RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 TMEM87AQ8NBN3 555 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 COA1Q9GZY4 146 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 TOMM22Q9NS69 142 aa16.06■□□□□ 0.16
SPTBN1-205ENST00000496323 PPP4CP60510 307 aa16.05■□□□□ 0.16
SPTBN1-205ENST00000496323 SH3RF3Q8TEJ3 882 aaPredicted RBP16.05■□□□□ 0.16
SPTBN1-205ENST00000496323 ZKSCAN3Q9BRR0 538 aa16.05■□□□□ 0.16
SPTBN1-205ENST00000496323 RTFDC1Q9BY42 306 aaPredicted RBP16.05■□□□□ 0.16
SPTBN1-205ENST00000496323 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 CHMP4CQ96CF2 233 aa16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 MAST2Q6P0Q8 1798 aa16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 MROH7-TTC4A0A0A0MT08 1334 aa16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 CYP2D6P10635 497 aa16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 RXRAP19793 462 aa16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 GTF2IP78347 998 aa16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 FAM173BQ6P4H8 233 aa16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
SPTBN1-205ENST00000496323 DHX16O60231 1041 aaKnown RBP16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 GADD45BO75293 160 aaPredicted RBP16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 CDC27P30260 824 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 ADD1P35611 737 aaKnown RBP16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 SBK1Q52WX2 424 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 TBC1D22AQ8WUA7 517 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 MTA3Q9BTC8 594 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 MYL10Q9BUA6 226 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 PRDM1O75626 825 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 LDHCP07864 332 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 METAP2P50579 478 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 RESTQ13127 1097 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 DOK7Q18PE1 504 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 NFXL1Q6ZNB6 911 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 ESR2Q92731 530 aa16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPTBN1-205ENST00000496323 GPR75-ASB3A0A0A6YYF3 556 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 H3BQV1 296 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 ZBTB43O43298 467 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 BAG3O95817 575 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 USP17L8P0C7I0 530 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 FOSBP53539 338 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 IFFO2Q5TF58 517 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 MICU3Q86XE3 530 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 MCM9Q9NXL9 1143 aa16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 ARPP21Q9UBL0 812 aaPredicted RBP16.02■□□□□ 0.16
SPTBN1-205ENST00000496323 FIBPO43427 364 aa16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 BTDP43251 543 aa16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 SEC23AQ15436 765 aa16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 CAVIN1Q6NZI2 390 aaKnown RBP16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 CERS5Q8N5B7 392 aa16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 SLC12A7Q9Y666 1083 aa16.02■□□□□ 0.15
SPTBN1-205ENST00000496323 CPLX1O14810 134 aa16.01■□□□□ 0.15
SPTBN1-205ENST00000496323 WTAPQ15007 396 aa16.01■□□□□ 0.15
SPTBN1-205ENST00000496323 SART3Q15020 963 aaKnown RBP16.01■□□□□ 0.15
SPTBN1-205ENST00000496323 TMX4Q9H1E5 349 aaPredicted RBP16.01■□□□□ 0.15
SPTBN1-205ENST00000496323 RBM27Q9P2N5 1060 aaKnown RBP16.01■□□□□ 0.15
SPTBN1-205ENST00000496323 KIF3AQ9Y496 699 aa16.01■□□□□ 0.15
SPTBN1-205ENST00000496323 GAKO14976 1311 aa16.01■□□□□ 0.15
SPTBN1-205ENST00000496323 FSD2A1L4K1 749 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 CCDC69A6NI79 296 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 USP5P45974 858 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 NTRK3Q16288 839 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 CNKSR1Q969H4 720 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 ORC3Q9UBD5 711 aaPredicted RBP16■□□□□ 0.15
SPTBN1-205ENST00000496323 TNKSO95271 1327 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 ORC4O43929 436 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 MBD3O95983 291 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 C12orf60Q5U649 245 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 TGFBRAP1Q8WUH2 860 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 UBAC1Q9BSL1 405 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 MXD3Q9BW11 206 aa16■□□□□ 0.15
SPTBN1-205ENST00000496323 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
SPTBN1-205ENST00000496323 NID2Q14112 1375 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 GOLGA8AA7E2F4 631 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 RHBDL3P58872 404 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 GUCY1B3Q02153 619 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 SLC4A8Q2Y0W8 1093 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 ENAHQ8N8S7 591 aaPredicted RBP15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 ZSCAN10Q96SZ4 725 aaPredicted RBP15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 EYA3Q99504 573 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 NOL10Q9BSC4 688 aaKnown RBP15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 QSER1Q2KHR3 1735 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 ERICH2A1L162 156 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 OTUD7BQ6GQQ9 843 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 ZSCAN16Q9H4T2 348 aaPredicted RBP15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 KCNQ5Q9NR82 932 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 TMEM63CQ9P1W3 806 aa15.99■□□□□ 0.15
SPTBN1-205ENST00000496323 KRT85P78386 507 aa15.98■□□□□ 0.15
SPTBN1-205ENST00000496323 GAS2L3Q86XJ1 694 aa15.98■□□□□ 0.15
SPTBN1-205ENST00000496323 CERS3Q8IU89 383 aa15.98■□□□□ 0.15
SPTBN1-205ENST00000496323 PHKBQ93100 1093 aa15.98■□□□□ 0.15
SPTBN1-205ENST00000496323 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
SPTBN1-205ENST00000496323 GJB4Q9NTQ9 266 aa15.98■□□□□ 0.15
SPTBN1-205ENST00000496323 SUGT1Q9Y2Z0 365 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms