RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SCYL3Q8IZE3 742 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 KAZALD1Q96I82 304 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 DEFB118Q96PH6 123 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 RNF39Q9H2S5 420 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
NEDD9-210ENST00000505589 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 ARAP2Q8WZ64 1704 aa12.36□□□□□ -0.43
NEDD9-210ENST00000505589 EYA2O00167 538 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 MAP4K4O95819 1239 aaPredicted RBP12.35□□□□□ -0.43
NEDD9-210ENST00000505589 CYP2C8P10632 490 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 GCLCP48506 637 aaPredicted RBP12.35□□□□□ -0.43
NEDD9-210ENST00000505589 MAP3K10Q02779 954 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 MOGSQ13724 837 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 SPTY2D1Q68D10 685 aaPredicted RBP12.35□□□□□ -0.43
NEDD9-210ENST00000505589 GADL1Q6ZQY3 521 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 UNC93B1Q9H1C4 597 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 CEP126Q9P2H0 1117 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 DAGLAQ9Y4D2 1042 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 SALL1Q9NSC2 1324 aa12.35□□□□□ -0.43
NEDD9-210ENST00000505589 INHAP05111 366 aa12.34□□□□□ -0.43
NEDD9-210ENST00000505589 PTPRAP18433 802 aa12.34□□□□□ -0.43
NEDD9-210ENST00000505589 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
NEDD9-210ENST00000505589 CRISPLD2Q9H0B8 497 aa12.34□□□□□ -0.43
NEDD9-210ENST00000505589 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
NEDD9-210ENST00000505589 PAK6Q9NQU5 681 aaPredicted RBP12.34□□□□□ -0.43
NEDD9-210ENST00000505589 GABRQQ9UN88 632 aa12.34□□□□□ -0.43
NEDD9-210ENST00000505589 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.44
NEDD9-210ENST00000505589 TBC1D12O60347 775 aa12.33□□□□□ -0.44
NEDD9-210ENST00000505589 FAM110CQ1W6H9 321 aa12.33□□□□□ -0.44
NEDD9-210ENST00000505589 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
NEDD9-210ENST00000505589 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
NEDD9-210ENST00000505589 PAWRQ96IZ0 340 aaKnown RBP12.33□□□□□ -0.44
NEDD9-210ENST00000505589 MRS2Q9HD23 443 aa12.33□□□□□ -0.44
NEDD9-210ENST00000505589 STAP2Q9UGK3 403 aa12.33□□□□□ -0.44
NEDD9-210ENST00000505589 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
NEDD9-210ENST00000505589 RPTORQ8N122 1335 aa12.33□□□□□ -0.44
NEDD9-210ENST00000505589 AK9Q5TCS8 1911 aa12.33□□□□□ -0.44
NEDD9-210ENST00000505589 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
NEDD9-210ENST00000505589 NFIAQ12857 509 aa12.32□□□□□ -0.44
NEDD9-210ENST00000505589 LRIT3Q3SXY7 679 aa12.32□□□□□ -0.44
NEDD9-210ENST00000505589 TRMT44Q8IYL2 757 aaKnown RBP12.32□□□□□ -0.44
NEDD9-210ENST00000505589 OSBPL5Q9H0X9 879 aaPredicted RBP12.32□□□□□ -0.44
NEDD9-210ENST00000505589 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
NEDD9-210ENST00000505589 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
NEDD9-210ENST00000505589 A0A1B0GUL6 1792 aa12.32□□□□□ -0.44
NEDD9-210ENST00000505589 CEP290O15078 2479 aa12.32□□□□□ -0.44
NEDD9-210ENST00000505589 ANP32CO43423 234 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 NPM3O75607 178 aaKnown RBP12.31□□□□□ -0.44
NEDD9-210ENST00000505589 CIAO1O76071 339 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 HMGCRP04035 888 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 LDHCP07864 332 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 IL15P40933 162 aaPredicted RBP12.31□□□□□ -0.44
NEDD9-210ENST00000505589 RGS3P49796 1198 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 ATP2B3Q16720 1220 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 DZIP1Q86YF9 867 aaKnown RBP12.31□□□□□ -0.44
NEDD9-210ENST00000505589 ANKRD44Q8N8A2 993 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 GDF15Q99988 308 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 USP44Q9H0E7 712 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 AS3MTQ9HBK9 375 aa12.31□□□□□ -0.44
NEDD9-210ENST00000505589 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
NEDD9-210ENST00000505589 ELNP15502 786 aa12.3□□□□□ -0.44
NEDD9-210ENST00000505589 PRDX5P30044 214 aa12.3□□□□□ -0.44
NEDD9-210ENST00000505589 ANKRD13CQ8N6S4 541 aa12.3□□□□□ -0.44
NEDD9-210ENST00000505589 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.3□□□□□ -0.44
NEDD9-210ENST00000505589 AKAP2Q9Y2D5 859 aa12.3□□□□□ -0.44
NEDD9-210ENST00000505589 ZNF316A6NFI3 1004 aaPredicted RBP12.29□□□□□ -0.44
NEDD9-210ENST00000505589 TRIM75PA6NK02 468 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 GSTO1P78417 241 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 CCAR1Q8IX12 1150 aaKnown RBP12.29□□□□□ -0.44
NEDD9-210ENST00000505589 TDHQ8IZJ6 230 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 MRPL50Q8N5N7 158 aaKnown RBP12.29□□□□□ -0.44
NEDD9-210ENST00000505589 DEFB123Q8N688 67 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 ZNF280CQ8ND82 737 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 KLHDC4Q8TBB5 520 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 C11orf49Q9H6J7 331 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
NEDD9-210ENST00000505589 ABCF2Q9UG63 623 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 STXBP5LQ9Y2K9 1186 aa12.29□□□□□ -0.44
NEDD9-210ENST00000505589 PDS5AQ29RF7 1337 aaKnown RBP12.29□□□□□ -0.44
NEDD9-210ENST00000505589 CCDC184Q52MB2 194 aa12.28□□□□□ -0.44
NEDD9-210ENST00000505589 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
NEDD9-210ENST00000505589 ZFPM1Q8IX07 1006 aa12.28□□□□□ -0.44
NEDD9-210ENST00000505589 GTF3C2Q8WUA4 911 aaPredicted RBP12.28□□□□□ -0.44
NEDD9-210ENST00000505589 GINM1Q9NU53 330 aa12.28□□□□□ -0.44
NEDD9-210ENST00000505589 RANBP2P49792 3224 aaKnown RBP12.28□□□□□ -0.44
NEDD9-210ENST00000505589 GAKO14976 1311 aa12.28□□□□□ -0.44
NEDD9-210ENST00000505589 USP17L5A8MUK1 530 aa12.27□□□□□ -0.45
NEDD9-210ENST00000505589 UBTFL1P0CB47 393 aaPredicted RBP12.27□□□□□ -0.45
NEDD9-210ENST00000505589 XRCC5P13010 732 aaKnown RBP12.27□□□□□ -0.45
NEDD9-210ENST00000505589 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.45
NEDD9-210ENST00000505589 SPP2Q13103 211 aa12.27□□□□□ -0.45
NEDD9-210ENST00000505589 ATG9AQ7Z3C6 839 aa12.27□□□□□ -0.45
NEDD9-210ENST00000505589 LRCH3Q96II8 777 aa12.27□□□□□ -0.45
NEDD9-210ENST00000505589 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.45
NEDD9-210ENST00000505589 NOL10Q9BSC4 688 aaKnown RBP12.27□□□□□ -0.45
NEDD9-210ENST00000505589 UBE2OQ9C0C9 1292 aaKnown RBP12.27□□□□□ -0.45
NEDD9-210ENST00000505589 HERC5Q9UII4 1024 aaKnown RBP12.27□□□□□ -0.45
NEDD9-210ENST00000505589 OGDHLQ9ULD0 1010 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms