RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ANKRD7Q92527 254 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 RABGGTAQ92696 567 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 UIMC1Q96RL1 719 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 KIAA1468Q9P260 1216 aa8.3□□□□□ -1.08
NIPBL-208ENST00000514335 DDX41Q9UJV9 622 aaKnown RBP8.3□□□□□ -1.08
NIPBL-208ENST00000514335 PARD3Q8TEW0 1356 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 MTRF1O75570 445 aaKnown RBP8.29□□□□□ -1.08
NIPBL-208ENST00000514335 PRPHP41219 470 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 POSTNQ15063 836 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 CCSAPQ6IQ19 270 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-208ENST00000514335 RBM33Q96EV2 1170 aaKnown RBP8.29□□□□□ -1.08
NIPBL-208ENST00000514335 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
NIPBL-208ENST00000514335 TSGA10Q9BZW7 698 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 XPO7Q9UIA9 1087 aaKnown RBP8.29□□□□□ -1.08
NIPBL-208ENST00000514335 ABCA3Q99758 1704 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 RECKO95980 971 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 SFSWAPQ12872 951 aaKnown RBP8.29□□□□□ -1.08
NIPBL-208ENST00000514335 SAFB2Q14151 953 aaKnown RBP eCLIP8.29□□□□□ -1.08
NIPBL-208ENST00000514335 MMS22LQ6ZRQ5 1243 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 EXOC6Q8TAG9 804 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 ANKRD49Q8WVL7 239 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 TAOK3Q9H2K8 898 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 AVENQ9NQS1 362 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-208ENST00000514335 ATAD2Q6PL18 1390 aa8.29□□□□□ -1.08
NIPBL-208ENST00000514335 IFT172Q9UG01 1749 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 GRXCR2A6NFK2 248 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 MYCP01106 439 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-208ENST00000514335 GLULP15104 373 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 HDAC4P56524 1084 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 NFE2L2Q16236 605 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 MIGA1Q8NAN2 632 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 DDX12PQ92771 950 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 TNMDQ9H2S6 317 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 DIAPH3Q9NSV4 1193 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 MSH6P52701 1360 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 TECPR2O15040 1411 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 RPL17P18621 184 aaKnown RBP8.28□□□□□ -1.08
NIPBL-208ENST00000514335 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
NIPBL-208ENST00000514335 CDR1P51861 262 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 COX10Q12887 443 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 MAPRE1Q15691 268 aaKnown RBP8.28□□□□□ -1.08
NIPBL-208ENST00000514335 SLC4A8Q2Y0W8 1093 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
NIPBL-208ENST00000514335 CHPFQ8IZ52 775 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 GIMAP8Q8ND71 665 aaPredicted RBP8.28□□□□□ -1.08
NIPBL-208ENST00000514335 ZBTB10Q96DT7 871 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 SIN3AQ96ST3 1273 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 SH3GL1Q99961 368 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 IFT57Q9NWB7 429 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 DDX56Q9NY93 547 aaKnown RBP8.28□□□□□ -1.08
NIPBL-208ENST00000514335 FBXL5Q9UKA1 691 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 GTF3C4Q9UKN8 822 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
NIPBL-208ENST00000514335 FAM25EA8MYX2 175 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-208ENST00000514335 INPP5BP32019 993 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
NIPBL-208ENST00000514335 DCTN1Q14203 1278 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 ARHGEF6Q15052 776 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 RASA2Q15283 850 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 Q3C1V9 767 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 RRP12Q5JTH9 1297 aaKnown RBP8.27□□□□□ -1.09
NIPBL-208ENST00000514335 TMC2Q8TDI7 906 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 PTPRHQ9HD43 1115 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 POLG2Q9UHN1 485 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 CTNNA3Q9UI47 895 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 SSX2IPQ9Y2D8 614 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 MRPL42Q9Y6G3 142 aaKnown RBP8.27□□□□□ -1.09
NIPBL-208ENST00000514335 PLEKHG2Q9H7P9 1386 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 TRIM21P19474 475 aaKnown RBP8.27□□□□□ -1.09
NIPBL-208ENST00000514335 SCNN1BP51168 640 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 IRGCQ6NXR0 463 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 TMC6Q7Z403 805 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 WDR75Q8IWA0 830 aaKnown RBP8.27□□□□□ -1.09
NIPBL-208ENST00000514335 ARL6IP6Q8N6S5 226 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 HDAC7Q8WUI4 952 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 SLC35B4Q969S0 331 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 RUNDC1Q96C34 613 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 KCTD5Q9NXV2 234 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 PRELID1Q9Y255 219 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 NUDCQ9Y266 331 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 NRAPQ86VF7 1730 aa8.27□□□□□ -1.09
NIPBL-208ENST00000514335 RASA4O43374 803 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 KIAA0754O94854 1291 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 RPSAP08865 295 aaKnown RBP8.26□□□□□ -1.09
NIPBL-208ENST00000514335 HSPA1AP0DMV8 641 aaKnown RBP8.26□□□□□ -1.09
NIPBL-208ENST00000514335 HSPA1BP0DMV9 641 aaKnown RBP8.26□□□□□ -1.09
NIPBL-208ENST00000514335 CSE1LP55060 971 aaKnown RBP8.26□□□□□ -1.09
NIPBL-208ENST00000514335 CBLBQ13191 982 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 WTAPQ15007 396 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 GPR162Q16538 588 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 NOP9Q86U38 636 aaKnown RBP8.26□□□□□ -1.09
NIPBL-208ENST00000514335 CEP57L1Q8IYX8 460 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 PIBF1Q8WXW3 757 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
NIPBL-208ENST00000514335 CRYBG1Q9Y4K1 1723 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 MAGEA9P43362 315 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 UBASH3AP57075 661 aa8.26□□□□□ -1.09
NIPBL-208ENST00000514335 UBXN2AP68543 259 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms