RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 MEIS3P2A8K0S8 358 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 FSCN2O14926 492 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 ECEL1O95672 775 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 MAOBP27338 520 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 AFF1P51825 1210 aaKnown RBP7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 INPP5AQ14642 412 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 WIPI1Q5MNZ9 446 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 LRFN4Q6PJG9 635 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 RUFY4Q6ZNE9 571 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 HDXQ7Z353 690 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 LILRB2Q8N423 598 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 MICAL1Q8TDZ2 1067 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 SH3TC2Q8TF17 1288 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 PLPPR2Q96GM1 343 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 TM9SF2Q99805 663 aa7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 CCDC86Q9H6F5 360 aaKnown RBP7.67□□□□□ -1.18
HMGB1P3-201ENST00000502802 A0A1W2PQH9 124 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 LILRB5O75023 590 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 HTR3BO95264 441 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 ALBP02768 609 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 EPXP11678 715 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 MLECQ14165 292 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 NPAS3Q8IXF0 933 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 ZSCAN1Q8NBB4 408 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 ANTXR1Q9H6X2 564 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 TACC3Q9Y6A5 838 aa7.66□□□□□ -1.18
HMGB1P3-201ENST00000502802 DDAH1O94760 285 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 GJB6O95452 261 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 GUCY2CP25092 1073 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 PDE3AQ14432 1141 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 PLEKHG4Q58EX7 1191 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 RNF187Q5TA31 235 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 MSL1Q68DK7 614 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 TTC6Q86TZ1 520 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 WFDC8Q8IUA0 241 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 TAB3Q8N5C8 712 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 KLHL23Q8NBE8 558 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 TMEM40Q8WWA1 233 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 ELMO3Q96BJ8 720 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 CORINQ9Y5Q5 1042 aa7.65□□□□□ -1.18
HMGB1P3-201ENST00000502802 ZNF862O60290 1169 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 CTSBP07858 339 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 PDE4BQ07343 736 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 SUZ12Q15022 739 aaKnown RBP7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 PTPROQ16827 1216 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 APPBP2Q92624 585 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 KLHDC7BQ96G42 594 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 CARD10Q9BWT7 1032 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 FANCLQ9NW38 375 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 GMIPQ9P107 970 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 REV1Q9UBZ9 1251 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 SLC12A7Q9Y666 1083 aa7.64□□□□□ -1.19
HMGB1P3-201ENST00000502802 H3BM21 787 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 M0R082 166 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 CDC45O75419 566 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 LIG1P18858 919 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 PLCG1P19174 1290 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 SRSF11Q05519 484 aaKnown RBP7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 KIF4BQ2VIQ3 1234 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 MTERF2Q49AM1 385 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 HP1BP3Q5SSJ5 553 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 Q6ZNB5 142 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 C8orf86Q6ZUL3 223 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 CYFIP1Q7L576 1253 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 HOMER1Q86YM7 354 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 FAM178BQ8IXR5 827 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 ZNF417Q8TAU3 575 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 ZNF587Q96SQ5 575 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 KANSL2Q9H9L4 492 aa7.63□□□□□ -1.19
HMGB1P3-201ENST00000502802 ESYT3A0FGR9 886 aa7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 SLC22A31A6NKX4 558 aa7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 VSIG8P0DPA2 414 aa7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 RNFT1Q5M7Z0 435 aa7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 TMEM201Q5SNT2 666 aa7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 INTS3Q68E01 1043 aaKnown RBP7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 OVOS1Q6IE37 1185 aa7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 C6orf15Q6UXA7 325 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 C1orf229Q6ZS94 237 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 WDR89Q96FK6 387 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 SLKQ9H2G2 1235 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P3-201ENST00000502802 DCDC2CA8MYV0 355 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 B2RBV5 119 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 TM4SF5O14894 197 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 SLFN14P0C7P3 912 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 NME1P15531 152 aaKnown RBP7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 IBSPP21815 317 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 SETDB1Q15047 1291 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 C2orf27AQ580R0 203 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 CHSY3Q70JA7 882 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 MAP4K3Q8IVH8 894 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 ST13P5Q8NFI4 369 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 EDARADDQ8WWZ3 215 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 ACDQ96AP0 544 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 ATG4CQ96DT6 458 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 USP26Q9BXU7 913 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 TMEM260Q9NX78 707 aa7.61□□□□□ -1.19
HMGB1P3-201ENST00000502802 KDM2BQ8NHM5 1336 aa7.6□□□□□ -1.19
HMGB1P3-201ENST00000502802 PRAMEF27A3QJZ7 478 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms