RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 TRIM34Q9BYJ4 488 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 GLIS2Q9BZE0 524 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-214ENST00000493786 DEFB129Q9H1M3 183 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 ATP8A2Q9NTI2 1148 aa9.1□□□□□ -0.95
VEGFA-214ENST00000493786 RPAP1Q9BWH6 1393 aaPredicted RBP9.1□□□□□ -0.95
VEGFA-214ENST00000493786 MYH7P12883 1935 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 AK9Q5TCS8 1911 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 ADAMTSL1Q8N6G6 1762 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 FLT1P17948 1338 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 ADM5C9JUS6 153 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 WDHD1O75717 1129 aaPredicted RBP9.09□□□□□ -0.95
VEGFA-214ENST00000493786 POLR3DP05423 398 aaPredicted RBP9.09□□□□□ -0.95
VEGFA-214ENST00000493786 FSTL1Q12841 308 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 NFIAQ12857 509 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 SUPT20HL1Q3ZLR7 823 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 CCDC129Q6ZRS4 1044 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 TTC6Q86TZ1 520 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 SDR42E1Q8WUS8 393 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 TMEM39BQ9GZU3 492 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 OSBPL5Q9H0X9 879 aaPredicted RBP9.09□□□□□ -0.95
VEGFA-214ENST00000493786 NAPBQ9H115 298 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 DHX36Q9H2U1 1008 aaKnown RBP9.09□□□□□ -0.95
VEGFA-214ENST00000493786 DDX4Q9NQI0 724 aaKnown RBP9.09□□□□□ -0.95
VEGFA-214ENST00000493786 MCM9Q9NXL9 1143 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 FAM198AQ9UFP1 575 aa9.09□□□□□ -0.95
VEGFA-214ENST00000493786 SCAF8Q9UPN6 1271 aaKnown RBP9.09□□□□□ -0.95
VEGFA-214ENST00000493786 MYO5AQ9Y4I1 1855 aaKnown RBP9.08□□□□□ -0.96
VEGFA-214ENST00000493786 PATL2C9JE40 543 aaKnown RBP9.08□□□□□ -0.96
VEGFA-214ENST00000493786 PRKAB2O43741 272 aa9.08□□□□□ -0.96
VEGFA-214ENST00000493786 DCAF15Q66K64 600 aa9.08□□□□□ -0.96
VEGFA-214ENST00000493786 GIMAP6Q6P9H5 292 aa9.08□□□□□ -0.96
VEGFA-214ENST00000493786 ZNF589Q86UQ0 364 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-214ENST00000493786 CRACR2BQ8N4Y2 399 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-214ENST00000493786 CDCA5Q96FF9 252 aa9.08□□□□□ -0.96
VEGFA-214ENST00000493786 CSRNP1Q96S65 589 aa9.08□□□□□ -0.96
VEGFA-214ENST00000493786 ESYT1Q9BSJ8 1104 aa9.08□□□□□ -0.96
VEGFA-214ENST00000493786 ZNF408Q9H9D4 720 aa9.08□□□□□ -0.96
VEGFA-214ENST00000493786 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-214ENST00000493786 ARPP21Q9UBL0 812 aaPredicted RBP9.08□□□□□ -0.96
VEGFA-214ENST00000493786 SAP30BPQ9UHR5 308 aaKnown RBP9.08□□□□□ -0.96
VEGFA-214ENST00000493786 SGSM2O43147 1006 aa9.07□□□□□ -0.96
VEGFA-214ENST00000493786 PPP1R12BO60237 982 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-214ENST00000493786 REC8O95072 547 aa9.07□□□□□ -0.96
VEGFA-214ENST00000493786 SLC3A2P08195 630 aaKnown RBP9.07□□□□□ -0.96
VEGFA-214ENST00000493786 HSPD1P10809 573 aaKnown RBP9.07□□□□□ -0.96
VEGFA-214ENST00000493786 TTLL12Q14166 644 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-214ENST00000493786 DSCC1Q9BVC3 393 aa9.07□□□□□ -0.96
VEGFA-214ENST00000493786 ANO2Q9NQ90 1003 aa9.07□□□□□ -0.96
VEGFA-214ENST00000493786 CTNNA3Q9UI47 895 aa9.07□□□□□ -0.96
VEGFA-214ENST00000493786 PALD1Q9ULE6 856 aa9.07□□□□□ -0.96
VEGFA-214ENST00000493786 CNTNAP1P78357 1384 aa9.07□□□□□ -0.96
VEGFA-214ENST00000493786 ECM29Q5VYK3 1845 aa9.07□□□□□ -0.96
VEGFA-214ENST00000493786 COL2A1P02458 1487 aaPredicted RBP9.07□□□□□ -0.96
VEGFA-214ENST00000493786 GSG1L2A8MUP6 293 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 TRAF5O00463 557 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 CELF2O95319 508 aaKnown RBP9.06□□□□□ -0.96
VEGFA-214ENST00000493786 SLC4A8Q2Y0W8 1093 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 PRAMEF18Q5VWM3 479 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 ARMC9Q7Z3E5 817 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 IFNL3Q8IZI9 196 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 C2orf69Q8N8R5 385 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.06□□□□□ -0.96
VEGFA-214ENST00000493786 ZNF287Q9HBT7 754 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 PI4KBQ9UBF8 816 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 HERC5Q9UII4 1024 aaKnown RBP9.06□□□□□ -0.96
VEGFA-214ENST00000493786 ATRNL1Q5VV63 1379 aa9.06□□□□□ -0.96
VEGFA-214ENST00000493786 DDTLA6NHG4 134 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 MINDY4BA8MYZ0 360 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 USP17L12C9JPN9 530 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 USP17L21D6R901 530 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 ITGBL1O95965 494 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 IREB2P48200 963 aaKnown RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 ALX1Q15699 326 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 IMMTQ16891 758 aaKnown RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 SBK1Q52WX2 424 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 NBPF12Q5TAG4 269 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 VPS53Q5VIR6 699 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 CTR9Q6PD62 1173 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 FOXP4Q8IVH2 680 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 ZFPM1Q8IX07 1006 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 TEPSINQ96N21 525 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 ZNF341Q9BYN7 854 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 EHD4Q9H223 541 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 EPB41L4AQ9HCS5 686 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 SERPINB13Q9UIV8 391 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 TAOK2Q9UL54 1235 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 U3KPZ7 1027 aaPredicted RBP9.05□□□□□ -0.96
VEGFA-214ENST00000493786 ZMYM6O95789 1325 aa9.05□□□□□ -0.96
VEGFA-214ENST00000493786 ZNF213O14771 459 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 FGAP02671 866 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 MCCP23508 829 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 FKBP1BP68106 108 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 PDE4BQ07343 736 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 PPARAQ07869 468 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 PRKG1Q13976 671 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 C12orf60Q5U649 245 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 MIGA2Q7L4E1 593 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 SH3BP5LQ7L8J4 393 aa9.04□□□□□ -0.96
VEGFA-214ENST00000493786 MKNK2Q9HBH9 465 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms