RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 HDAC1Q13547 482 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-211ENST00000557623 PRKG1Q13976 671 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 MOB2Q70IA6 237 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 FAM151AQ8WW52 585 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 TEPSINQ96N21 525 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 PIH1D3Q9NQM4 214 aaKnown RBP15.21■□□□□ 0.03
SLIRP-211ENST00000557623 OTOFQ9HC10 1997 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 FOCADQ5VW36 1801 aa15.21■□□□□ 0.03
SLIRP-211ENST00000557623 IDH1O75874 414 aaKnown RBP15.2■□□□□ 0.02
SLIRP-211ENST00000557623 BAG3O95817 575 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 SLC10A3P09131 477 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 ATP5JP18859 108 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 ZNF384Q8TF68 577 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 IDI2Q9BXS1 227 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 PCDHB8Q9UN66 801 aa15.2■□□□□ 0.02
SLIRP-211ENST00000557623 FAM155AB1AL88 458 aaPredicted RBP15.19■□□□□ 0.02
SLIRP-211ENST00000557623 ENTPD3O75355 529 aa15.19■□□□□ 0.02
SLIRP-211ENST00000557623 PLCG2P16885 1265 aa15.19■□□□□ 0.02
SLIRP-211ENST00000557623 TCP10Q12799 353 aa15.19■□□□□ 0.02
SLIRP-211ENST00000557623 LDLRAD1Q5T700 205 aa15.19■□□□□ 0.02
SLIRP-211ENST00000557623 AIDAQ96BJ3 306 aa15.19■□□□□ 0.02
SLIRP-211ENST00000557623 RWDD1Q9H446 243 aaPredicted RBP15.19■□□□□ 0.02
SLIRP-211ENST00000557623 LAMB1P07942 1786 aa15.19■□□□□ 0.02
SLIRP-211ENST00000557623 AOC2O75106 756 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 USP2O75604 605 aaPredicted RBP15.18■□□□□ 0.02
SLIRP-211ENST00000557623 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
SLIRP-211ENST00000557623 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
SLIRP-211ENST00000557623 RGS3P49796 1198 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 RHBDL3P58872 404 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 NFIAQ12857 509 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 DCAF15Q66K64 600 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 RASAL3Q86YV0 1011 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 CERS3Q8IU89 383 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 ANKRD13AQ8IZ07 590 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 DNAJC2Q99543 621 aaKnown RBP15.18■□□□□ 0.02
SLIRP-211ENST00000557623 BEGAINQ9BUH8 593 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 FAM198AQ9UFP1 575 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 NDUFB9Q9Y6M9 179 aa15.18■□□□□ 0.02
SLIRP-211ENST00000557623 RFX7Q2KHR2 1363 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 WDHD1O75717 1129 aaPredicted RBP15.17■□□□□ 0.02
SLIRP-211ENST00000557623 CYP7A1P22680 504 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 PPP4CP60510 307 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 MAGEB6Q8N7X4 407 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 SLC10A4Q96EP9 437 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 HAUS7Q99871 368 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 BOLA2Q9H3K6 86 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 PAG1Q9NWQ8 432 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 WBP1LQ9NX94 342 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 AATFQ9NY61 560 aaKnown RBP eCLIP15.17■□□□□ 0.02
SLIRP-211ENST00000557623 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
SLIRP-211ENST00000557623 GOLIM4O00461 696 aa15.16■□□□□ 0.02
SLIRP-211ENST00000557623 TIE1P35590 1138 aa15.16■□□□□ 0.02
SLIRP-211ENST00000557623 ZSCAN29Q8IWY8 852 aaPredicted RBP15.16■□□□□ 0.02
SLIRP-211ENST00000557623 CDAN1Q8IWY9 1227 aa15.16■□□□□ 0.02
SLIRP-211ENST00000557623 TEX11Q8IYF3 940 aa15.16■□□□□ 0.02
SLIRP-211ENST00000557623 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
SLIRP-211ENST00000557623 MYH1P12882 1939 aa15.15■□□□□ 0.02
SLIRP-211ENST00000557623 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
SLIRP-211ENST00000557623 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
SLIRP-211ENST00000557623 PICALMQ13492 652 aa15.15■□□□□ 0.02
SLIRP-211ENST00000557623 ANKRD45Q5TZF3 282 aa15.15■□□□□ 0.02
SLIRP-211ENST00000557623 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
SLIRP-211ENST00000557623 CSADQ9Y600 493 aa15.15■□□□□ 0.02
SLIRP-211ENST00000557623 TTC41PQ6P2S7 1318 aa15.15■□□□□ 0.02
SLIRP-211ENST00000557623 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
SLIRP-211ENST00000557623 ERC2O15083 957 aa15.14■□□□□ 0.01
SLIRP-211ENST00000557623 CA12O43570 354 aa15.14■□□□□ 0.01
SLIRP-211ENST00000557623 SLC9C2Q5TAH2 1124 aa15.14■□□□□ 0.01
SLIRP-211ENST00000557623 ADGRA1Q86SQ6 560 aa15.14■□□□□ 0.01
SLIRP-211ENST00000557623 ZFPM1Q8IX07 1006 aa15.14■□□□□ 0.01
SLIRP-211ENST00000557623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.011e-8■■■■■ 34
SLIRP-211ENST00000557623 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
SLIRP-211ENST00000557623 CSRNP1Q96S65 589 aa15.14■□□□□ 0.01
SLIRP-211ENST00000557623 DDX4Q9NQI0 724 aaKnown RBP15.14■□□□□ 0.01
SLIRP-211ENST00000557623 TRPC6Q9Y210 931 aa15.14■□□□□ 0.01
SLIRP-211ENST00000557623 ATRNL1Q5VV63 1379 aa15.13■□□□□ 0.01
SLIRP-211ENST00000557623 ZBTB48P10074 688 aaPredicted RBP15.13■□□□□ 0.01
SLIRP-211ENST00000557623 PDE6AP16499 860 aa15.13■□□□□ 0.01
SLIRP-211ENST00000557623 SPRYD7Q5W111 196 aa15.13■□□□□ 0.01
SLIRP-211ENST00000557623 ZSCAN25Q6NSZ9 544 aa15.13■□□□□ 0.01
SLIRP-211ENST00000557623 MIGA2Q7L4E1 593 aa15.13■□□□□ 0.01
SLIRP-211ENST00000557623 CLMNQ96JQ2 1002 aa15.13■□□□□ 0.01
SLIRP-211ENST00000557623 WRNIP1Q96S55 665 aa15.13■□□□□ 0.01
SLIRP-211ENST00000557623 OSBPL5Q9H0X9 879 aaPredicted RBP15.13■□□□□ 0.01
SLIRP-211ENST00000557623 CTCFP49711 727 aaPredicted RBP15.12■□□□□ 0.01
SLIRP-211ENST00000557623 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
SLIRP-211ENST00000557623 SMC5Q8IY18 1101 aa15.12■□□□□ 0.01
SLIRP-211ENST00000557623 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
SLIRP-211ENST00000557623 EDC3Q96F86 508 aaKnown RBP15.12■□□□□ 0.01
SLIRP-211ENST00000557623 WNK4Q96J92 1243 aa15.12■□□□□ 0.01
SLIRP-211ENST00000557623 ZIC5Q96T25 663 aa15.12■□□□□ 0.01
SLIRP-211ENST00000557623 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
SLIRP-211ENST00000557623 ZNF532Q9HCE3 1301 aa15.12■□□□□ 0.01
SLIRP-211ENST00000557623 NAV1Q8NEY1 1877 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms