RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 PRRT2Q7Z6L0 340 aaPredicted RBP22.39■■□□□ 1.17
CLDND1-217ENST00000508071 ZSCAN29Q8IWY8 852 aaPredicted RBP22.39■■□□□ 1.17
CLDND1-217ENST00000508071 ZGPATQ8N5A5 531 aaKnown RBP22.39■■□□□ 1.17
CLDND1-217ENST00000508071 GABRQQ9UN88 632 aa22.39■■□□□ 1.17
CLDND1-217ENST00000508071 NR2E3Q9Y5X4 410 aa22.39■■□□□ 1.17
CLDND1-217ENST00000508071 E9PSI1 815 aa22.38■■□□□ 1.17
CLDND1-217ENST00000508071 ENTPD3O75355 529 aa22.38■■□□□ 1.17
CLDND1-217ENST00000508071 FARP2O94887 1054 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-217ENST00000508071 UBTFL1P0CB47 393 aaPredicted RBP22.38■■□□□ 1.17
CLDND1-217ENST00000508071 PTPRAP18433 802 aa22.38■■□□□ 1.17
CLDND1-217ENST00000508071 U2AF1L4Q8WU68 220 aaKnown RBP22.38■■□□□ 1.17
CLDND1-217ENST00000508071 IDI2Q9BXS1 227 aa22.38■■□□□ 1.17
CLDND1-217ENST00000508071 UNC93B1Q9H1C4 597 aa22.38■■□□□ 1.17
CLDND1-217ENST00000508071 LRRFIP2Q9Y608 721 aaKnown RBP22.38■■□□□ 1.17
CLDND1-217ENST00000508071 ATRNL1Q5VV63 1379 aa22.38■■□□□ 1.17
CLDND1-217ENST00000508071 ADCY3O60266 1144 aa22.37■■□□□ 1.17
CLDND1-217ENST00000508071 PHKA1P46020 1223 aa22.37■■□□□ 1.17
CLDND1-217ENST00000508071 SLC45A1Q9Y2W3 748 aa22.37■■□□□ 1.17
CLDND1-217ENST00000508071 AFG3L2Q9Y4W6 797 aa22.37■■□□□ 1.17
CLDND1-217ENST00000508071 PTPRFP10586 1907 aa22.37■■□□□ 1.17
CLDND1-217ENST00000508071 IL15P40933 162 aaPredicted RBP22.36■■□□□ 1.17
CLDND1-217ENST00000508071 DZIP1Q86YF9 867 aaKnown RBP22.36■■□□□ 1.17
CLDND1-217ENST00000508071 SLF2Q8IX21 1173 aa22.36■■□□□ 1.17
CLDND1-217ENST00000508071 SMCR8Q8TEV9 937 aaPredicted RBP22.36■■□□□ 1.17
CLDND1-217ENST00000508071 GAKO14976 1311 aa22.35■■□□□ 1.17
CLDND1-217ENST00000508071 DOCK1Q14185 1865 aa22.35■■□□□ 1.17
CLDND1-217ENST00000508071 TNPO2O14787 897 aaKnown RBP22.35■■□□□ 1.17
CLDND1-217ENST00000508071 SGPL1O95470 568 aa22.35■■□□□ 1.17
CLDND1-217ENST00000508071 FLT3LGP49771 235 aa22.35■■□□□ 1.17
CLDND1-217ENST00000508071 ALDH1L2Q3SY69 923 aa22.35■■□□□ 1.17
CLDND1-217ENST00000508071 ZBTB7BO15156 539 aaPredicted RBP22.34■■□□□ 1.17
CLDND1-217ENST00000508071 CTNND1O60716 968 aaKnown RBP22.34■■□□□ 1.17
CLDND1-217ENST00000508071 INHAP05111 366 aa22.34■■□□□ 1.17
CLDND1-217ENST00000508071 CCDC102BQ68D86 513 aa22.34■■□□□ 1.17
CLDND1-217ENST00000508071 SH3BP5LQ7L8J4 393 aa22.34■■□□□ 1.17
CLDND1-217ENST00000508071 PXYLP1Q8TE99 480 aa22.34■■□□□ 1.17
CLDND1-217ENST00000508071 SMC4Q9NTJ3 1288 aa22.34■■□□□ 1.17
CLDND1-217ENST00000508071 PHIPQ8WWQ0 1821 aa22.34■■□□□ 1.17
CLDND1-217ENST00000508071 DDTLA6NHG4 134 aaPredicted RBP22.33■■□□□ 1.17
CLDND1-217ENST00000508071 TRIM75PA6NK02 468 aa22.33■■□□□ 1.17
CLDND1-217ENST00000508071 ELNP15502 786 aa22.33■■□□□ 1.17
CLDND1-217ENST00000508071 MAP3K10Q02779 954 aa22.33■■□□□ 1.17
CLDND1-217ENST00000508071 ABCF2Q9UG63 623 aa22.33■■□□□ 1.17
CLDND1-217ENST00000508071 HDAC5Q9UQL6 1122 aa22.33■■□□□ 1.17
CLDND1-217ENST00000508071 RFX7Q2KHR2 1363 aa22.33■■□□□ 1.17
CLDND1-217ENST00000508071 DOCK3Q8IZD9 2030 aa22.32■■□□□ 1.16
CLDND1-217ENST00000508071 ZBTB22O15209 634 aa22.32■■□□□ 1.16
CLDND1-217ENST00000508071 TFRCP02786 760 aaKnown RBP22.32■■□□□ 1.16
CLDND1-217ENST00000508071 CAPN2P17655 700 aa22.32■■□□□ 1.16
CLDND1-217ENST00000508071 ADORA1P30542 326 aa22.32■■□□□ 1.16
CLDND1-217ENST00000508071 PICALMQ13492 652 aa22.32■■□□□ 1.16
CLDND1-217ENST00000508071 IRF5Q13568 498 aa22.32■■□□□ 1.16
CLDND1-217ENST00000508071 SPTY2D1Q68D10 685 aaPredicted RBP22.32■■□□□ 1.16
CLDND1-217ENST00000508071 PRO3102Q9H379 93 aa22.32■■□□□ 1.16
CLDND1-217ENST00000508071 PA2G4Q9UQ80 394 aaKnown RBP22.32■■□□□ 1.16
CLDND1-217ENST00000508071 EVI5O60447 810 aa22.31■■□□□ 1.16
CLDND1-217ENST00000508071 BTDP43251 543 aa22.31■■□□□ 1.16
CLDND1-217ENST00000508071 COA7Q96BR5 231 aa22.31■■□□□ 1.16
CLDND1-217ENST00000508071 FAM163AQ96GL9 167 aaPredicted RBP22.31■■□□□ 1.16
CLDND1-217ENST00000508071 DEFB118Q96PH6 123 aa22.31■■□□□ 1.16
CLDND1-217ENST00000508071 DDX4Q9NQI0 724 aaKnown RBP22.31■■□□□ 1.16
CLDND1-217ENST00000508071 TAOK2Q9UL54 1235 aa22.31■■□□□ 1.16
CLDND1-217ENST00000508071 AGTPBP1Q9UPW5 1226 aa22.31■■□□□ 1.16
CLDND1-217ENST00000508071 PDS5AQ29RF7 1337 aaKnown RBP22.31■■□□□ 1.16
CLDND1-217ENST00000508071 SLURP2P0DP57 97 aa22.3■■□□□ 1.16
CLDND1-217ENST00000508071 SLFN5Q08AF3 891 aa22.3■■□□□ 1.16
CLDND1-217ENST00000508071 RASGRF1Q13972 1273 aa22.3■■□□□ 1.16
CLDND1-217ENST00000508071 ANKRD13CQ8N6S4 541 aa22.3■■□□□ 1.16
CLDND1-217ENST00000508071 PNMA3Q9UL41 463 aa22.3■■□□□ 1.16
CLDND1-217ENST00000508071 MROH7-TTC4A0A0A0MT08 1334 aa22.3■■□□□ 1.16
CLDND1-217ENST00000508071 ZNF316A6NFI3 1004 aaPredicted RBP22.29■■□□□ 1.16
CLDND1-217ENST00000508071 COPRSQ9NQ92 184 aa22.29■■□□□ 1.16
CLDND1-217ENST00000508071 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.29■■□□□ 1.16
CLDND1-217ENST00000508071 TIMM10P62072 90 aa22.28■■□□□ 1.16
CLDND1-217ENST00000508071 ERICH6Q7L0X2 663 aa22.28■■□□□ 1.16
CLDND1-217ENST00000508071 CCDC84Q86UT8 332 aaPredicted RBP22.28■■□□□ 1.16
CLDND1-217ENST00000508071 PAK6Q9NQU5 681 aaPredicted RBP22.28■■□□□ 1.16
CLDND1-217ENST00000508071 A0A1W2PPC1 479 aa22.27■■□□□ 1.16
CLDND1-217ENST00000508071 TBC1D12O60347 775 aa22.27■■□□□ 1.16
CLDND1-217ENST00000508071 FAM110CQ1W6H9 321 aa22.27■■□□□ 1.16
CLDND1-217ENST00000508071 TREML2Q5T2D2 321 aa22.27■■□□□ 1.16
CLDND1-217ENST00000508071 GPR75-ASB3A0A0A6YYF3 556 aa22.26■■□□□ 1.15
CLDND1-217ENST00000508071 MECOMQ03112 1051 aa22.26■■□□□ 1.15
CLDND1-217ENST00000508071 PROCA1Q8NCQ7 364 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-217ENST00000508071 API5Q9BZZ5 524 aaKnown RBP22.26■■□□□ 1.15
CLDND1-217ENST00000508071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.26■■□□□ 1.151e-6■■■□□ 18.4
CLDND1-217ENST00000508071 NOB1Q9ULX3 412 aaKnown RBP22.26■■□□□ 1.15
CLDND1-217ENST00000508071 AKAP2Q9Y2D5 859 aa22.26■■□□□ 1.15
CLDND1-217ENST00000508071 A0A1B0GUL7 405 aa22.25■■□□□ 1.15
CLDND1-217ENST00000508071 RHBDL3P58872 404 aa22.25■■□□□ 1.15
CLDND1-217ENST00000508071 MVPQ14764 893 aaKnown RBP22.25■■□□□ 1.15
CLDND1-217ENST00000508071 XAGE2Q96GT9 111 aa22.25■■□□□ 1.15
CLDND1-217ENST00000508071 CRISPLD2Q9H0B8 497 aa22.25■■□□□ 1.15
CLDND1-217ENST00000508071 OSBPL5Q9H0X9 879 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-217ENST00000508071 ATAD5Q96QE3 1844 aa22.24■■□□□ 1.15
CLDND1-217ENST00000508071 NPM3O75607 178 aaKnown RBP22.24■■□□□ 1.15
CLDND1-217ENST00000508071 NECAB2Q7Z6G3 386 aa22.24■■□□□ 1.15
CLDND1-217ENST00000508071 PAWRQ96IZ0 340 aaKnown RBP22.24■■□□□ 1.15
CLDND1-217ENST00000508071 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.24■■□□□ 1.15
CLDND1-217ENST00000508071 ALPK3Q96L96 1907 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms