VV63 1379 aa23.2■■□□□ 1.3
TRADD-203ENST00000563348 NOM1Q5C9Z4 860 aaKnown RBP23.2■■□□□ 1.3
TRADD-203ENST00000563348 TEX11Q8IYF3 940 aa23.2■■□□□ 1.3
TRADD-203ENST00000563348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.2■■□□□ 1.3
TRADD-203ENST00000563348 OTUD5Q96G74 571 aa23.2■■□□□ 1.3
TRADD-203ENST00000563348 PTPN18Q99952 460 aa23.2■■□□□ 1.3
TRADD-203ENST00000563348 NDUFB9Q9Y6M9 179 aa23.2■■□□□ 1.3
TRADD-203ENST00000563348 IDH1O75874 414 aaKnown RBP23.19■■□□□ 1.3
TRADD-203ENST00000563348 PLCG2P16885 1265 aa23.19■■□□□ 1.3
TRADD-203ENST00000563348 GTF2A2P52657 109 aa23.19■■□□□ 1.3
TRADD-203ENST00000563348 OTUD7BQ6GQQ9 843 aa23.19■■□□□ 1.3
TRADD-203ENST00000563348 ADGRA1Q86SQ6 560 aa23.19■■□□□ 1.3
TRADD-203ENST00000563348 SH3RF3Q8TEJ3 882 aaPredicted RBP23.19■■□□□ 1.3
TRADD-203ENST00000563348 ANTXR1Q9H6X2 564 aa23.19■■□□□ 1.3
TRADD-203ENST00000563348 AATFQ9NY61 560 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRADD-203ENST00000563348 AK9Q5TCS8 1911 aa23.19■■□□□ 1.3
TRADD-203ENST00000563348 GPR25O00155 361 aa23.18■■□□□ 1.3
TRADD-203ENST00000563348 CYP7A1P22680 504 aa23.18■■□□□ 1.3
TRADD-203ENST00000563348 LRRCC1Q9C099 1032 aa23.18■■□□□ 1.3
TRADD-203ENST00000563348 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
TRADD-203ENST00000563348 R3HDMLQ9H3Y0 253 aa23.18■■□□□ 1.3
TRADD-203ENST00000563348 DCTPP1Q9H773 170 aa23.18■■□□□ 1.3
TRADD-203ENST00000563348 OTOFQ9HC10 1997 aa23.18■■□□□ 1.3
TRADD-203ENST00000563348 PHF20L1A8MW92 1017 aa23.17■■□□□ 1.3
TRADD-203ENST00000563348 PPATQ06203 517 aa23.17■■□□□ 1.3
TRADD-203ENST00000563348 MAP3K12Q12852 859 aa23.17■■□□□ 1.3
TRADD-203ENST00000563348 PPIL2Q13356 520 aa23.17■■□□□ 1.3
TRADD-203ENST00000563348 NOL9Q5SY16 702 aaKnown RBP23.17■■□□□ 1.3
TRADD-203ENST00000563348 TMED8Q6PL24 325 aaPredicted RBP23.17■■□□□ 1.3
TRADD-203ENST00000563348 BRI3BPQ8WY22 251 aa23.17■■□□□ 1.3
TRADD-203ENST00000563348 OSBPL5Q9H0X9 879 aaPredicted RBP23.17■■□□□ 1.3
TRADD-203ENST00000563348 CCL15-CCL14A0A0B4J2E2 113 aa23.16■■□□□ 1.3
TRADD-203ENST00000563348 IRF6O14896 467 aa23.16■■□□□ 1.3
TRADD-203ENST00000563348 TBC1D12O60347 775 aa23.16■■□□□ 1.3
TRADD-203ENST00000563348 TTF1Q15361 905 aaPredicted RBP23.16■■□□□ 1.3
TRADD-203ENST00000563348 CCL15Q16663 113 aa23.16■■□□□ 1.3
TRADD-203ENST00000563348 ZNF296Q8WUU4 475 aaPredicted RBP23.16■■□□□ 1.3
TRADD-203ENST00000563348 ABHD8Q96I13 439 aa23.16■■□□□ 1.3
TRADD-203ENST00000563348 MCOLN1Q9GZU1 580 aa23.16■■□□□ 1.3
TRADD-203ENST00000563348 PCDHB15Q9Y5E8 787 aa23.16■■□□□ 1.3
TRADD-203ENST00000563348 CAPN15O75808 1086 aa23.15■■□□□ 1.3
TRADD-203ENST00000563348 DGKZQ13574 1117 aa23.15■■□□□ 1.3
TRADD-203ENST00000563348 MAGEB6Q8N7X4 407 aa23.15■■□□□ 1.3
TRADD-203ENST00000563348 SMARCA5O60264 1052 aaPredicted RBP23.14■■□□□ 1.29
TRADD-203ENST00000563348 SLURP2P0DP57 97 aa23.14■■□□□ 1.29
TRADD-203ENST00000563348 CETPP11597 493 aa23.14■■□□□ 1.29
TRADD-203ENST00000563348 ATP5JP18859 108 aa23.14■■□□□ 1.29
TRADD-203ENST00000563348 SNAPC2Q13487 334 aa23.14■■□□□ 1.29
TRADD-203ENST00000563348 TGFBRAP1Q8WUH2 860 aa23.14■■□□□ 1.29
TRADD-203ENST00000563348 DYNLL1P63167 89 aaKnown RBP23.13■■□□□ 1.29
TRADD-203ENST00000563348 CERS3Q8IU89 383 aa23.13■■□□□ 1.29
TRADD-203ENST00000563348 COL2A1P02458 1487 aaPredicted RBP23.12■■□□□ 1.29
TRADD-203ENST00000563348 GOLIM4O00461 696 aa23.12■■□□□ 1.29
TRADD-203ENST00000563348 CTNND1O60716 968 aaKnown RBP23.12■■□□□ 1.29
TRADD-203ENST00000563348 FKTNO75072 461 aa23.12■■□□□ 1.29
TRADD-203ENST00000563348 CTU1Q7Z7A3 348 aaKnown RBP23.12■■□□□ 1.29
TRADD-203ENST00000563348 SCYL3Q8IZE3 742 aa23.12■■□□□ 1.29
TRADD-203ENST00000563348 CRBNQ96SW2 442 aa23.12■■□□□ 1.29
TRADD-203ENST00000563348 DNAJC2Q99543 621 aaKnown RBP23.12■■□□□ 1.29
TRADD-203ENST00000563348 DHX36Q9H2U1 1008 aaKnown RBP23.12■■□□□ 1.29
TRADD-203ENST00000563348 BOLA2Q9H3K6 86 aa23.12■■□□□ 1.29
TRADD-203ENST00000563348 KCNH4Q9UQ05 1017 aa23.12■■□□□ 1.29
TRADD-203ENST00000563348 MYO5AQ9Y4I1 1855 aaKnown RBP23.11■■□□□ 1.29
TRADD-203ENST00000563348 CRHR2Q13324 411 aa23.11■■□□□ 1.29
TRADD-203ENST00000563348 MAPKAPK5Q8IW41 473 aa23.11■■□□□ 1.29
TRADD-203ENST00000563348 FAM43AQ8N2R8 423 aa23.11■■□□□ 1.29
TRADD-203ENST00000563348 MIGA1Q8NAN2 632 aa23.11■■□□□ 1.29
TRADD-203ENST00000563348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.11■■□□□ 1.29
TRADD-203ENST00000563348 PICK1Q9NRD5 415 aa23.11■■□□□ 1.29
TRADD-203ENST00000563348 PI4KBQ9UBF8 816 aa23.11■■□□□ 1.29
TRADD-203ENST00000563348 LAMB1P07942 1786 aa23.1■■□□□ 1.29
TRADD-203ENST00000563348 CXCL11O14625 94 aa23.1■■□□□ 1.29
TRADD-203ENST00000563348 SLC9C2Q5TAH2 1124 aa23.1■■□□□ 1.29
TRADD-203ENST00000563348 FLT1P17948 1338 aa23.09■■□□□ 1.29
TRADD-203ENST00000563348 PDE6AP16499 860 aa23.09■■□□□ 1.29
TRADD-203ENST00000563348 PTPRAP18433 802 aa23.09■■□□□ 1.29
TRADD-203ENST00000563348 EDC3Q96F86 508 aaKnown RBP23.09■■□□□ 1.29
TRADD-203ENST00000563348 HAUS7Q99871 368 aa23.09■■□□□ 1.29
TRADD-203ENST00000563348 ZCCHC17Q9NP64 241 aaKnown RBP23.09■■□□□ 1.29
TRADD-203ENST00000563348 PAG1Q9NWQ8 432 aa23.09■■□□□ 1.29
TRADD-203ENST00000563348 HERC5Q9UII4 1024 aaKnown RBP23.09■■□□□ 1.29
TRADD-203ENST00000563348 ZHX2Q9Y6X8 837 aa23.09■■□□□ 1.29
TRADD-203ENST00000563348 FAM196BA6NMK8 535 aa23.08■■□□□ 1.29
TRADD-203ENST00000563348 BTBD19C9JJ37 291 aa23.08■■□□□ 1.29
TRADD-203ENST00000563348 TAF1CQ15572 869 aaPredicted RBP23.08■■□□□ 1.29
TRADD-203ENST00000563348 FOXP4Q8IVH2 680 aaPredicted RBP23.08■■□□□ 1.29
TRADD-203ENST00000563348 ZFYVE28Q9HCC9 887 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms