RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PAK2Q13177 524 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 NOC4LQ9BVI4 516 aaKnown RBP17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 SAR1BQ9Y6B6 198 aa17.74■□□□□ 0.43
RBFOX1-212ENST00000550418 CCDC160A6NGH7 325 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 TBCAO75347 108 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 PCK1P35558 622 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 ACTN2P35609 894 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 GNGT1P63211 74 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 POSTNQ15063 836 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 DTHD1Q6ZMT9 781 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 TBX22Q9Y458 520 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 PPP1R14CQ8TAE6 165 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 LMNTD2Q8IXW0 634 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 SYCP3Q8IZU3 236 aa17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 IQCGQ9H095 443 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-212ENST00000550418 CALM1P0DP23 149 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 CALM2P0DP24 149 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 CALM3P0DP25 149 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 BICDL1Q6ZP65 573 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 TRMT44Q8IYL2 757 aaKnown RBP17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 PPP1R13BQ96KQ4 1090 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 TRIM7Q9C029 511 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 INTS8Q75QN2 995 aaKnown RBP17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 CCDC25Q86WR0 208 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 CCDC51Q96ER9 411 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 SMC6Q96SB8 1091 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 GIGYF1O75420 1035 aaPredicted RBP17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 CYP7A1P22680 504 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 ZSWIM6Q9HCJ5 1215 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 SPTLC3Q9NUV7 552 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 RBM5P52756 815 aaKnown RBP eCLIP17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 PDLIM2Q96JY6 352 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 TPCN1Q9ULQ1 816 aa17.72■□□□□ 0.43
RBFOX1-212ENST00000550418 SEC31AO94979 1220 aaKnown RBP17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 CALCOCO2Q13137 446 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 PAK1Q13153 545 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 CEP85LQ5SZL2 805 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 HEATR3Q7Z4Q2 680 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 DIS3L2Q8IYB7 885 aaKnown RBP17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 NUP58Q9BVL2 599 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 RTL9Q8NET4 1388 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 E7EVH7 732 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 AKAP4Q5JQC9 854 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 FMNL3Q8IVF7 1028 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 BANK1Q8NDB2 785 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 TAB2Q9NYJ8 693 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 BAIAP2L1Q9UHR4 511 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 NSFL1CQ9UNZ2 370 aaKnown RBP17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 ALDH3A1P30838 453 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 PPP1R2P41236 205 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 MAPK8IP1Q9UQF2 711 aa17.71■□□□□ 0.43
RBFOX1-212ENST00000550418 IL13P35225 146 aa17.71■□□□□ 0.42
RBFOX1-212ENST00000550418 ZNF174Q15697 407 aa17.71■□□□□ 0.42
RBFOX1-212ENST00000550418 NOX5Q96PH1 765 aa17.71■□□□□ 0.42
RBFOX1-212ENST00000550418 ANGEL1Q9UNK9 670 aaKnown RBP17.71■□□□□ 0.42
RBFOX1-212ENST00000550418 ZNF652Q9Y2D9 606 aa17.71■□□□□ 0.42
RBFOX1-212ENST00000550418 RNASE9P60153 205 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 LONRF2Q1L5Z9 754 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 CRNKL1Q9BZJ0 848 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 NKIRAS1Q9NYS0 192 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 HNRNPH2P55795 449 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 CUL5Q93034 780 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 ORAI2Q96SN7 254 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 ATP2A1O14983 1001 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 PPFIA4O75335 1185 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 PFKFB1P16118 471 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 MAGEA1P43355 309 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 RBM6P78332 1123 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 FBXO38Q6PIJ6 1188 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 SPATS2Q86XZ4 545 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 PAF1Q8N7H5 531 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 CAPS2Q9BXY5 557 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 SERPINA10Q9UK55 444 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 NEO1Q92859 1461 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 NCBP1Q09161 790 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 PNOCQ13519 176 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 KRT40Q6A162 431 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 PLIN2Q99541 437 aa17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 DDX41Q9UJV9 622 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-212ENST00000550418 CLCN6P51797 869 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 KRT79Q5XKE5 535 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 FCHSD1Q86WN1 690 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 CSGALNACT2Q8N6G5 542 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 EXOC4Q96A65 974 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 PSMB7Q99436 277 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 FLT4P35916 1363 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 CLGNO14967 610 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 GCP02774 474 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 PTH1RQ03431 593 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 ERMNQ8TAM6 284 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 DEXIO95424 95 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 DBNDD2Q9BQY9 259 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
RBFOX1-212ENST00000550418 STX10O60499 249 aa17.68■□□□□ 0.42
RBFOX1-212ENST00000550418 CFAP221Q4G0U5 840 aa17.68■□□□□ 0.42
RBFOX1-212ENST00000550418 TNNI3KQ59H18 835 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms