RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 GALNT6Q8NCL4 622 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 LTV1Q96GA3 475 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-208ENST00000538266 PRKRIP1Q9H875 184 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-208ENST00000538266 AVENQ9NQS1 362 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-208ENST00000538266 NLRP2Q9NX02 1062 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 GDF2Q9UK05 429 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-208ENST00000538266 TRPC5Q9UL62 973 aaPredicted RBP5.73□□□□□ -1.49
SNHG1-208ENST00000538266 NRAPQ86VF7 1730 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 PEAK1Q9H792 1746 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 CRB1P82279 1406 aa5.73□□□□□ -1.49
SNHG1-208ENST00000538266 COL18A1P39060 1754 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 RGPD5Q99666 1765 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 BCL9LQ86UU0 1499 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 SIN3BO75182 1162 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 CELA2BP08218 269 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-208ENST00000538266 RARAP10276 462 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 NFKB1P19838 968 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 USP5P45974 858 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 INSM1Q01101 510 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-208ENST00000538266 HSP90AB2PQ58FF8 381 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 GOLGA6L1Q8N7Z2 621 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 ANKRD24Q8TF21 1146 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 WHAMMQ8TF30 809 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 GZF1Q9H116 711 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-208ENST00000538266 USP35Q9P2H5 1018 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 WDR17Q8IZU2 1322 aa5.72□□□□□ -1.49
SNHG1-208ENST00000538266 NDUFB5O43674 189 aa5.71□□□□□ -1.5
SNHG1-208ENST00000538266 BCRP11274 1271 aa5.71□□□□□ -1.5
SNHG1-208ENST00000538266 TRIP4Q15650 581 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-208ENST00000538266 VPS72Q15906 364 aa5.71□□□□□ -1.5
SNHG1-208ENST00000538266 TTC39BQ5VTQ0 682 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-208ENST00000538266 ZSCAN1Q8NBB4 408 aa5.71□□□□□ -1.5
SNHG1-208ENST00000538266 EDARADDQ8WWZ3 215 aa5.71□□□□□ -1.5
SNHG1-208ENST00000538266 ZFATQ9P243 1243 aa5.71□□□□□ -1.5
SNHG1-208ENST00000538266 NUDCQ9Y266 331 aa5.71□□□□□ -1.5
SNHG1-208ENST00000538266 ATRNO75882 1429 aa5.71□□□□□ -1.5
SNHG1-208ENST00000538266 A6NHS1 94 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 U2SURPO15042 1029 aaKnown RBP5.7□□□□□ -1.5
SNHG1-208ENST00000538266 OIP5O43482 229 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 DIAPH1O60610 1272 aaKnown RBP5.7□□□□□ -1.5
SNHG1-208ENST00000538266 ALAS2P22557 587 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 RXRBP28702 533 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 MAP3K10Q02779 954 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 TBC1D8BQ0IIM8 1120 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 EIF4A2Q14240 407 aaKnown RBP5.7□□□□□ -1.5
SNHG1-208ENST00000538266 ZNF385CQ66K41 422 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-208ENST00000538266 PDE12Q6L8Q7 609 aaKnown RBP5.7□□□□□ -1.5
SNHG1-208ENST00000538266 XKR5Q6UX68 686 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 C1orf229Q6ZS94 237 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-208ENST00000538266 ZNF438Q7Z4V0 828 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 FCHSD1Q86WN1 690 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 TCP11L2Q8N4U5 519 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 SVOPQ8N4V2 548 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 CARD10Q9BWT7 1032 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 ELP3Q9H9T3 547 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 ENAMQ9NRM1 1142 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 SPATA31A1Q5TZJ5 1347 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 SPATA31A5Q5VU36 1347 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 SPATA31A7Q8IWB4 1347 aa5.7□□□□□ -1.5
SNHG1-208ENST00000538266 MMP20O60882 483 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 MAP3K6O95382 1288 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 NEFMP07197 916 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 RBM6P78332 1123 aaKnown RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 EHHADHQ08426 723 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 WDR43Q15061 677 aaKnown RBP eCLIP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 DHX32Q7L7V1 743 aaKnown RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 NEDD1Q8NHV4 660 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 RAPGEF4Q8WZA2 1011 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 BTBD6Q96KE9 485 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 YTHDC1Q96MU7 727 aaKnown RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 CITED4Q96RK1 184 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 UBE2OQ9C0C9 1292 aaKnown RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 MRS2Q9HD23 443 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 LRRC4BQ9NT99 713 aa5.69□□□□□ -1.5
SNHG1-208ENST00000538266 ABI2Q9NYB9 513 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 TLR7Q9NYK1 1049 aaKnown RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 THRAP3Q9Y2W1 955 aaKnown RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 COL3A1P02461 1466 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-208ENST00000538266 PARP4Q9UKK3 1724 aaKnown RBP5.68□□□□□ -1.5
SNHG1-208ENST00000538266 GLI3P10071 1580 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 RGPD2P0DJD1 1756 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 ELOA3CA0A087WX78 387 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-208ENST00000538266 ELOA3DA6NLF2 546 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-208ENST00000538266 ADARB2-AS1A8MUL3 147 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 ZBTB42B2RXF5 422 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 PSAPP07602 524 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 U2AF1L5P0DN76 240 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-208ENST00000538266 EPXP11678 715 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 IL2RBP14784 551 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 U2AF1Q01081 240 aaKnown RBP eCLIP5.68□□□□□ -1.56e-8■■■□□ 17.5
SNHG1-208ENST00000538266 PDE3BQ13370 1112 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 PCSK7Q16549 785 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 ELOA3BQ3SY89 546 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 NBPF6Q5VWK0 638 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 SLCO4C1Q6ZQN7 724 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 SND1Q7KZF4 910 aaKnown RBP eCLIP5.68□□□□□ -1.5
SNHG1-208ENST00000538266 USHBP1Q8N6Y0 703 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 ELOA3Q8NG57 546 aa5.68□□□□□ -1.5
SNHG1-208ENST00000538266 TNFRSF25Q93038 417 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms