RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 DYNC1I2Q13409 638 aaKnown RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 FRMD4BQ9Y2L6 1034 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 NESP48681 1621 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 DNMBPQ6XZF7 1577 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 TXLNGQ9NUQ3 528 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 BIVM-ERCC5R4GMW8 1640 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 A0A087WUV0 522 aaPredicted RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 NBPF14Q5TI25 921 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 KRT79Q5XKE5 535 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 HELLSQ9NRZ9 838 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 CCDC151A5D8V7 595 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 EIF3CLB5ME19 914 aaKnown RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 VPS52Q8N1B4 723 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 BBOF1Q8ND07 529 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 LZICQ8WZA0 190 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 EIF3CQ99613 913 aaKnown RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 MRPS25P82663 173 aaKnown RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 RETREG2Q8NC44 543 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 COMMD10Q9Y6G5 202 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 CFAP65Q6ZU64 1925 aaKnown RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 RGS16O15492 202 aaPredicted RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 NBPF6Q5VWK0 638 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 MMS22LQ6ZRQ5 1243 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 NBPF4Q96M43 638 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 POGZQ7Z3K3 1410 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 SYNRGQ9UMZ2 1314 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 ANO1Q5XXA6 986 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 C3orf20Q8ND61 904 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 MSH6P52701 1360 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.32□□□□□ -0.92
HTT-208ENST00000510626 GFAPP14136 432 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 KCNJ6P48051 423 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 PPP4R1Q8TF05 950 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 TMEM87BQ96K49 555 aa9.32□□□□□ -0.92
HTT-208ENST00000510626 KIAA0586Q9BVV6 1533 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 KLF18A0A0U1RQI7 1052 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 ATP5HO75947 161 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 EIF3BP55884 814 aaKnown RBP9.31□□□□□ -0.92
HTT-208ENST00000510626 RPS6KA1Q15418 735 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 SLC4A8Q2Y0W8 1093 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 PCDHB15Q9Y5E8 787 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 PHACTR2O75167 634 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 MAGEA9P43362 315 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 RBM6P78332 1123 aaKnown RBP9.31□□□□□ -0.92
HTT-208ENST00000510626 SLC20A2Q08357 652 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 FANCCQ00597 558 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 PCF11O94913 1555 aaKnown RBP9.31□□□□□ -0.92
HTT-208ENST00000510626 HLA-DOAP06340 250 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 PAK1Q13153 545 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 TCERG1LQ5VWI1 586 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 SUN1O94901 812 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 RRAGDQ9NQL2 400 aaPredicted RBP9.31□□□□□ -0.92
HTT-208ENST00000510626 TYW1Q9NV66 732 aaKnown RBP9.31□□□□□ -0.92
HTT-208ENST00000510626 ABCC5O15440 1437 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 KCNH3Q9ULD8 1083 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 BZW2Q9Y6E2 419 aaKnown RBP9.31□□□□□ -0.92
HTT-208ENST00000510626 FOXP2O15409 715 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 TCP1P17987 556 aaKnown RBP9.31□□□□□ -0.92
HTT-208ENST00000510626 PIP4K2CQ8TBX8 421 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 CENPKQ9BS16 269 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 PHLPP2Q6ZVD8 1323 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 CHMLP26374 656 aa9.31□□□□□ -0.92
HTT-208ENST00000510626 DDX27Q96GQ7 796 aaKnown RBP9.31□□□□□ -0.92
HTT-208ENST00000510626 PPP1R2P3Q6NXS1 205 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 SV2BQ7L1I2 683 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 TRIM42Q8IWZ5 723 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 LZTFL1Q9NQ48 299 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 MYL6BP14649 208 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 PSMC4P43686 418 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 BCL2L12Q9HB09 334 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 EPS15L1Q9UBC2 864 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 ANKRD20A3Q5VUR7 823 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 SDCCAG8Q86SQ7 713 aaPredicted RBP9.3□□□□□ -0.92
HTT-208ENST00000510626 VSIG1Q86XK7 387 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 PHBP35232 272 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 CTTNBP2NLQ9P2B4 639 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 PUF60Q9UHX1 559 aaKnown RBP9.3□□□□□ -0.92
HTT-208ENST00000510626 HOXB7P09629 217 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 PNMA8AQ86V59 439 aaPredicted RBP9.3□□□□□ -0.92
HTT-208ENST00000510626 ARHGEF2Q92974 986 aaKnown RBP9.3□□□□□ -0.92
HTT-208ENST00000510626 CCDC97Q96F63 343 aaPredicted RBP9.3□□□□□ -0.92
HTT-208ENST00000510626 CBX8Q9HC52 389 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 ABCA10Q8WWZ4 1543 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 ETF1P62495 437 aaKnown RBP9.3□□□□□ -0.92
HTT-208ENST00000510626 TEX2Q8IWB9 1127 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 PEG3Q9GZU2 1588 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 CALUO43852 315 aaPredicted RBP9.3□□□□□ -0.92
HTT-208ENST00000510626 MRPL50Q8N5N7 158 aaKnown RBP9.3□□□□□ -0.92
HTT-208ENST00000510626 SPZ1Q9BXG8 430 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 AK2P54819 239 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 NBPF20Q3BBV1 942 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 CCDC63Q8NA47 563 aa9.3□□□□□ -0.92
HTT-208ENST00000510626 CRACR2BQ8N4Y2 399 aaPredicted RBP9.29□□□□□ -0.92
HTT-208ENST00000510626 NRBF2Q96F24 287 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 NBPF3Q9H094 633 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 FAM169AQ9Y6X4 670 aa9.29□□□□□ -0.92
HTT-208ENST00000510626 TBC1D8BQ0IIM8 1120 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms