RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 HELLSQ9NRZ9 838 aa16.2■□□□□ 0.18
UBE2D3-221ENST00000507845 SCAF8Q9UPN6 1271 aaKnown RBP16.2■□□□□ 0.18
UBE2D3-221ENST00000507845 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
UBE2D3-221ENST00000507845 CNTNAP1P78357 1384 aa16.19■□□□□ 0.18
UBE2D3-221ENST00000507845 TCP10L2B9ZVM9 353 aa16.19■□□□□ 0.18
UBE2D3-221ENST00000507845 GPAA1O43292 621 aa16.19■□□□□ 0.18
UBE2D3-221ENST00000507845 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
UBE2D3-221ENST00000507845 STRBPQ96SI9 672 aaKnown RBP16.19■□□□□ 0.18
UBE2D3-221ENST00000507845 DDX4Q9NQI0 724 aaKnown RBP16.19■□□□□ 0.18
UBE2D3-221ENST00000507845 FAM198AQ9UFP1 575 aa16.19■□□□□ 0.18
UBE2D3-221ENST00000507845 ADM5C9JUS6 153 aa16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 TNFAIP1Q13829 316 aa16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 CWC27Q6UX04 472 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 CCDC129Q6ZRS4 1044 aa16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 KRT26Q7Z3Y9 468 aa16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 FAM83AQ86UY5 434 aa16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 SULF1Q8IWU6 871 aa16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 RBM46Q8TBY0 533 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 GLIS2Q9BZE0 524 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 CRNKL1Q9BZJ0 848 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-221ENST00000507845 PRKAB2O43741 272 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 ENTPD3O75355 529 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 TOMM70O94826 608 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 TNNI2P48788 182 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 PICALMQ13492 652 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 RASA3Q14644 834 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 CDC37L1Q7L3B6 337 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 USP48Q86UV5 1035 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 TGFBRAP1Q8WUH2 860 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 DEFB129Q9H1M3 183 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 SIPA1L1O43166 1804 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 FLT1P17948 1338 aa16.17■□□□□ 0.18
UBE2D3-221ENST00000507845 CDC45O75419 566 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 USP5P45974 858 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 TCP10Q12799 353 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 DLK2Q6UY11 383 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 MAPKAPK5Q8IW41 473 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 ZFPM1Q8IX07 1006 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 SDR42E1Q8WUS8 393 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 IL25Q9H293 177 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 PPP2R3BQ9Y5P8 575 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 SLC4A4Q9Y6R1 1079 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 CCDC171Q6TFL3 1326 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 RAD50Q92878 1312 aa16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
UBE2D3-221ENST00000507845 LAMB1P07942 1786 aa16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 RPAP1Q9BWH6 1393 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 ITGBL1O95965 494 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 GNAT2P19087 354 aa16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 RUFY2Q8WXA3 655 aa16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 TEPSINQ96N21 525 aa16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 TMEM39BQ9GZU3 492 aa16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 OSBPL5Q9H0X9 879 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
UBE2D3-221ENST00000507845 GSG1L2A8MUP6 293 aa16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 TRAF5O00463 557 aa16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 FOXP2O15409 715 aa16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 PRAMEF18Q5VWM3 479 aa16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 SH3BP5LQ7L8J4 393 aa16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 CDAN1Q8IWY9 1227 aa16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 CDCA5Q96FF9 252 aa16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 DCP1AQ9NPI6 582 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 ATP8A2Q9NTI2 1148 aa16.14■□□□□ 0.17
UBE2D3-221ENST00000507845 ATRNL1Q5VV63 1379 aa16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 PATL2C9JE40 543 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 SGSM2O43147 1006 aa16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 MFAP1P55081 439 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 FMR1Q06787 632 aaKnown RBP eCLIP16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 VPS53Q5VIR6 699 aa16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 EPB41L4AQ9HCS5 686 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 CREBZFQ9NS37 354 aa16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 SSC5DA1L4H1 1573 aa16.13■□□□□ 0.17
UBE2D3-221ENST00000507845 LAMA4Q16363 1823 aa16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 MYH8P13535 1937 aa16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 DDTLA6NHG4 134 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 EVX2Q03828 476 aa16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 FSTL1Q12841 308 aa16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 NBPF12Q5TAG4 269 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 CASC1Q6TDU7 716 aa16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 PASKQ96RG2 1323 aa16.12■□□□□ 0.17
UBE2D3-221ENST00000507845 HSPD1P10809 573 aaKnown RBP16.11■□□□□ 0.17
UBE2D3-221ENST00000507845 ZSCAN29Q8IWY8 852 aaPredicted RBP16.11■□□□□ 0.17
UBE2D3-221ENST00000507845 IFNL3Q8IZI9 196 aa16.11■□□□□ 0.17
UBE2D3-221ENST00000507845 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
UBE2D3-221ENST00000507845 PALD1Q9ULE6 856 aa16.11■□□□□ 0.17
UBE2D3-221ENST00000507845 APPP05067 770 aa16.1■□□□□ 0.17
UBE2D3-221ENST00000507845 ALX1Q15699 326 aa16.1■□□□□ 0.17
UBE2D3-221ENST00000507845 SUPT20HL1Q3ZLR7 823 aa16.1■□□□□ 0.17
UBE2D3-221ENST00000507845 DDRGK1Q96HY6 314 aa16.1■□□□□ 0.17
UBE2D3-221ENST00000507845 CSRNP1Q96S65 589 aa16.1■□□□□ 0.17
UBE2D3-221ENST00000507845 DHX36Q9H2U1 1008 aaKnown RBP16.1■□□□□ 0.17
UBE2D3-221ENST00000507845 PAPPA2Q9BXP8 1791 aa16.1■□□□□ 0.17
UBE2D3-221ENST00000507845 OTOFQ9HC10 1997 aa16.09■□□□□ 0.17
UBE2D3-221ENST00000507845 USP17L12C9JPN9 530 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms