RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 OTOFQ9HC10 1997 aa24.82■■□□□ 1.56
DDB1-220ENST00000542337 NSUN4Q96CB9 384 aaKnown RBP24.82■■□□□ 1.56
DDB1-220ENST00000542337 DBNDD2Q9BQY9 259 aa24.82■■□□□ 1.56
DDB1-220ENST00000542337 SOX10P56693 466 aa24.81■■□□□ 1.56
DDB1-220ENST00000542337 NOL9Q5SY16 702 aaKnown RBP24.81■■□□□ 1.56
DDB1-220ENST00000542337 ERC1Q8IUD2 1116 aa24.81■■□□□ 1.56
DDB1-220ENST00000542337 FAM43AQ8N2R8 423 aa24.81■■□□□ 1.56
DDB1-220ENST00000542337 EFCC1Q9HA90 598 aa24.81■■□□□ 1.56
DDB1-220ENST00000542337 PICK1Q9NRD5 415 aa24.81■■□□□ 1.56
DDB1-220ENST00000542337 NPM3O75607 178 aaKnown RBP24.8■■□□□ 1.56
DDB1-220ENST00000542337 CEP85Q6P2H3 762 aa24.8■■□□□ 1.56
DDB1-220ENST00000542337 OTOP1Q7RTM1 612 aa24.8■■□□□ 1.56
DDB1-220ENST00000542337 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.8■■□□□ 1.56
DDB1-220ENST00000542337 CD99L2Q8TCZ2 262 aa24.8■■□□□ 1.56
DDB1-220ENST00000542337 CHMP4BQ9H444 224 aaKnown RBP24.8■■□□□ 1.56
DDB1-220ENST00000542337 SNRKQ9NRH2 765 aa24.8■■□□□ 1.56
DDB1-220ENST00000542337 BTBD19C9JJ37 291 aa24.79■■□□□ 1.56
DDB1-220ENST00000542337 BAG3O95817 575 aa24.79■■□□□ 1.56
DDB1-220ENST00000542337 HSP90AB4PQ58FF6 505 aa24.79■■□□□ 1.56
DDB1-220ENST00000542337 ZNF512BQ96KM6 892 aaPredicted RBP24.79■■□□□ 1.56
DDB1-220ENST00000542337 IGSF3O75054 1194 aa24.78■■□□□ 1.56
DDB1-220ENST00000542337 RHBDL3P58872 404 aa24.78■■□□□ 1.56
DDB1-220ENST00000542337 NAA16Q6N069 864 aaPredicted RBP24.78■■□□□ 1.56
DDB1-220ENST00000542337 DDX4Q9NQI0 724 aaKnown RBP24.78■■□□□ 1.56
DDB1-220ENST00000542337 MYH2Q9UKX2 1941 aa24.78■■□□□ 1.56
DDB1-220ENST00000542337 AK9Q5TCS8 1911 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 DDTLA6NHG4 134 aaPredicted RBP24.77■■□□□ 1.56
DDB1-220ENST00000542337 PLCG2P16885 1265 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 KIF22Q14807 665 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 SH3BP5LQ7L8J4 393 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 SCYL3Q8IZE3 742 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 ZNF384Q8TF68 577 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 CCDC8Q9H0W5 538 aaPredicted RBP24.77■■□□□ 1.56
DDB1-220ENST00000542337 DDX19BQ9UMR2 479 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 KCNH4Q9UQ05 1017 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 LAMB1P07942 1786 aa24.77■■□□□ 1.56
DDB1-220ENST00000542337 PHF20L1A8MW92 1017 aa24.76■■□□□ 1.55
DDB1-220ENST00000542337 CXCL11O14625 94 aa24.76■■□□□ 1.55
DDB1-220ENST00000542337 TLR2O60603 784 aa24.76■■□□□ 1.55
DDB1-220ENST00000542337 MAP3K10Q02779 954 aa24.76■■□□□ 1.55
DDB1-220ENST00000542337 ANKRD23Q86SG2 305 aa24.76■■□□□ 1.55
DDB1-220ENST00000542337 TEX11Q8IYF3 940 aa24.76■■□□□ 1.55
DDB1-220ENST00000542337 RCAN3Q9UKA8 241 aa24.76■■□□□ 1.55
DDB1-220ENST00000542337 RFX7Q2KHR2 1363 aa24.76■■□□□ 1.55
DDB1-220ENST00000542337 CTNND1O60716 968 aaKnown RBP24.75■■□□□ 1.55
DDB1-220ENST00000542337 HMMRO75330 724 aa24.75■■□□□ 1.55
DDB1-220ENST00000542337 DBNLQ9UJU6 430 aaKnown RBP24.75■■□□□ 1.55
DDB1-220ENST00000542337 PTPN22Q9Y2R2 807 aa24.75■■□□□ 1.55
DDB1-220ENST00000542337 ZHX2Q9Y6X8 837 aa24.75■■□□□ 1.55
DDB1-220ENST00000542337 TBC1D12O60347 775 aa24.74■■□□□ 1.55
DDB1-220ENST00000542337 RPAP2Q8IXW5 612 aaPredicted RBP24.74■■□□□ 1.55
DDB1-220ENST00000542337 EAF2Q96CJ1 260 aaPredicted RBP24.74■■□□□ 1.55
DDB1-220ENST00000542337 EXOC6BQ9Y2D4 811 aa24.74■■□□□ 1.55
DDB1-220ENST00000542337 ATRNL1Q5VV63 1379 aa24.74■■□□□ 1.55
DDB1-220ENST00000542337 PDHXO00330 501 aa24.73■■□□□ 1.55
DDB1-220ENST00000542337 CYP2E1P05181 493 aaPredicted RBP24.73■■□□□ 1.55
DDB1-220ENST00000542337 ZAP70P43403 619 aa24.73■■□□□ 1.55
DDB1-220ENST00000542337 FASTKD5Q7L8L6 764 aaKnown RBP24.73■■□□□ 1.55
DDB1-220ENST00000542337 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.73■■□□□ 1.55
DDB1-220ENST00000542337 PTPRAP18433 802 aa24.72■■□□□ 1.55
DDB1-220ENST00000542337 AACSQ86V21 672 aa24.72■■□□□ 1.55
DDB1-220ENST00000542337 OSBPL5Q9H0X9 879 aaPredicted RBP24.72■■□□□ 1.55
DDB1-220ENST00000542337 AATFQ9NY61 560 aaKnown RBP eCLIP24.72■■□□□ 1.55
DDB1-220ENST00000542337 COG6Q9Y2V7 657 aa24.72■■□□□ 1.55
DDB1-220ENST00000542337 PPP4CP60510 307 aa24.71■■□□□ 1.55
DDB1-220ENST00000542337 SH3RF3Q8TEJ3 882 aaPredicted RBP24.71■■□□□ 1.55
DDB1-220ENST00000542337 TLR7Q9NYK1 1049 aaKnown RBP24.71■■□□□ 1.55
DDB1-220ENST00000542337 PARK7Q99497 189 aaKnown RBP24.7■■□□□ 1.54
DDB1-220ENST00000542337 DHX36Q9H2U1 1008 aaKnown RBP24.7■■□□□ 1.54
DDB1-220ENST00000542337 IDH1O75874 414 aaKnown RBP24.69■■□□□ 1.54
DDB1-220ENST00000542337 PIH1D3Q9NQM4 214 aaKnown RBP24.69■■□□□ 1.54
DDB1-220ENST00000542337 ZBTB40Q9NUA8 1239 aa24.69■■□□□ 1.54
DDB1-220ENST00000542337 PI4KBQ9UBF8 816 aa24.69■■□□□ 1.54
DDB1-220ENST00000542337 HERC5Q9UII4 1024 aaKnown RBP24.69■■□□□ 1.54
DDB1-220ENST00000542337 AFG3L2Q9Y4W6 797 aa24.69■■□□□ 1.54
DDB1-220ENST00000542337 GNRH1P01148 92 aa24.68■■□□□ 1.54
DDB1-220ENST00000542337 LACTBP83111 547 aaPredicted RBP24.68■■□□□ 1.54
DDB1-220ENST00000542337 NBPF11Q86T75 865 aa24.68■■□□□ 1.54
DDB1-220ENST00000542337 CERS3Q8IU89 383 aa24.68■■□□□ 1.54
DDB1-220ENST00000542337 CLASRPQ8N2M8 674 aaKnown RBP24.68■■□□□ 1.54
DDB1-220ENST00000542337 RHPN1Q8TCX5 695 aa24.68■■□□□ 1.54
DDB1-220ENST00000542337 KIF1BPQ96EK5 621 aa24.68■■□□□ 1.54
DDB1-220ENST00000542337 COL2A1P02458 1487 aaPredicted RBP24.67■■□□□ 1.54
DDB1-220ENST00000542337 A0A0G2JLL6 359 aaPredicted RBP24.67■■□□□ 1.54
DDB1-220ENST00000542337 CYP7A1P22680 504 aa24.67■■□□□ 1.54
DDB1-220ENST00000542337 MAP3K12Q12852 859 aa24.67■■□□□ 1.54
DDB1-220ENST00000542337 TMED8Q6PL24 325 aaPredicted RBP24.67■■□□□ 1.54
DDB1-220ENST00000542337 C17orf99Q6UX52 265 aa24.67■■□□□ 1.54
DDB1-220ENST00000542337 GADL1Q6ZQY3 521 aa24.67■■□□□ 1.54
DDB1-220ENST00000542337 PRRT2Q7Z6L0 340 aaPredicted RBP24.67■■□□□ 1.54
DDB1-220ENST00000542337 TGFBRAP1Q8WUH2 860 aa24.67■■□□□ 1.54
DDB1-220ENST00000542337 TRIM34Q9BYJ4 488 aa24.67■■□□□ 1.54
DDB1-220ENST00000542337 IL1RAPL2Q9NP60 686 aa24.67■■□□□ 1.54
DDB1-220ENST00000542337 CPA4Q9UI42 421 aa24.67■■□□□ 1.54
DDB1-220ENST00000542337 APBB1O00213 710 aa24.66■■□□□ 1.54
DDB1-220ENST00000542337 SLURP2P0DP57 97 aa24.66■■□□□ 1.54
DDB1-220ENST00000542337 MOGSQ13724 837 aa24.66■■□□□ 1.54
DDB1-220ENST00000542337 TBC1D2Q9BYX2 928 aa24.66■■□□□ 1.54
DDB1-220ENST00000542337 TRIM75PA6NK02 468 aa24.65■■□□□ 1.54
DDB1-220ENST00000542337 FAM196BA6NMK8 535 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms