RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 PHACTR2O75167 634 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 METAP2P50579 478 aaKnown RBP eCLIP15.12■□□□□ 0.013e-8■■■■□ 23.9
CAPN1-202ENST00000524773 PTPAQ15257 358 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 SMYD4Q8IYR2 804 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-202ENST00000524773 TC2NQ8N9U0 490 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 MED15Q96RN5 788 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 RNF216Q9NWF9 866 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-202ENST00000524773 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
CAPN1-202ENST00000524773 C5P01031 1676 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 IKBKBO14920 756 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 NFXL1Q6ZNB6 911 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 NCOA7Q8NI08 942 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 TUBE1Q9UJT0 475 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 POLR2DO15514 142 aaKnown RBP15.12■□□□□ 0.01
CAPN1-202ENST00000524773 RANBP6O60518 1105 aaKnown RBP15.12■□□□□ 0.01
CAPN1-202ENST00000524773 BRAPQ7Z569 592 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 C10orf67Q8IYJ2 551 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 SLC26A6Q9BXS9 759 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 PLEKHA4Q9H4M7 779 aa15.12■□□□□ 0.01
CAPN1-202ENST00000524773 BTBD18B2RXH4 712 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 STAMQ92783 540 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 TEX13AQ9BXU3 409 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-202ENST00000524773 SERTAD1Q9UHV2 236 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 SLIT3O75094 1523 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 RHOXF2BP0C7M4 288 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 IL15P40933 162 aaPredicted RBP15.11■□□□□ 0.01
CAPN1-202ENST00000524773 MAP3K9P80192 1104 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 FOXR1Q6PIV2 292 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 FAM89AQ96GI7 184 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 MAP3K14Q99558 947 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 RHOXF2Q9BQY4 288 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 CEP126Q9P2H0 1117 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 MAN1B1Q9UKM7 699 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 HPSEQ9Y251 543 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 STRCQ7RTU9 1775 aa15.11■□□□□ 0.01
CAPN1-202ENST00000524773 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
CAPN1-202ENST00000524773 CABP4P57796 275 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 CCDC158Q5M9N0 1113 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 CCDC191Q8NCU4 936 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 FEZ2Q9UHY8 353 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-202ENST00000524773 MRFAP1Q9Y605 127 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 SNAP23O00161 211 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 DHX16O60231 1041 aaKnown RBP15.1■□□□□ 0.01
CAPN1-202ENST00000524773 CCDC102BQ68D86 513 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 PLBD2Q8NHP8 589 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 HINFPQ9BQA5 517 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 FUT8Q9BYC5 575 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 PDE11AQ9HCR9 933 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 ARFGAP3Q9NP61 516 aa15.1■□□□□ 0.01
CAPN1-202ENST00000524773 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
CAPN1-202ENST00000524773 PHRF1Q9P1Y6 1649 aaKnown RBP15.09■□□□□ 0.01
CAPN1-202ENST00000524773 H7C1W4 665 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 ARHGAP6O43182 974 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 ZSCAN12O43309 604 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 AFMP43652 599 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 NR5A1Q13285 461 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 LONRF2Q1L5Z9 754 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 RRP12Q5JTH9 1297 aaKnown RBP15.09■□□□□ 0.01
CAPN1-202ENST00000524773 TULP2O00295 520 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 CBFA2T2O43439 604 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-202ENST00000524773 CTDSPL2Q05D32 466 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 ZSCAN26Q16670 478 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 PNKPQ96T60 521 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 TOMM22Q9NS69 142 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 VPS18Q9P253 973 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-202ENST00000524773 SLC9C2Q5TAH2 1124 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 RESP18Q5W5W9 173 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 RAD9BQ6WBX8 426 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 ADAM21Q9UKJ8 722 aa15.09■□□□□ 0.01
CAPN1-202ENST00000524773 FAM205CA6NFA0 338 aa15.08■□□□□ 0
CAPN1-202ENST00000524773 CDC25AP30304 524 aa15.08■□□□□ 0
CAPN1-202ENST00000524773 TAF7LQ5H9L4 462 aa15.08■□□□□ 0
CAPN1-202ENST00000524773 APOA5Q6Q788 366 aa15.08■□□□□ 0
CAPN1-202ENST00000524773 CDC5LQ99459 802 aaKnown RBP15.08■□□□□ 0
CAPN1-202ENST00000524773 UBN2Q6ZU65 1347 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 TOB1P50616 345 aaPredicted RBP15.07■□□□□ 0
CAPN1-202ENST00000524773 TRDNQ13061 729 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 SPECC1LQ69YQ0 1117 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 RSRC2Q7L4I2 434 aaKnown RBP15.07■□□□□ 0
CAPN1-202ENST00000524773 GDAP1L1Q96MZ0 367 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.07■□□□□ 0
CAPN1-202ENST00000524773 ANGEL1Q9UNK9 670 aaKnown RBP15.07■□□□□ 0
CAPN1-202ENST00000524773 TFR2Q9UP52 801 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 PCDHB6Q9Y5E3 794 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 RFX7Q2KHR2 1363 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 IARSP41252 1262 aaKnown RBP15.07■□□□□ 0
CAPN1-202ENST00000524773 MCAMP43121 646 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 KCNJ6P48051 423 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 CCDC57Q2TAC2 916 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 ACRBPQ8NEB7 543 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 HELBQ8NG08 1087 aaPredicted RBP15.07■□□□□ 0
CAPN1-202ENST00000524773 OXER1Q8TDS5 423 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 ALS2Q96Q42 1657 aa15.07■□□□□ 0
CAPN1-202ENST00000524773 GOLGA8AA7E2F4 631 aa15.06■□□□□ 0
CAPN1-202ENST00000524773 SMIM22K7EJ46 135 aa15.06■□□□□ 0
CAPN1-202ENST00000524773 RBL2Q08999 1139 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms