RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 RGS12O14924 1447 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 NPHP4O75161 1426 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-218ENST00000528232 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 BRD1O95696 1058 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 ASIC1P78348 528 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 CERS3Q8IU89 383 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 B4E1Z4 1266 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 HSF2BPO75031 334 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 ANO1Q5XXA6 986 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 OSBPL3Q9H4L5 887 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 PICALMQ13492 652 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 PPP2R5BQ15173 497 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 TCERG1LQ5VWI1 586 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 KRBA2Q6ZNG9 492 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 DRC1Q96MC2 740 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 ARMT1Q9H993 441 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.13□□□□□ -1.119e-8■□□□□ 10.6
CTNND1-218ENST00000528232 LMTK3Q96Q04 1460 aa8.13□□□□□ -1.11
CTNND1-218ENST00000528232 STMN4Q9H169 189 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-218ENST00000528232 TTC12Q9H892 705 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-218ENST00000528232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNND1-218ENST00000528232 UBAP1LF5GYI3 381 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 RXRAP19793 462 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 PTGS1P23219 599 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 TCIRG1Q13488 830 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 IQUBQ8NA54 791 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 FBF1Q8TES7 1133 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 MED14O60244 1454 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 KCNQ3O43525 872 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 LMOD1P29536 600 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-218ENST00000528232 DBN1Q16643 649 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 SYCP3Q8IZU3 236 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 EYA3Q99504 573 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 CUTAO60888 179 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 MCM7P33993 719 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 MYL5Q02045 173 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 CEP57Q86XR8 500 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 SPATA5Q8NB90 893 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.12□□□□□ -1.116e-14■□□□□ 9.9
CTNND1-218ENST00000528232 LEO1Q8WVC0 666 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-218ENST00000528232 IFNKQ9P0W0 207 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 FEZ2Q9UHY8 353 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-218ENST00000528232 LUC7L3O95232 432 aaKnown RBP8.12□□□□□ -1.11
CTNND1-218ENST00000528232 PARP1P09874 1014 aaKnown RBP8.12□□□□□ -1.11
CTNND1-218ENST00000528232 HIBADHP31937 336 aaKnown RBP8.12□□□□□ -1.11
CTNND1-218ENST00000528232 PPP1R2P41236 205 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 KRT79Q5XKE5 535 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 A0A1B0GVL5 298 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 TRAPPC3LQ5T215 181 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 GOLGA1Q92805 767 aa8.12□□□□□ -1.11
CTNND1-218ENST00000528232 E7EWF7 191 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 GNPATO15228 680 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 SLC8A1P32418 973 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 KRT83P78385 493 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 LACTBP83111 547 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-218ENST00000528232 CCDC6Q16204 474 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 WHAMMP3Q1A5X7 153 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 PPFIBP2Q8ND30 876 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 GTF3C6Q969F1 213 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 IFT74Q96LB3 600 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 TTC14Q96N46 770 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 JADE2Q9NQC1 790 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 DNAI1Q9UI46 699 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 DCAF8L1A6NGE4 600 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 VGLL3A8MV65 326 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 F8W031 263 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-218ENST00000528232 AKR1B10O60218 316 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 TACC1O75410 805 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 ZKSCAN8Q15776 578 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-218ENST00000528232 CDC37L1Q7L3B6 337 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 HDXQ7Z353 690 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 DNAJC10Q8IXB1 793 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 SMARCC2Q8TAQ2 1214 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 CCDC114Q96M63 670 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 HAUS7Q99871 368 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 ZKSCAN3Q9BRR0 538 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 PRR36Q9H6K5 1346 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 CTAGE15A4D2H0 777 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 CTAGE8P0CG41 777 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 ZAP70P43403 619 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 CTSWP56202 376 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 TTC6Q86TZ1 520 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 CTAGE6Q86UF2 777 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 CTAGE4Q8IX94 777 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 TBC1D5Q92609 795 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 ZMAT2Q96NC0 199 aaKnown RBP8.11□□□□□ -1.11
CTNND1-218ENST00000528232 ZSWIM6Q9HCJ5 1215 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 INPP5BP32019 993 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 RPUSD2Q8IZ73 545 aaKnown RBP8.11□□□□□ -1.11
CTNND1-218ENST00000528232 ZC3H12CQ9C0D7 883 aaKnown RBP8.11□□□□□ -1.11
CTNND1-218ENST00000528232 TAOK3Q9H2K8 898 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 NCOA5Q9HCD5 579 aaKnown RBP8.11□□□□□ -1.11
CTNND1-218ENST00000528232 PARP3Q9Y6F1 533 aa8.11□□□□□ -1.11
CTNND1-218ENST00000528232 PLCD1P51178 756 aa8.1□□□□□ -1.11
CTNND1-218ENST00000528232 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
CTNND1-218ENST00000528232 ZNF274Q96GC6 653 aaPredicted RBP8.1□□□□□ -1.11
CTNND1-218ENST00000528232 ZNF532Q9HCE3 1301 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms