RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 GAKO14976 1311 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 APPP05067 770 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 BTDP43251 543 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 NOGQ13253 232 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 ANGEL2Q5VTE6 544 aaKnown RBP12.16□□□□□ -0.46
NEDD9-214ENST00000513989 APOBEC3HQ6NTF7 200 aaKnown RBP12.16□□□□□ -0.46
NEDD9-214ENST00000513989 RGMBQ6NW40 437 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 DCPSQ96C86 337 aaKnown RBP12.16□□□□□ -0.46
NEDD9-214ENST00000513989 CDCA5Q96FF9 252 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 BEGAINQ9BUH8 593 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
NEDD9-214ENST00000513989 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
NEDD9-214ENST00000513989 RAD50Q92878 1312 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 ARAP2Q8WZ64 1704 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 PATL2C9JE40 543 aaKnown RBP12.15□□□□□ -0.46
NEDD9-214ENST00000513989 GPAA1O43292 621 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 CA12O43570 354 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 REC8O95072 547 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 MBD4O95243 580 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 USP5P45974 858 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 AMOTL1Q8IY63 956 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 TEX11Q8IYF3 940 aa12.15□□□□□ -0.46
NEDD9-214ENST00000513989 PRMT6Q96LA8 375 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-214ENST00000513989 STRBPQ96SI9 672 aaKnown RBP12.15□□□□□ -0.46
NEDD9-214ENST00000513989 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
NEDD9-214ENST00000513989 HTTP42858 3142 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 WNT10BO00744 389 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 SGSM2O43147 1006 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 SLC10A3P09131 477 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 TNNI2P48788 182 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 TNFAIP1Q13829 316 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 CDC42EP5Q6NZY7 148 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 ZNF384Q8TF68 577 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 RIOK1Q9BRS2 568 aaKnown RBP12.14□□□□□ -0.47
NEDD9-214ENST00000513989 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 CTNNA3Q9UI47 895 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 SLC4A4Q9Y6R1 1079 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 RPAP1Q9BWH6 1393 aaPredicted RBP12.14□□□□□ -0.47
NEDD9-214ENST00000513989 OTOFQ9HC10 1997 aa12.14□□□□□ -0.47
NEDD9-214ENST00000513989 A0A0D9SFI3 127 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 M0R2C6 588 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 DYNLL1P63167 89 aaKnown RBP12.13□□□□□ -0.47
NEDD9-214ENST00000513989 KIF23Q02241 960 aaPredicted RBP12.13□□□□□ -0.47
NEDD9-214ENST00000513989 NBPF9Q3BBW0 867 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 FKBP1CQ5VVH2 108 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 MOB2Q70IA6 237 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 ADGRA1Q86SQ6 560 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 C2orf69Q8N8R5 385 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
NEDD9-214ENST00000513989 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 SEC62Q99442 399 aaKnown RBP12.13□□□□□ -0.47
NEDD9-214ENST00000513989 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
NEDD9-214ENST00000513989 UPF2Q9HAU5 1272 aaKnown RBP12.13□□□□□ -0.47
NEDD9-214ENST00000513989 ZNF70Q9UC06 446 aaPredicted RBP12.13□□□□□ -0.47
NEDD9-214ENST00000513989 CENPFP49454 3210 aa12.13□□□□□ -0.47
NEDD9-214ENST00000513989 CCDC171Q6TFL3 1326 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 PITPNM2Q9BZ72 1349 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
NEDD9-214ENST00000513989 CHGBP05060 677 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
NEDD9-214ENST00000513989 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 RASAL3Q86YV0 1011 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
NEDD9-214ENST00000513989 LCORLQ8N3X6 602 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 ZBED3Q96IU2 234 aaPredicted RBP12.12□□□□□ -0.47
NEDD9-214ENST00000513989 IDI2Q9BXS1 227 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 VEZTQ9HBM0 779 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 ANO2Q9NQ90 1003 aa12.12□□□□□ -0.47
NEDD9-214ENST00000513989 CLRN2A0PK11 232 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 EPB41L2O43491 1005 aaKnown RBP12.11□□□□□ -0.47
NEDD9-214ENST00000513989 ENTPD3O75355 529 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 POLR3DP05423 398 aaPredicted RBP12.11□□□□□ -0.47
NEDD9-214ENST00000513989 SLC3A2P08195 630 aaKnown RBP12.11□□□□□ -0.47
NEDD9-214ENST00000513989 TDO2P48775 406 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 RGS19P49795 217 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 RHBDL3P58872 404 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 ALX1Q15699 326 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 PRAMEF18Q5VWM3 479 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 CCDC129Q6ZRS4 1044 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 CSRNP1Q96S65 589 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 DSCC1Q9BVC3 393 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 NAPBQ9H115 298 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 DHX36Q9H2U1 1008 aaKnown RBP12.11□□□□□ -0.47
NEDD9-214ENST00000513989 RNF186Q9NXI6 227 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 SAGE1Q9NXZ1 904 aa12.11□□□□□ -0.47
NEDD9-214ENST00000513989 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
NEDD9-214ENST00000513989 CCDC85CA6NKD9 419 aa12.1□□□□□ -0.47
NEDD9-214ENST00000513989 TCP10L2B9ZVM9 353 aa12.1□□□□□ -0.47
NEDD9-214ENST00000513989 HSPD1P10809 573 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1691 ms