RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 KCNB2Q92953 911 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 TEPSINQ96N21 525 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 BACH2Q9BYV9 841 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 DHX36Q9H2U1 1008 aaKnown RBP7.03□□□□□ -1.28
ABCF1-207ENST00000542772 NMRK2Q9NPI5 230 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 DDX4Q9NQI0 724 aaKnown RBP7.03□□□□□ -1.28
ABCF1-207ENST00000542772 ANAPC4Q9UJX5 808 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 SLC4A4Q9Y6R1 1079 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 CNTNAP1P78357 1384 aa7.03□□□□□ -1.28
ABCF1-207ENST00000542772 ASTN2O75129 1339 aaPredicted RBP7.02□□□□□ -1.28
ABCF1-207ENST00000542772 ITGBL1O95965 494 aaPredicted RBP7.02□□□□□ -1.29
ABCF1-207ENST00000542772 TNNI2P48788 182 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 TNFAIP1Q13829 316 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 RASA3Q14644 834 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 C12orf60Q5U649 245 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 ANGEL2Q5VTE6 544 aaKnown RBP7.02□□□□□ -1.29
ABCF1-207ENST00000542772 CTR9Q6PD62 1173 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 CDC37L1Q7L3B6 337 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 SH3BP5LQ7L8J4 393 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 TTC6Q86TZ1 520 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 LDHDQ86WU2 507 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 APOBEC3FQ8IUX4 373 aaKnown RBP7.02□□□□□ -1.29
ABCF1-207ENST00000542772 SDR42E1Q8WUS8 393 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 DCPSQ96C86 337 aaKnown RBP7.02□□□□□ -1.29
ABCF1-207ENST00000542772 IL17RAQ96F46 866 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 OSBPL5Q9H0X9 879 aaPredicted RBP7.02□□□□□ -1.29
ABCF1-207ENST00000542772 DEFB129Q9H1M3 183 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 EPB41L4AQ9HCS5 686 aaPredicted RBP7.02□□□□□ -1.29
ABCF1-207ENST00000542772 PPP2R3BQ9Y5P8 575 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 ATRNL1Q5VV63 1379 aa7.02□□□□□ -1.29
ABCF1-207ENST00000542772 COL2A1P02458 1487 aaPredicted RBP7.02□□□□□ -1.29
ABCF1-207ENST00000542772 FLT1P17948 1338 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 CLRN2A0PK11 232 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 DDTLA6NHG4 134 aaPredicted RBP7.01□□□□□ -1.29
ABCF1-207ENST00000542772 TCP10L2B9ZVM9 353 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 USP17L12C9JPN9 530 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 USP17L21D6R901 530 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 REC8O95072 547 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 POTEIP0CG38 1075 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 POTEJP0CG39 1038 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 YY1P25490 414 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 HSPA4P34932 840 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 USP5P45974 858 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 PLCD1P51178 756 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 CACNB3P54284 484 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 GABPAQ06546 454 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 KIAA1211Q6ZU35 1233 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 MAPKAPK5Q8IW41 473 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 NACAP1Q9BZK3 213 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 EHD4Q9H223 541 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 GPBP1L1Q9HC44 474 aaPredicted RBP7.01□□□□□ -1.29
ABCF1-207ENST00000542772 TMOD2Q9NZR1 351 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 PI4KBQ9UBF8 816 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 CTNNA3Q9UI47 895 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 PALD1Q9ULE6 856 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 U3KPZ7 1027 aaPredicted RBP7.01□□□□□ -1.29
ABCF1-207ENST00000542772 MYH1P12882 1939 aa7.01□□□□□ -1.29
ABCF1-207ENST00000542772 ZNF213O14771 459 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 TOMM70O94826 608 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 APPP05067 770 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 CYP21A2P08686 494 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 PCP11498 1178 aaKnown RBP7□□□□□ -1.29
ABCF1-207ENST00000542772 NT5C2P49902 561 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 TCP10Q12799 353 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 SUPT20HL1Q3ZLR7 823 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 NBPF12Q5TAG4 269 aaPredicted RBP7□□□□□ -1.29
ABCF1-207ENST00000542772 CHADLQ6NUI6 762 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 TATDN1Q6P1N9 297 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 ZNF784Q8NCA9 323 aaPredicted RBP7□□□□□ -1.29
ABCF1-207ENST00000542772 DDRGK1Q96HY6 314 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 TMEM39BQ9GZU3 492 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 NAPBQ9H115 298 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 VEZTQ9HBM0 779 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 MCM9Q9NXL9 1143 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 GGA3Q9NZ52 723 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 ARPP21Q9UBL0 812 aaPredicted RBP7□□□□□ -1.29
ABCF1-207ENST00000542772 HERC5Q9UII4 1024 aaKnown RBP7□□□□□ -1.29
ABCF1-207ENST00000542772 ZNF112Q9UJU3 913 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 TACC3Q9Y6A5 838 aa7□□□□□ -1.29
ABCF1-207ENST00000542772 BAZ2AQ9UIF9 1905 aaKnown RBP6.99□□□□□ -1.29
ABCF1-207ENST00000542772 UNCXA6NJT0 531 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 PHF20L1A8MW92 1017 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 SMIM22K7EJ46 135 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 SLC27A2O14975 620 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 USP2O75604 605 aaPredicted RBP6.99□□□□□ -1.29
ABCF1-207ENST00000542772 POLR3DP05423 398 aaPredicted RBP6.99□□□□□ -1.29
ABCF1-207ENST00000542772 PPARAQ07869 468 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 PICALMQ13492 652 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 MAP3K11Q16584 847 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 EAPPQ56P03 285 aaPredicted RBP6.99□□□□□ -1.29
ABCF1-207ENST00000542772 C16orf86Q6ZW13 317 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 KRT26Q7Z3Y9 468 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 USP48Q86UV5 1035 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 SULF1Q8IWU6 871 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 RBM46Q8TBY0 533 aaKnown RBP6.99□□□□□ -1.29
ABCF1-207ENST00000542772 ZNF526Q8TF50 670 aaPredicted RBP6.99□□□□□ -1.29
ABCF1-207ENST00000542772 HOOK2Q96ED9 719 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 NBPF3Q9H094 633 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 ANO2Q9NQ90 1003 aa6.99□□□□□ -1.29
ABCF1-207ENST00000542772 SERPINB13Q9UIV8 391 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms