RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, human

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSSCA1-205	ENST00000527920	DDX4	Q9NQI0	724 aa	Known RBP	40.41	■■■■■ 4.06
SSSCA1-205	ENST00000527920	CNKSR2	Q8WXI2	1034 aa		40.4	■■■■■ 4.06
SSSCA1-205	ENST00000527920	ZKSCAN4	Q969J2	545 aa	Predicted RBP	40.4	■■■■■ 4.06
SSSCA1-205	ENST00000527920	IL1RAPL2	Q9NP60	686 aa		40.4	■■■■■ 4.06
SSSCA1-205	ENST00000527920	MAST2	Q6P0Q8	1798 aa		40.4	■■■■■ 4.06
SSSCA1-205	ENST00000527920	GTF2A2	P52657	109 aa		40.39	■■■■■ 4.06
SSSCA1-205	ENST00000527920	NAA16	Q6N069	864 aa	Predicted RBP	40.39	■■■■■ 4.06
SSSCA1-205	ENST00000527920	OTUD5	Q96G74	571 aa		40.39	■■■■■ 4.06
SSSCA1-205	ENST00000527920	MAP3K10	Q02779	954 aa		40.38	■■■■■ 4.05
SSSCA1-205	ENST00000527920	SH3BP5L	Q7L8J4	393 aa		40.38	■■■■■ 4.05
SSSCA1-205	ENST00000527920	MCOLN1	Q9GZU1	580 aa		40.38	■■■■■ 4.05
SSSCA1-205	ENST00000527920	GPR25	O00155	361 aa		40.37	■■■■■ 4.05
SSSCA1-205	ENST00000527920	NOL9	Q5SY16	702 aa	Known RBP	40.37	■■■■■ 4.05
SSSCA1-205	ENST00000527920	COL2A1	P02458	1487 aa	Predicted RBP	40.37	■■■■■ 4.05
SSSCA1-205	ENST00000527920	CAPN15	O75808	1086 aa		40.36	■■■■■ 4.05
SSSCA1-205	ENST00000527920	INPP5B	P32019	993 aa		40.36	■■■■■ 4.05
SSSCA1-205	ENST00000527920	DGKZ	Q13574	1117 aa		40.36	■■■■■ 4.05
SSSCA1-205	ENST00000527920	TMED8	Q6PL24	325 aa	Predicted RBP	40.36	■■■■■ 4.05
SSSCA1-205	ENST00000527920	ZNF296	Q8WUU4	475 aa	Predicted RBP	40.36	■■■■■ 4.05
SSSCA1-205	ENST00000527920	NOL10	Q9BSC4	688 aa	Known RBP	40.36	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PIH1D3	Q9NQM4	214 aa	Known RBP	40.36	■■■■■ 4.05
SSSCA1-205	ENST00000527920	BAG3	O95817	575 aa		40.35	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PLCG2	P16885	1265 aa		40.35	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PPIL2	Q13356	520 aa		40.35	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PICALM	Q13492	652 aa		40.35	■■■■■ 4.05
SSSCA1-205	ENST00000527920	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	40.35	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PTPN18	Q99952	460 aa		40.35	■■■■■ 4.05
SSSCA1-205	ENST00000527920	DDTL	A6NHG4	134 aa	Predicted RBP	40.34	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PPP4C	P60510	307 aa		40.34	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PPAT	Q06203	517 aa		40.34	■■■■■ 4.05
SSSCA1-205	ENST00000527920	DOCK2	Q92608	1830 aa		40.33	■■■■■ 4.05
SSSCA1-205	ENST00000527920	CTU1	Q7Z7A3	348 aa	Known RBP	40.33	■■■■■ 4.05
SSSCA1-205	ENST00000527920	BRI3BP	Q8WY22	251 aa		40.33	■■■■■ 4.05
SSSCA1-205	ENST00000527920	AK9	Q5TCS8	1911 aa		40.32	■■■■■ 4.05
SSSCA1-205	ENST00000527920	CCL15-CCL14	A0A0B4J2E2	113 aa		40.32	■■■■■ 4.05
SSSCA1-205	ENST00000527920	CCL15	Q16663	113 aa		40.32	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	40.32	■■■■■ 4.05
SSSCA1-205	ENST00000527920	R3HDML	Q9H3Y0	253 aa		40.32	■■■■■ 4.05
SSSCA1-205	ENST00000527920	PHF20L1	A8MW92	1017 aa		40.31	■■■■■ 4.04
SSSCA1-205	ENST00000527920	TEX11	Q8IYF3	940 aa		40.31	■■■■■ 4.04
SSSCA1-205	ENST00000527920	APBB1	O00213	710 aa		40.3	■■■■■ 4.04
SSSCA1-205	ENST00000527920	IRF6	O14896	467 aa		40.3	■■■■■ 4.04
SSSCA1-205	ENST00000527920	IFIT2	P09913	472 aa	Known RBP	40.3	■■■■■ 4.04
SSSCA1-205	ENST00000527920	CETP	P11597	493 aa		40.3	■■■■■ 4.04
SSSCA1-205	ENST00000527920	SNAPC2	Q13487	334 aa		40.3	■■■■■ 4.04
SSSCA1-205	ENST00000527920	TBC1D12	O60347	775 aa		40.29	■■■■■ 4.04
SSSCA1-205	ENST00000527920	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	40.29	■■■■■ 4.04
SSSCA1-205	ENST00000527920	OSBPL5	Q9H0X9	879 aa	Predicted RBP	40.29	■■■■■ 4.04
SSSCA1-205	ENST00000527920	AATF	Q9NY61	560 aa	Known RBP eCLIP	40.29	■■■■■ 4.04
SSSCA1-205	ENST00000527920	FKTN	O75072	461 aa		40.28	■■■■■ 4.04
SSSCA1-205	ENST00000527920	ADGRA1	Q86SQ6	560 aa		40.28	■■■■■ 4.04
SSSCA1-205	ENST00000527920	CERS3	Q8IU89	383 aa		40.28	■■■■■ 4.04
SSSCA1-205	ENST00000527920	ZCCHC17	Q9NP64	241 aa	Known RBP	40.28	■■■■■ 4.04
SSSCA1-205	ENST00000527920	IDH1	O75874	414 aa	Known RBP	40.27	■■■■■ 4.04
SSSCA1-205	ENST00000527920	KCNH4	Q9UQ05	1017 aa		40.27	■■■■■ 4.04
SSSCA1-205	ENST00000527920	MAP3K12	Q12852	859 aa		40.26	■■■■■ 4.04
SSSCA1-205	ENST00000527920	CRHR2	Q13324	411 aa		40.26	■■■■■ 4.04
SSSCA1-205	ENST00000527920	RRP1	P56182	461 aa	Known RBP	40.25	■■■■■ 4.03
SSSCA1-205	ENST00000527920	TTF1	Q15361	905 aa	Predicted RBP	40.25	■■■■■ 4.03
SSSCA1-205	ENST00000527920	SCYL3	Q8IZE3	742 aa		40.25	■■■■■ 4.03
SSSCA1-205	ENST00000527920	CYP7A1	P22680	504 aa		40.24	■■■■■ 4.03
SSSCA1-205	ENST00000527920	PKN2	Q16513	984 aa	Known RBP	40.24	■■■■■ 4.03
SSSCA1-205	ENST00000527920	ANTXR1	Q9H6X2	564 aa		40.24	■■■■■ 4.03
SSSCA1-205	ENST00000527920	NDUFB9	Q9Y6M9	179 aa		40.24	■■■■■ 4.03
SSSCA1-205	ENST00000527920	CTNND1	O60716	968 aa	Known RBP	40.23	■■■■■ 4.03
SSSCA1-205	ENST00000527920	LRRCC1	Q9C099	1032 aa		40.23	■■■■■ 4.03
SSSCA1-205	ENST00000527920	DHX36	Q9H2U1	1008 aa	Known RBP	40.23	■■■■■ 4.03
SSSCA1-205	ENST00000527920	FAM43A	Q8N2R8	423 aa		40.22	■■■■■ 4.03
SSSCA1-205	ENST00000527920	PICK1	Q9NRD5	415 aa		40.22	■■■■■ 4.03
SSSCA1-205	ENST00000527920	MYO5A	Q9Y4I1	1855 aa	Known RBP	40.22	■■■■■ 4.03
SSSCA1-205	ENST00000527920	YTHDC1	Q96MU7	727 aa	Known RBP	40.21	■■■■■ 4.03
SSSCA1-205	ENST00000527920	MAGEB6	Q8N7X4	407 aa		40.2	■■■■■ 4.03
SSSCA1-205	ENST00000527920	TAF1C	Q15572	869 aa	Predicted RBP	40.19	■■■■■ 4.02
SSSCA1-205	ENST00000527920	TGFBRAP1	Q8WUH2	860 aa		40.19	■■■■■ 4.02
SSSCA1-205	ENST00000527920	ZFYVE28	Q9HCC9	887 aa		40.19	■■■■■ 4.02
SSSCA1-205	ENST00000527920	HERC5	Q9UII4	1024 aa	Known RBP	40.19	■■■■■ 4.02
SSSCA1-205	ENST00000527920	FLT1	P17948	1338 aa		40.18	■■■■■ 4.02
SSSCA1-205	ENST00000527920	BTBD19	C9JJ37	291 aa		40.18	■■■■■ 4.02
SSSCA1-205	ENST00000527920	CXCL11	O14625	94 aa		40.18	■■■■■ 4.02
SSSCA1-205	ENST00000527920	PTPRA	P18433	802 aa		40.18	■■■■■ 4.02
SSSCA1-205	ENST00000527920	DCTPP1	Q9H773	170 aa		40.18	■■■■■ 4.02
SSSCA1-205	ENST00000527920	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	40.18	■■■■■ 4.02
SSSCA1-205	ENST00000527920	PI4KB	Q9UBF8	816 aa		40.18	■■■■■ 4.02
SSSCA1-205	ENST00000527920	ATP5J	P18859	108 aa		40.17	■■■■■ 4.02
SSSCA1-205	ENST00000527920	SLURP2	P0DP57	97 aa		40.15	■■■■■ 4.02
SSSCA1-205	ENST00000527920	DYNLL1	P63167	89 aa	Known RBP	40.14	■■■■■ 4.02
SSSCA1-205	ENST00000527920	ANKRD23	Q86SG2	305 aa		40.14	■■■■■ 4.02
SSSCA1-205	ENST00000527920	METTL16	Q86W50	562 aa	Known RBP	40.14	■■■■■ 4.02
SSSCA1-205	ENST00000527920	MAPKAPK5	Q8IW41	473 aa		40.14	■■■■■ 4.02
SSSCA1-205	ENST00000527920	ERO1A	Q96HE7	468 aa		40.14	■■■■■ 4.02
SSSCA1-205	ENST00000527920	CCDC85C	A6NKD9	419 aa		40.13	■■■■■ 4.01
SSSCA1-205	ENST00000527920	MIGA1	Q8NAN2	632 aa		40.13	■■■■■ 4.01
SSSCA1-205	ENST00000527920	DNAJC2	Q99543	621 aa	Known RBP	40.13	■■■■■ 4.01
SSSCA1-205	ENST00000527920	ZHX2	Q9Y6X8	837 aa		40.13	■■■■■ 4.01
SSSCA1-205	ENST00000527920	FOCAD	Q5VW36	1801 aa		40.13	■■■■■ 4.01
SSSCA1-205	ENST00000527920	GOLIM4	O00461	696 aa		40.12	■■■■■ 4.01
SSSCA1-205	ENST00000527920	SP3	Q02447	781 aa		40.12	■■■■■ 4.01
SSSCA1-205	ENST00000527920	MOGS	Q13724	837 aa		40.12	■■■■■ 4.01
SSSCA1-205	ENST00000527920	DOCK1	Q14185	1865 aa		40.12	■■■■■ 4.01
SSSCA1-205	ENST00000527920	AFG3L2	Q9Y4W6	797 aa		40.12	■■■■■ 4.01

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms