RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 APPBP2Q92624 585 aa24.12■■□□□ 1.45
CTSD-206ENST00000497544 TMOD2Q9NZR1 351 aa24.12■■□□□ 1.45
CTSD-206ENST00000497544 POLR2AP24928 1970 aaKnown RBP24.11■■□□□ 1.45
CTSD-206ENST00000497544 MAGEB6P1A0A0J9YX57 407 aa24.11■■□□□ 1.45
CTSD-206ENST00000497544 CHGBP05060 677 aa24.11■■□□□ 1.45
CTSD-206ENST00000497544 PLCG2P16885 1265 aa24.11■■□□□ 1.45
CTSD-206ENST00000497544 KIF23Q02241 960 aaPredicted RBP24.11■■□□□ 1.45
CTSD-206ENST00000497544 CDC42EP5Q6NZY7 148 aa24.11■■□□□ 1.45
CTSD-206ENST00000497544 CERS3Q8IU89 383 aa24.11■■□□□ 1.45
CTSD-206ENST00000497544 MIGA1Q8NAN2 632 aa24.11■■□□□ 1.45
CTSD-206ENST00000497544 DCPSQ96C86 337 aaKnown RBP24.11■■□□□ 1.45
CTSD-206ENST00000497544 ZNF70Q9UC06 446 aaPredicted RBP24.11■■□□□ 1.45
CTSD-206ENST00000497544 CLRN2A0PK11 232 aa24.1■■□□□ 1.45
CTSD-206ENST00000497544 DYNLL1P63167 89 aaKnown RBP24.1■■□□□ 1.45
CTSD-206ENST00000497544 DIAPH3Q9NSV4 1193 aa24.1■■□□□ 1.45
CTSD-206ENST00000497544 RFX7Q2KHR2 1363 aa24.1■■□□□ 1.45
CTSD-206ENST00000497544 SPDYE2Q495Y8 402 aa24.09■■□□□ 1.45
CTSD-206ENST00000497544 ZMYM1Q5SVZ6 1142 aa24.09■■□□□ 1.45
CTSD-206ENST00000497544 ANGEL2Q5VTE6 544 aaKnown RBP24.09■■□□□ 1.45
CTSD-206ENST00000497544 RGMBQ6NW40 437 aa24.09■■□□□ 1.45
CTSD-206ENST00000497544 OSBP2Q969R2 916 aa24.09■■□□□ 1.45
CTSD-206ENST00000497544 VEZTQ9HBM0 779 aa24.09■■□□□ 1.45
CTSD-206ENST00000497544 GGA3Q9NZ52 723 aa24.09■■□□□ 1.45
CTSD-206ENST00000497544 ASTN2O75129 1339 aaPredicted RBP24.09■■□□□ 1.45
CTSD-206ENST00000497544 PUS7LQ9H0K6 701 aaKnown RBP24.08■■□□□ 1.45
CTSD-206ENST00000497544 HELLSQ9NRZ9 838 aa24.08■■□□□ 1.45
CTSD-206ENST00000497544 RHBDL3P58872 404 aa24.07■■□□□ 1.44
CTSD-206ENST00000497544 CDC37L1Q7L3B6 337 aa24.07■■□□□ 1.44
CTSD-206ENST00000497544 APOBEC3FQ8IUX4 373 aaKnown RBP24.07■■□□□ 1.44
CTSD-206ENST00000497544 TEX11Q8IYF3 940 aa24.07■■□□□ 1.44
CTSD-206ENST00000497544 SH3RF3Q8TEJ3 882 aaPredicted RBP24.07■■□□□ 1.44
CTSD-206ENST00000497544 RIOK1Q9BRS2 568 aaKnown RBP24.07■■□□□ 1.44
CTSD-206ENST00000497544 ECM29Q5VYK3 1845 aa24.07■■□□□ 1.44
CTSD-206ENST00000497544 TCP10L2B9ZVM9 353 aa24.06■■□□□ 1.44
CTSD-206ENST00000497544 MBD4O95243 580 aa24.06■■□□□ 1.44
CTSD-206ENST00000497544 NMIQ13287 307 aaPredicted RBP24.06■■□□□ 1.44
CTSD-206ENST00000497544 DLK2Q6UY11 383 aa24.06■■□□□ 1.44
CTSD-206ENST00000497544 FAM227BQ96M60 508 aa24.06■■□□□ 1.44
CTSD-206ENST00000497544 ARMT1Q9H993 441 aa24.06■■□□□ 1.44
CTSD-206ENST00000497544 PITPNM2Q9BZ72 1349 aa24.06■■□□□ 1.44
CTSD-206ENST00000497544 CHMLP26374 656 aa24.05■■□□□ 1.44
CTSD-206ENST00000497544 TNNI2P48788 182 aa24.05■■□□□ 1.44
CTSD-206ENST00000497544 CACNB3P54284 484 aa24.05■■□□□ 1.44
CTSD-206ENST00000497544 TNFAIP1Q13829 316 aa24.05■■□□□ 1.44
CTSD-206ENST00000497544 MCMDC2Q4G0Z9 681 aa24.05■■□□□ 1.44
CTSD-206ENST00000497544 CWC27Q6UX04 472 aaKnown RBP24.05■■□□□ 1.44
CTSD-206ENST00000497544 SULF1Q8IWU6 871 aa24.05■■□□□ 1.44
CTSD-206ENST00000497544 LCORLQ8N3X6 602 aa24.05■■□□□ 1.44
CTSD-206ENST00000497544 RUFY2Q8WXA3 655 aa24.05■■□□□ 1.44
CTSD-206ENST00000497544 SEC62Q99442 399 aaKnown RBP24.05■■□□□ 1.44
CTSD-206ENST00000497544 CRNKL1Q9BZJ0 848 aaKnown RBP24.05■■□□□ 1.44
CTSD-206ENST00000497544 DLL1O00548 723 aa24.04■■□□□ 1.44
CTSD-206ENST00000497544 PKN2Q16513 984 aaKnown RBP24.04■■□□□ 1.44
CTSD-206ENST00000497544 FKBP1CQ5VVH2 108 aa24.04■■□□□ 1.44
CTSD-206ENST00000497544 TGFBRAP1Q8WUH2 860 aa24.04■■□□□ 1.44
CTSD-206ENST00000497544 SZT2Q5T011 3432 aa24.04■■□□□ 1.44
CTSD-206ENST00000497544 A0A0D9SFI3 127 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 M0R2C6 588 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 GPAA1O43292 621 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 USP5P45974 858 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 CASC1Q6TDU7 716 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 KRT26Q7Z3Y9 468 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 CCDC102AQ96A19 550 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 CSRNP1Q96S65 589 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 STRBPQ96SI9 672 aaKnown RBP24.03■■□□□ 1.44
CTSD-206ENST00000497544 IDI2Q9BXS1 227 aa24.03■■□□□ 1.44
CTSD-206ENST00000497544 SCAF8Q9UPN6 1271 aaKnown RBP24.03■■□□□ 1.44
CTSD-206ENST00000497544 WDHD1O75717 1129 aaPredicted RBP24.02■■□□□ 1.44
CTSD-206ENST00000497544 PICALMQ13492 652 aa24.02■■□□□ 1.44
CTSD-206ENST00000497544 USP48Q86UV5 1035 aa24.02■■□□□ 1.44
CTSD-206ENST00000497544 CDC45O75419 566 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 GNAT2P19087 354 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 MFAP1P55081 439 aaKnown RBP24.01■■□□□ 1.43
CTSD-206ENST00000497544 TCP10Q12799 353 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 NFIAQ12857 509 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 RASA3Q14644 834 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 CCDC129Q6ZRS4 1044 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 FAM83AQ86UY5 434 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 DEFB129Q9H1M3 183 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 SLC4A4Q9Y6R1 1079 aa24.01■■□□□ 1.43
CTSD-206ENST00000497544 ENTPD3O75355 529 aa24■■□□□ 1.43
CTSD-206ENST00000497544 ZNF157P51786 506 aaPredicted RBP24■■□□□ 1.43
CTSD-206ENST00000497544 MAPKAPK5Q8IW41 473 aa24■■□□□ 1.43
CTSD-206ENST00000497544 FAM151AQ8WW52 585 aa24■■□□□ 1.43
CTSD-206ENST00000497544 GBA2Q9HCG7 927 aaPredicted RBP24■■□□□ 1.43
CTSD-206ENST00000497544 PRKAB2O43741 272 aa23.99■■□□□ 1.43
CTSD-206ENST00000497544 NPM3O75607 178 aaKnown RBP23.99■■□□□ 1.43
CTSD-206ENST00000497544 SDR42E1Q8WUS8 393 aa23.99■■□□□ 1.43
CTSD-206ENST00000497544 DDRGK1Q96HY6 314 aa23.99■■□□□ 1.43
CTSD-206ENST00000497544 DDX4Q9NQI0 724 aaKnown RBP23.99■■□□□ 1.43
CTSD-206ENST00000497544 ATP8A2Q9NTI2 1148 aa23.99■■□□□ 1.43
CTSD-206ENST00000497544 FAM198AQ9UFP1 575 aa23.99■■□□□ 1.43
CTSD-206ENST00000497544 ADM5C9JUS6 153 aa23.98■■□□□ 1.43
CTSD-206ENST00000497544 APPP05067 770 aa23.98■■□□□ 1.43
CTSD-206ENST00000497544 SLC10A3P09131 477 aa23.98■■□□□ 1.43
CTSD-206ENST00000497544 ZSCAN29Q8IWY8 852 aaPredicted RBP23.98■■□□□ 1.43
CTSD-206ENST00000497544 PPP2R3BQ9Y5P8 575 aa23.98■■□□□ 1.43
CTSD-206ENST00000497544 PATL2C9JE40 543 aaKnown RBP23.97■■□□□ 1.43
CTSD-206ENST00000497544 CCDC171Q6TFL3 1326 aa23.97■■□□□ 1.43
CTSD-206ENST00000497544 CDK5RAP2Q96SN8 1893 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms