RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PRKAB2O43741 272 aa12.91□□□□□ -0.34
PFDN1-204ENST00000512707 FGAP02671 866 aa12.91□□□□□ -0.34
PFDN1-204ENST00000512707 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
PFDN1-204ENST00000512707 CREB3L3Q68CJ9 461 aa12.91□□□□□ -0.34
PFDN1-204ENST00000512707 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
PFDN1-204ENST00000512707 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
PFDN1-204ENST00000512707 MCM9Q9NXL9 1143 aa12.91□□□□□ -0.34
PFDN1-204ENST00000512707 IQCA1LA6NCM1 817 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 GLTPD2A6NH11 291 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 SLC27A2O14975 620 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 DDNO94850 711 aaPredicted RBP12.9□□□□□ -0.34
PFDN1-204ENST00000512707 POLR3DP05423 398 aaPredicted RBP12.9□□□□□ -0.34
PFDN1-204ENST00000512707 PSMA5P28066 241 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 TNNI2P48788 182 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 RHBDL3P58872 404 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 PICALMQ13492 652 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 TNFAIP1Q13829 316 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 RNF41Q9H4P4 317 aaPredicted RBP12.9□□□□□ -0.34
PFDN1-204ENST00000512707 ZNF287Q9HBT7 754 aa12.9□□□□□ -0.34
PFDN1-204ENST00000512707 DCP1AQ9NPI6 582 aaPredicted RBP12.9□□□□□ -0.34
PFDN1-204ENST00000512707 FLT1P17948 1338 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 ENTPD3O75355 529 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 HLA-DOAP06340 250 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 FSTL1Q12841 308 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 TRDNQ13061 729 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 TBC1D10BQ4KMP7 808 aaPredicted RBP12.89□□□□□ -0.35
PFDN1-204ENST00000512707 SBK1Q52WX2 424 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
PFDN1-204ENST00000512707 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 TTC6Q86TZ1 520 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 L3MBTL3Q96JM7 780 aaPredicted RBP12.89□□□□□ -0.35
PFDN1-204ENST00000512707 PRMT6Q96LA8 375 aaPredicted RBP12.89□□□□□ -0.35
PFDN1-204ENST00000512707 IDI2Q9BXS1 227 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 TDRD3Q9H7E2 651 aaKnown RBP12.89□□□□□ -0.35
PFDN1-204ENST00000512707 EPB41L4AQ9HCS5 686 aaPredicted RBP12.89□□□□□ -0.35
PFDN1-204ENST00000512707 ADARB2Q9NS39 739 aaKnown RBP12.89□□□□□ -0.35
PFDN1-204ENST00000512707 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
PFDN1-204ENST00000512707 MINDY4BA8MYZ0 360 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 USP17L12C9JPN9 530 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 USP17L21D6R901 530 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 WNT10BO00744 389 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 FOXP2O15409 715 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 HMGB1P09429 215 aaKnown RBP12.88□□□□□ -0.35
PFDN1-204ENST00000512707 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
PFDN1-204ENST00000512707 PPARAQ07869 468 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 RALYLQ86SE5 291 aaKnown RBP12.88□□□□□ -0.35
PFDN1-204ENST00000512707 JMYQ8N9B5 988 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 DHX36Q9H2U1 1008 aaKnown RBP12.88□□□□□ -0.35
PFDN1-204ENST00000512707 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 VEZTQ9HBM0 779 aa12.88□□□□□ -0.35
PFDN1-204ENST00000512707 ZNF70Q9UC06 446 aaPredicted RBP12.88□□□□□ -0.35
PFDN1-204ENST00000512707 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 CLRN2A0PK11 232 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 WDHD1O75717 1129 aaPredicted RBP12.87□□□□□ -0.35
PFDN1-204ENST00000512707 CYP21A2P08686 494 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
PFDN1-204ENST00000512707 NT5C2P49902 561 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 HAND2P61296 217 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 PDE4BQ07343 736 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 RABEP1Q15276 862 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 TSGA10IPQ3SY00 556 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 APOBEC3FQ8IUX4 373 aaKnown RBP12.87□□□□□ -0.35
PFDN1-204ENST00000512707 ZSCAN29Q8IWY8 852 aaPredicted RBP12.87□□□□□ -0.35
PFDN1-204ENST00000512707 KCNB2Q92953 911 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 ZBED3Q96IU2 234 aaPredicted RBP12.87□□□□□ -0.35
PFDN1-204ENST00000512707 OSBPL5Q9H0X9 879 aaPredicted RBP12.87□□□□□ -0.35
PFDN1-204ENST00000512707 SAP30BPQ9UHR5 308 aaKnown RBP12.87□□□□□ -0.35
PFDN1-204ENST00000512707 ANAPC4Q9UJX5 808 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 SNX14Q9Y5W7 946 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 NAV1Q8NEY1 1877 aa12.87□□□□□ -0.35
PFDN1-204ENST00000512707 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
PFDN1-204ENST00000512707 TCP10L2B9ZVM9 353 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 EPS15P42566 896 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 CACNB3P54284 484 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 NBPF9Q3BBW0 867 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 USP50Q70EL3 339 aaPredicted RBP12.86□□□□□ -0.35
PFDN1-204ENST00000512707 FAM83AQ86UY5 434 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
PFDN1-204ENST00000512707 KRT23Q9C075 422 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
PFDN1-204ENST00000512707 PCDHAC2Q9Y5I4 1007 aa12.86□□□□□ -0.35
PFDN1-204ENST00000512707 SHTN1A0MZ66 631 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 E7EWF7 191 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 ST18O60284 1047 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
PFDN1-204ENST00000512707 TCP10Q12799 353 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 NFIAQ12857 509 aa12.85□□□□□ -0.35
PFDN1-204ENST00000512707 AKNAD1Q5T1N1 836 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms