RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 KCNJ14Q9UNX9 436 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 OPA1O60313 960 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 CYP26C1Q6V0L0 522 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 VPS36Q86VN1 386 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 MICALL1Q8N3F8 863 aa17.01■□□□□ 0.31
ARHGEF40-207ENST00000556399 ASIC1P78348 528 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 CALM1P0DP23 149 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 CALM2P0DP24 149 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 CALM3P0DP25 149 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 SERTAD1Q9UHV2 236 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 CTDP1Q9Y5B0 961 aaPredicted RBP17■□□□□ 0.31
ARHGEF40-207ENST00000556399 CARMIL3Q8ND23 1372 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 ADD1P35611 737 aaKnown RBP17■□□□□ 0.31
ARHGEF40-207ENST00000556399 TTC31Q49AM3 519 aaPredicted RBP17■□□□□ 0.31
ARHGEF40-207ENST00000556399 CCDC152Q4G0S7 254 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 PGBD1Q96JS3 809 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 VAT1LQ9HCJ6 419 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 ATP10DQ9P241 1426 aa17■□□□□ 0.31
ARHGEF40-207ENST00000556399 TOB2Q14106 344 aaPredicted RBP17■□□□□ 0.31
ARHGEF40-207ENST00000556399 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
ARHGEF40-207ENST00000556399 MAGEB6P1A0A0J9YX57 407 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 TMCO5BA8MYB1 307 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 EBAG9O00559 213 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 GPATCH11Q8N954 259 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 NEK11Q8NG66 645 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 A1BGP04217 495 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 PLA2G4DQ86XP0 818 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 ARMT1Q9H993 441 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 NOP2P46087 812 aaKnown RBP16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 WWC2Q6AWC2 1192 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 CLIC6Q96NY7 704 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 MMRN2Q9H8L6 949 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 TRIM14Q14142 442 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 TMTC1Q8IUR5 882 aa16.99■□□□□ 0.31
ARHGEF40-207ENST00000556399 ITGA6P23229 1130 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 FBXO38Q6PIJ6 1188 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 FAM76AQ8TAV0 307 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 MAPK8IP1Q9UQF2 711 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 ZSCAN26Q16670 478 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 SARM1Q6SZW1 724 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 UBA5Q9GZZ9 404 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 STX8Q9UNK0 236 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 FGAP02671 866 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 LONRF3Q496Y0 759 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 HEATR3Q7Z4Q2 680 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 LINC00301Q8NCQ3 95 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 AFAP1L1Q8TED9 768 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 KIAA1210Q9ULL0 1709 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 MACROD2A1Z1Q3 448 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 CALML3P27482 149 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 CTDSPL2Q05D32 466 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 ZNF827Q17R98 1081 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 DNAJC21Q5F1R6 531 aaKnown RBP16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 PLIN2Q99541 437 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 CCDC113Q9H0I3 377 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 POLR3EQ9NVU0 708 aa16.98■□□□□ 0.31
ARHGEF40-207ENST00000556399 KRT9P35527 623 aa16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 BRD3Q15059 726 aa16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 CCDC144BQ3MJ40 725 aa16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 GOLGA8FQ08AF8 430 aa16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 GOLGA8DPQ0D2H9 430 aa16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 NAA30Q147X3 362 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 ORAI2Q96SN7 254 aa16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 PPP1R12BO60237 982 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 ZMYM1Q5SVZ6 1142 aa16.97■□□□□ 0.31
ARHGEF40-207ENST00000556399 ARHGAP31Q2M1Z3 1444 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 TAB2Q9NYJ8 693 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 BICDL2A1A5D9 508 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 SEC31AO94979 1220 aaKnown RBP16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 LRRC24Q50LG9 513 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 DTHD1Q6ZMT9 781 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 SLF1Q9BQI6 1058 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 DDX41Q9UJV9 622 aaKnown RBP16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 IKBKBO14920 756 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 PAK1Q13153 545 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 SLC39A14Q15043 492 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 NOSTRINQ8IVI9 506 aa16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 V9GY48 417 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF40-207ENST00000556399 ZMYM6O95789 1325 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 PTPN21Q16825 1174 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 STAMQ92783 540 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 ANKIB1Q9P2G1 1089 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 PCDHA5Q9Y5H7 936 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 ZNF76P36508 570 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 PHLPP2Q6ZVD8 1323 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 CLCN6P51797 869 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 TCERG1LQ5VWI1 586 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 FCHSD1Q86WN1 690 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 ATRIPQ8WXE1 791 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 WWC3Q9ULE0 1092 aa16.95■□□□□ 0.3
ARHGEF40-207ENST00000556399 STX10O60499 249 aa16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
ARHGEF40-207ENST00000556399 ALKQ9UM73 1620 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms