RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 MYH8P13535 1937 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 IQCA1LA6NCM1 817 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 GSG1L2A8MUP6 293 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 SGSM2O43147 1006 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 GPAA1O43292 621 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 PRKAB2O43741 272 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 ZFYP08048 801 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 SLURP2P0DP57 97 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 CYP7A1P22680 504 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 CACNB3P54284 484 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 FMR1Q06787 632 aaKnown RBP eCLIP5.97□□□□□ -1.457e-6■■□□□ 12.8
LMNB1-208ENST00000504788 C8orf34Q49A92 452 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 CCDC129Q6ZRS4 1044 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 METTL16Q86W50 562 aaKnown RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 DZIP1Q86YF9 867 aaKnown RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 CNTROBQ8N137 903 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 OGFOD1Q8N543 542 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 MIGA1Q8NAN2 632 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 NKX2-3Q8TAU0 364 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 SH3RF3Q8TEJ3 882 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 FSD1Q9BTV5 496 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 DNAJC18Q9H819 358 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 SCUBE2Q9NQ36 999 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 ZNF70Q9UC06 446 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 SCAF8Q9UPN6 1271 aaKnown RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 TACC3Q9Y6A5 838 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 FLT1P17948 1338 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 PTPRFP10586 1907 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 DDTLA6NHG4 134 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 TRIM6-TRIM34B2RNG4 842 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 H7C1D1 291 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 YY1P25490 414 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 GABPAQ06546 454 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 COL9A3Q14050 684 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 DLGAP5Q15398 846 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 ANGEL2Q5VTE6 544 aaKnown RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 FAM83AQ86UY5 434 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 PNMA8AQ86V59 439 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 ZNF526Q8TF50 670 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 SDR42E1Q8WUS8 393 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 RILPL2Q969X0 211 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 NBPF3Q9H094 633 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 ARMT1Q9H993 441 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 DCP1AQ9NPI6 582 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-208ENST00000504788 HELLSQ9NRZ9 838 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 GGA3Q9NZ52 723 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 HDAC9Q9UKV0 1011 aa5.97□□□□□ -1.45
LMNB1-208ENST00000504788 ZMYM6O95789 1325 aa5.96□□□□□ -1.45
LMNB1-208ENST00000504788 ROBO3Q96MS0 1386 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 CLRN2A0PK11 232 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 MBD4O95243 580 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 SEC24BO95487 1268 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 LDHCP07864 332 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 HSPD1P10809 573 aaKnown RBP5.96□□□□□ -1.46
LMNB1-208ENST00000504788 GSTO1P78417 241 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 RBM26Q5T8P6 1007 aaKnown RBP5.96□□□□□ -1.46
LMNB1-208ENST00000504788 LDHDQ86WU2 507 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 ESYT1Q9BSJ8 1104 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.96□□□□□ -1.468e-7■■■□□ 17.2
LMNB1-208ENST00000504788 LSG1Q9H089 658 aaKnown RBP5.96□□□□□ -1.46
LMNB1-208ENST00000504788 GPBP1L1Q9HC44 474 aaPredicted RBP5.96□□□□□ -1.46
LMNB1-208ENST00000504788 ZBTB47Q9UFB7 747 aaPredicted RBP5.96□□□□□ -1.46
LMNB1-208ENST00000504788 TAF6LQ9Y6J9 622 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 CCDC171Q6TFL3 1326 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 RAD50Q92878 1312 aa5.96□□□□□ -1.46
LMNB1-208ENST00000504788 DOCK1Q14185 1865 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 MAGEB6P1A0A0J9YX57 407 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 ADM5C9JUS6 153 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 ENTPD3O75355 529 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 FGRP09769 529 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 LMOD1P29536 600 aaPredicted RBP5.95□□□□□ -1.46
LMNB1-208ENST00000504788 PLCD1P51178 756 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 PTH1RQ03431 593 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 RRP1BQ14684 758 aaKnown RBP5.95□□□□□ -1.46
LMNB1-208ENST00000504788 MCMDC2Q4G0Z9 681 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 CST9Q5W186 159 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 MAP1SQ66K74 1059 aaPredicted RBP5.95□□□□□ -1.46
LMNB1-208ENST00000504788 ZSCAN25Q6NSZ9 544 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 CWC27Q6UX04 472 aaKnown RBP5.95□□□□□ -1.46
LMNB1-208ENST00000504788 SLF2Q8IX21 1173 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 FAM151AQ8WW52 585 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 TMEM39BQ9GZU3 492 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 OSBPL5Q9H0X9 879 aaPredicted RBP5.95□□□□□ -1.46
LMNB1-208ENST00000504788 DEFB129Q9H1M3 183 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 USP40Q9NVE5 1235 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 METRNQ9UJH8 293 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 PHF20L1A8MW92 1017 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 TRAF5O00463 557 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 TOMM70O94826 608 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 FGAP02671 866 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 JAG1P78504 1218 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 RASA3Q14644 834 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 NECTIN1Q15223 517 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 ALX1Q15699 326 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 SBK1Q52WX2 424 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 NBPF12Q5TAG4 269 aaPredicted RBP5.95□□□□□ -1.46
LMNB1-208ENST00000504788 C12orf60Q5U649 245 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 PRAMEF18Q5VWM3 479 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 GIMAP6Q6P9H5 292 aa5.95□□□□□ -1.46
LMNB1-208ENST00000504788 CTR9Q6PD62 1173 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms