RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 SENP6Q9GZR1 1112 aaPredicted RBP14.07□□□□□ -0.16
CTNNA1-234ENST00000522227 PRKAG2Q9UGJ0 569 aa14.07□□□□□ -0.16
CTNNA1-234ENST00000522227 PTPRAP18433 802 aa14.06□□□□□ -0.16
CTNNA1-234ENST00000522227 HDLBPQ00341 1268 aaKnown RBP14.06□□□□□ -0.16
CTNNA1-234ENST00000522227 TREML2Q5T2D2 321 aa14.06□□□□□ -0.16
CTNNA1-234ENST00000522227 FKBP1CQ5VVH2 108 aa14.06□□□□□ -0.16
CTNNA1-234ENST00000522227 TSPYL6Q8N831 410 aa14.06□□□□□ -0.16
CTNNA1-234ENST00000522227 GJD2Q9UKL4 321 aa14.06□□□□□ -0.16
CTNNA1-234ENST00000522227 RPAP1Q9BWH6 1393 aaPredicted RBP14.06□□□□□ -0.16
CTNNA1-234ENST00000522227 SLURP2P0DP57 97 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 CCND3P30281 292 aaPredicted RBP14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 FOXO4P98177 505 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 NFIAQ12857 509 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 FAM110CQ1W6H9 321 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 LMBR1LQ6UX01 489 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 SCYL3Q8IZE3 742 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 RUNDC1Q96C34 613 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 MYH16Q9H6N6 1097 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 AFG3L2Q9Y4W6 797 aa14.05□□□□□ -0.16
CTNNA1-234ENST00000522227 CACNB2Q08289 660 aaPredicted RBP14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 UBE4AQ14139 1066 aa14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 CCDC57Q2TAC2 916 aa14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 ZFPM1Q8IX07 1006 aa14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 ADAMTS19Q8TE59 1207 aa14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 STK31Q9BXU1 1019 aa14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 PUS3Q9BZE2 481 aaKnown RBP14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 PRDM5Q9NQX1 630 aaPredicted RBP14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 AGTPBP1Q9UPW5 1226 aa14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 SLC45A1Q9Y2W3 748 aa14.04□□□□□ -0.16
CTNNA1-234ENST00000522227 PEX10O60683 326 aa14.03□□□□□ -0.16
CTNNA1-234ENST00000522227 ZNF853P0CG23 659 aa14.03□□□□□ -0.16
CTNNA1-234ENST00000522227 SMAD3P84022 425 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-234ENST00000522227 GRIN2CQ14957 1233 aa14.03□□□□□ -0.16
CTNNA1-234ENST00000522227 CDC42EP5Q6NZY7 148 aa14.03□□□□□ -0.16
CTNNA1-234ENST00000522227 TBC1D22AQ8WUA7 517 aa14.03□□□□□ -0.16
CTNNA1-234ENST00000522227 ATP11BQ9Y2G3 1177 aa14.03□□□□□ -0.16
CTNNA1-234ENST00000522227 RTP1P59025 263 aa14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 GNAI1P63096 354 aa14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 EPHA10Q5JZY3 1008 aa14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 MAP3K21Q5TCX8 1036 aa14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 LHX8Q68G74 356 aa14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 BADQ92934 168 aa14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 UHRF1Q96T88 793 aaPredicted RBP14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 FAM198AQ9UFP1 575 aa14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 PNMA3Q9UL41 463 aa14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 LRRFIP2Q9Y608 721 aaKnown RBP14.02□□□□□ -0.17
CTNNA1-234ENST00000522227 MAST3O60307 1309 aa14.01□□□□□ -0.17
CTNNA1-234ENST00000522227 PHF20L1A8MW92 1017 aa14.01□□□□□ -0.17
CTNNA1-234ENST00000522227 ZKSCAN1P17029 563 aaPredicted RBP14.01□□□□□ -0.17
CTNNA1-234ENST00000522227 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
CTNNA1-234ENST00000522227 CCL14Q16627 93 aa14.01□□□□□ -0.17
CTNNA1-234ENST00000522227 FBXO33Q7Z6M2 555 aa14.01□□□□□ -0.17
CTNNA1-234ENST00000522227 ZSCAN29Q8IWY8 852 aaPredicted RBP14.01□□□□□ -0.17
CTNNA1-234ENST00000522227 IFT57Q9NWB7 429 aa14.01□□□□□ -0.17
CTNNA1-234ENST00000522227 SLC4A2P04920 1241 aa14□□□□□ -0.17
CTNNA1-234ENST00000522227 DIXDC1Q155Q3 683 aa14□□□□□ -0.17
CTNNA1-234ENST00000522227 CAVIN4Q5BKX8 364 aa14□□□□□ -0.17
CTNNA1-234ENST00000522227 HHIPL2Q6UWX4 724 aa14□□□□□ -0.17
CTNNA1-234ENST00000522227 IL27Q8NEV9 243 aa14□□□□□ -0.17
CTNNA1-234ENST00000522227 DNAAF4Q8WXU2 420 aa14□□□□□ -0.17
CTNNA1-234ENST00000522227 NECAB3Q96P71 396 aaPredicted RBP14□□□□□ -0.17
CTNNA1-234ENST00000522227 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
CTNNA1-234ENST00000522227 USP40Q9NVE5 1235 aa14□□□□□ -0.17
CTNNA1-234ENST00000522227 DAGLAQ9Y4D2 1042 aa14□□□□□ -0.17
CTNNA1-234ENST00000522227 PLXNB2O15031 1838 aa13.99□□□□□ -0.17
CTNNA1-234ENST00000522227 FKBP5Q13451 457 aaPredicted RBP13.99□□□□□ -0.17
CTNNA1-234ENST00000522227 WDR43Q15061 677 aaKnown RBP eCLIP13.99□□□□□ -0.17
CTNNA1-234ENST00000522227 CCDC85BQ15834 202 aaPredicted RBP13.99□□□□□ -0.17
CTNNA1-234ENST00000522227 LINS1Q8NG48 757 aa13.99□□□□□ -0.17
CTNNA1-234ENST00000522227 ASB2Q96Q27 587 aa13.99□□□□□ -0.17
CTNNA1-234ENST00000522227 NUDT12Q9BQG2 462 aa13.99□□□□□ -0.17
CTNNA1-234ENST00000522227 MRIQ9BWK5 157 aa13.99□□□□□ -0.17
CTNNA1-234ENST00000522227 PTPRFP10586 1907 aa13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 CNGA1P29973 690 aa13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 ZEB1P37275 1124 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 GCLCP48506 637 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 THEGQ9P2T0 379 aa13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 LTBP2Q14767 1821 aa13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 MAST2Q6P0Q8 1798 aa13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 MUC3AQ02505 3323 aa13.98□□□□□ -0.17
CTNNA1-234ENST00000522227 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 HMGCS2P54868 508 aa13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 SPP2Q13103 211 aa13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 ALYREFQ86V81 257 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 ATXN2LQ8WWM7 1075 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 TSR2Q969E8 191 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 RNPC3Q96LT9 517 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 HCN4Q9Y3Q4 1203 aa13.97□□□□□ -0.17
CTNNA1-234ENST00000522227 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 RGS3P49796 1198 aa13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 MRPS5P82675 430 aaKnown RBP13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 FLIIQ13045 1269 aa13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 POTEEQ6S8J3 1075 aa13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 SH3BP5LQ7L8J4 393 aa13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 SH3RF1Q7Z6J0 888 aa13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 CCAR1Q8IX12 1150 aaKnown RBP13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 ADAMTS8Q9UP79 889 aa13.96□□□□□ -0.17
CTNNA1-234ENST00000522227 F6X3S4 739 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms