RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 RAB11FIP3O75154 756 aa24.32■■□□□ 1.48
CTDSP2-204ENST00000548823 CRKP46108 304 aa24.32■■□□□ 1.48
CTDSP2-204ENST00000548823 SLAIN1Q8ND83 568 aa24.32■■□□□ 1.48
CTDSP2-204ENST00000548823 C9orf78Q9NZ63 289 aaPredicted RBP24.32■■□□□ 1.48
CTDSP2-204ENST00000548823 STXBP5LQ9Y2K9 1186 aa24.32■■□□□ 1.48
CTDSP2-204ENST00000548823 ADGRA2Q96PE1 1338 aa24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 EIF5BO60841 1220 aaKnown RBP24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 BMP8BP34820 402 aa24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 PPATQ06203 517 aa24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 DEFB123Q8N688 67 aa24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 TDRD7Q8NHU6 1098 aaKnown RBP24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 HOOK2Q96ED9 719 aa24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 UNC93B1Q9H1C4 597 aa24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 OSBPL3Q9H4L5 887 aa24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 UPF2Q9HAU5 1272 aaKnown RBP24.31■■□□□ 1.48
CTDSP2-204ENST00000548823 GRM8O00222 908 aa24.3■■□□□ 1.48
CTDSP2-204ENST00000548823 PDHXO00330 501 aa24.3■■□□□ 1.48
CTDSP2-204ENST00000548823 PRKCZQ05513 592 aa24.3■■□□□ 1.48
CTDSP2-204ENST00000548823 IFIT5Q13325 482 aaKnown RBP24.3■■□□□ 1.48
CTDSP2-204ENST00000548823 HSP90AB4PQ58FF6 505 aa24.29■■□□□ 1.48
CTDSP2-204ENST00000548823 LRRCC1Q9C099 1032 aa24.29■■□□□ 1.48
CTDSP2-204ENST00000548823 SEC24BO95487 1268 aa24.29■■□□□ 1.48
CTDSP2-204ENST00000548823 FCGRTP55899 365 aa24.29■■□□□ 1.48
CTDSP2-204ENST00000548823 GDF15Q99988 308 aa24.29■■□□□ 1.48
CTDSP2-204ENST00000548823 MGAMO43451 1857 aa24.28■■□□□ 1.48
CTDSP2-204ENST00000548823 TFRCP02786 760 aaKnown RBP24.28■■□□□ 1.48
CTDSP2-204ENST00000548823 TTC22Q5TAA0 569 aa24.28■■□□□ 1.48
CTDSP2-204ENST00000548823 NOP58Q9Y2X3 529 aaKnown RBP24.28■■□□□ 1.48
CTDSP2-204ENST00000548823 DCAF15Q66K64 600 aa24.27■■□□□ 1.48
CTDSP2-204ENST00000548823 FAM83AQ86UY5 434 aa24.27■■□□□ 1.48
CTDSP2-204ENST00000548823 COL25A1Q9BXS0 654 aaPredicted RBP24.27■■□□□ 1.48
CTDSP2-204ENST00000548823 SALL3Q9BXA9 1300 aa24.26■■□□□ 1.47
CTDSP2-204ENST00000548823 CACNB3P54284 484 aa24.26■■□□□ 1.47
CTDSP2-204ENST00000548823 HDLBPQ00341 1268 aaKnown RBP24.26■■□□□ 1.47
CTDSP2-204ENST00000548823 KCNH4Q9UQ05 1017 aa24.26■■□□□ 1.47
CTDSP2-204ENST00000548823 EXOC6BQ9Y2D4 811 aa24.26■■□□□ 1.47
CTDSP2-204ENST00000548823 ALPK3Q96L96 1907 aa24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 UNC80Q8N2C7 3258 aa24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 SRGAP3O43295 1099 aa24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 ADCY3O60266 1144 aa24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 BCRP11274 1271 aa24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 HIBADHP31937 336 aaKnown RBP24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 Q7L0L9 218 aa24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 MTMR10Q9NXD2 777 aa24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 GABRQQ9UN88 632 aa24.25■■□□□ 1.47
CTDSP2-204ENST00000548823 SMARCA5O60264 1052 aaPredicted RBP24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 FOXO4P98177 505 aa24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 LRIT3Q3SXY7 679 aa24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 FKBP1CQ5VVH2 108 aa24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 LDHAL6AQ6ZMR3 332 aa24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 TBC1D32Q96NH3 1257 aa24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 PARK7Q99497 189 aaKnown RBP24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 ZNF341Q9BYN7 854 aa24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 TMOD2Q9NZR1 351 aa24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 CHMP3Q9Y3E7 222 aa24.24■■□□□ 1.47
CTDSP2-204ENST00000548823 GYG1P46976 350 aa24.23■■□□□ 1.47
CTDSP2-204ENST00000548823 MOGSQ13724 837 aa24.23■■□□□ 1.47
CTDSP2-204ENST00000548823 UBE4AQ14139 1066 aa24.23■■□□□ 1.47
CTDSP2-204ENST00000548823 PXYLP1Q8TE99 480 aa24.23■■□□□ 1.47
CTDSP2-204ENST00000548823 FAM84BQ96KN1 310 aaPredicted RBP24.23■■□□□ 1.47
CTDSP2-204ENST00000548823 DEFB118Q96PH6 123 aa24.23■■□□□ 1.47
CTDSP2-204ENST00000548823 TEKT1Q969V4 418 aa24.22■■□□□ 1.47
CTDSP2-204ENST00000548823 KIF1BPQ96EK5 621 aa24.22■■□□□ 1.47
CTDSP2-204ENST00000548823 PAWRQ96IZ0 340 aaKnown RBP24.22■■□□□ 1.47
CTDSP2-204ENST00000548823 CRISPLD2Q9H0B8 497 aa24.22■■□□□ 1.47
CTDSP2-204ENST00000548823 PAK6Q9NQU5 681 aaPredicted RBP24.22■■□□□ 1.47
CTDSP2-204ENST00000548823 CNNM1Q9NRU3 951 aa24.22■■□□□ 1.47
CTDSP2-204ENST00000548823 RPAP1Q9BWH6 1393 aaPredicted RBP24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 CDC45O75419 566 aa24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 SURF6O75683 361 aaKnown RBP24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 INHAP05111 366 aa24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 GSPT1P15170 499 aaKnown RBP24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 INPP5BP32019 993 aa24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 PDE1AP54750 535 aa24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 GRIK5Q16478 980 aa24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 NECAB2Q7Z6G3 386 aa24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 KAZALD1Q96I82 304 aa24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 SUCLG2Q96I99 432 aa24.21■■□□□ 1.47
CTDSP2-204ENST00000548823 FLT3LGP49771 235 aa24.2■■□□□ 1.46
CTDSP2-204ENST00000548823 CCDC57Q2TAC2 916 aa24.2■■□□□ 1.46
CTDSP2-204ENST00000548823 TAF7LQ5H9L4 462 aa24.2■■□□□ 1.46
CTDSP2-204ENST00000548823 MIGA2Q7L4E1 593 aa24.2■■□□□ 1.46
CTDSP2-204ENST00000548823 ZNF594Q96JF6 807 aaPredicted RBP24.2■■□□□ 1.46
CTDSP2-204ENST00000548823 ZDHHC15Q96MV8 337 aa24.2■■□□□ 1.46
CTDSP2-204ENST00000548823 MRIQ9BWK5 157 aa24.2■■□□□ 1.46
CTDSP2-204ENST00000548823 ELNP15502 786 aa24.19■■□□□ 1.46
CTDSP2-204ENST00000548823 BCAMP50895 628 aa24.19■■□□□ 1.46
CTDSP2-204ENST00000548823 IRF5Q13568 498 aa24.19■■□□□ 1.46
CTDSP2-204ENST00000548823 ERC1Q8IUD2 1116 aa24.19■■□□□ 1.46
CTDSP2-204ENST00000548823 TBC1D22AQ8WUA7 517 aa24.19■■□□□ 1.46
CTDSP2-204ENST00000548823 APBB1O00213 710 aa24.18■■□□□ 1.46
CTDSP2-204ENST00000548823 CYP2C8P10632 490 aa24.18■■□□□ 1.46
CTDSP2-204ENST00000548823 LMBR1LQ6UX01 489 aa24.18■■□□□ 1.46
CTDSP2-204ENST00000548823 RHPN1Q8TCX5 695 aa24.18■■□□□ 1.46
CTDSP2-204ENST00000548823 OTUD7AQ8TE49 926 aaPredicted RBP24.18■■□□□ 1.46
CTDSP2-204ENST00000548823 ZNF112Q9UJU3 913 aa24.18■■□□□ 1.46
CTDSP2-204ENST00000548823 GPAT2Q6NUI2 795 aa24.17■■□□□ 1.46
CTDSP2-204ENST00000548823 C7orf61Q8IZ16 206 aa24.17■■□□□ 1.46
CTDSP2-204ENST00000548823 ZMYND8Q9ULU4 1186 aaPredicted RBP24.17■■□□□ 1.46
CTDSP2-204ENST00000548823 MX1P20591 662 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms