RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 HS1BP3Q53T59 392 aa18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 CREBRFQ8IUR6 639 aa18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 IGDCC4Q8TDY8 1250 aa18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 SLC3A2P08195 630 aaKnown RBP18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 STX1AQ16623 288 aa18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 DZIP1Q86YF9 867 aaKnown RBP18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 C16orf45Q96MC5 204 aaPredicted RBP18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 KRT23Q9C075 422 aa18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 VPS54Q9P1Q0 977 aa18.44■□□□□ 0.54
ATP2C1-224ENST00000533801 CEP57L1Q8IYX8 460 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 TNKSO95271 1327 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 SALL1Q9NSC2 1324 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 ZNF202O95125 648 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 DIS3L2Q8IYB7 885 aaKnown RBP18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 FAM84BQ96KN1 310 aaPredicted RBP18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 AK7Q96M32 723 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 THRAP3Q9Y2W1 955 aaKnown RBP18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 MYO5AQ9Y4I1 1855 aaKnown RBP18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 PFKFB1P16118 471 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 DPCR1Q3MIW9 517 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 TPTE2Q6XPS3 522 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 TMEM87BQ96K49 555 aa18.43■□□□□ 0.54
ATP2C1-224ENST00000533801 SHANK3Q9BYB0 1731 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 ABCC12Q96J65 1359 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 UBR2Q8IWV8 1755 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 WDHD1O75717 1129 aaPredicted RBP18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 LMOD1P29536 600 aaPredicted RBP18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 SYKP43405 635 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 SNW1Q13573 536 aaKnown RBP18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 FAM196AQ6ZSG2 479 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 KCNG4Q8TDN1 519 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 HIBADHP31937 336 aaKnown RBP18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 IFIT1BQ5T764 474 aaKnown RBP18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 ZNF654Q8IZM8 581 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 CABP5Q9NP86 173 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 TRMT1Q9NXH9 659 aaKnown RBP18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 MCM9Q9NXL9 1143 aa18.42■□□□□ 0.54
ATP2C1-224ENST00000533801 PLEKHG2Q9H7P9 1386 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 DIXDC1Q155Q3 683 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 ANO10Q9NW15 660 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 SAP30BPQ9UHR5 308 aaKnown RBP18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 V9GY48 417 aaPredicted RBP18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 PNOCQ13519 176 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 OXER1Q8TDS5 423 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 ESR2Q92731 530 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 KCNF1Q9H3M0 494 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 CNNM2Q9H8M5 875 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 RTEL1Q9NZ71 1219 aa18.41■□□□□ 0.54
ATP2C1-224ENST00000533801 FAM205CA6NFA0 338 aa18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 ZNF500O60304 480 aaPredicted RBP18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 ZNF75DP51815 510 aa18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 HSP90AA2PQ14568 343 aaPredicted RBP18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 ADALQ6DHV7 355 aa18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 F8W031 263 aaPredicted RBP18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 USP5P45974 858 aa18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 TAF1P21675 1872 aa18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 NUP98P52948 1817 aa18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 ABCA3Q99758 1704 aa18.4■□□□□ 0.54
ATP2C1-224ENST00000533801 TSPY2A6NKD2 308 aa18.39■□□□□ 0.54
ATP2C1-224ENST00000533801 MECOMQ03112 1051 aa18.39■□□□□ 0.54
ATP2C1-224ENST00000533801 BRAPQ7Z569 592 aa18.39■□□□□ 0.54
ATP2C1-224ENST00000533801 GRAMD1CQ8IYS0 662 aa18.39■□□□□ 0.53
ATP2C1-224ENST00000533801 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.53
ATP2C1-224ENST00000533801 MROH7-TTC4A0A0A0MT08 1334 aa18.39■□□□□ 0.53
ATP2C1-224ENST00000533801 ZNF827Q17R98 1081 aa18.39■□□□□ 0.53
ATP2C1-224ENST00000533801 BCL2L12Q9HB09 334 aa18.39■□□□□ 0.53
ATP2C1-224ENST00000533801 SLIT2O94813 1529 aa18.39■□□□□ 0.53
ATP2C1-224ENST00000533801 PLEKHA8P1O95397 391 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 GRIN1Q05586 938 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 IQCA1Q86XH1 822 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 CNNM3Q8NE01 707 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 BSDC1Q9NW68 430 aaPredicted RBP18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 RAD21O60216 631 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 NFIXQ14938 502 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 FANCBQ8NB91 859 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 FAM217BQ9NTX9 383 aaPredicted RBP18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 FOXN1O15353 648 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 GNAT2P19087 354 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 CCDC144BQ3MJ40 725 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 FMR1NBQ8N0W7 255 aaPredicted RBP18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 STAMQ92783 540 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 DOT1LQ8TEK3 1739 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 LAMA4Q16363 1823 aa18.38■□□□□ 0.53
ATP2C1-224ENST00000533801 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 USP17L8P0C7I0 530 aa18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 DYNLL2Q96FJ2 89 aa18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 ZNF512BQ96KM6 892 aaPredicted RBP18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 CATIPQ7Z7H3 387 aa18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 CTAGE5O15320 804 aa18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 TPD52L1Q16890 204 aaPredicted RBP18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 NAT10Q9H0A0 1025 aaKnown RBP18.37■□□□□ 0.53
ATP2C1-224ENST00000533801 LRP6O75581 1613 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 UBE4AQ14139 1066 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 STX8Q9UNK0 236 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 RIMBP2O15034 1052 aa18.36■□□□□ 0.53
ATP2C1-224ENST00000533801 KLHL10Q6JEL2 608 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms