RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 STAP2Q9UGK3 403 aa9.8□□□□□ -0.84
TM4SF1-204ENST00000493348 PAPPA2Q9BXP8 1791 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 ADD2P35612 726 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 PPP4CP60510 307 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 UBE3CQ15386 1083 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 PI4K2BQ8TCG2 481 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 SH3RF3Q8TEJ3 882 aaPredicted RBP9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 TGFBRAP1Q8WUH2 860 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 CSRNP1Q96S65 589 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 IDI2Q9BXS1 227 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 ANGEL1Q9UNK9 670 aaKnown RBP9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 CDK5RAP2Q96SN8 1893 aa9.79□□□□□ -0.84
TM4SF1-204ENST00000493348 RPAP1Q9BWH6 1393 aaPredicted RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 FOCADQ5VW36 1801 aa9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 HIP1O00291 1037 aa9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 RNF113AO15541 343 aaKnown RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 ZNF157P51786 506 aaPredicted RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 DYNLL1P63167 89 aaKnown RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 FMR1Q06787 632 aaKnown RBP eCLIP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 NBPF12Q5TAG4 269 aaPredicted RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 MAPKAPK5Q8IW41 473 aa9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 REM2Q8IYK8 340 aaPredicted RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 CRACR2BQ8N4Y2 399 aaPredicted RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 ZNF341Q9BYN7 854 aa9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 DHX36Q9H2U1 1008 aaKnown RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 MKRN1Q9UHC7 482 aaKnown RBP9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 CSADQ9Y600 493 aa9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 TLL2Q9Y6L7 1015 aa9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 NAV1Q8NEY1 1877 aa9.78□□□□□ -0.84
TM4SF1-204ENST00000493348 MBD4O95243 580 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 APPP05067 770 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 POLR3DP05423 398 aaPredicted RBP9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 GNAT2P19087 354 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 NFIAQ12857 509 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 CST9Q5W186 159 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 DLK2Q6UY11 383 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 TTC6Q86TZ1 520 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 TICAM2Q86XR7 235 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 APPBP2Q92624 585 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 CCDC102AQ96A19 550 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 SLC10A4Q96EP9 437 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 NACAP1Q9BZK3 213 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 OSBPL5Q9H0X9 879 aaPredicted RBP9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 OSBPL3Q9H4L5 887 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 DIAPH3Q9NSV4 1193 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 SLC4A4Q9Y6R1 1079 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 MYH8P13535 1937 aa9.77□□□□□ -0.85
TM4SF1-204ENST00000493348 UNCXA6NJT0 531 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 UBE2Q2LH0YL09 131 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 WDHD1O75717 1129 aaPredicted RBP9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 RHBDL3P58872 404 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 HTRA3P83110 453 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 RGMBQ6NW40 437 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 MIGA2Q7L4E1 593 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 ADGRA1Q86SQ6 560 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 SAPCD2Q86UD0 394 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 PIP4P2Q8N4L2 257 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 ZNF384Q8TF68 577 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 HHIPL1Q96JK4 782 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 BEGAINQ9BUH8 593 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 ARMT1Q9H993 441 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 FAM198AQ9UFP1 575 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 FLT1P17948 1338 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 SALL3Q9BXA9 1300 aa9.76□□□□□ -0.85
TM4SF1-204ENST00000493348 CNTNAP1P78357 1384 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 TCRBV5S4A2TA0A5A2 114 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 RASSF10A6NK89 507 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 TTC22Q5TAA0 569 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 CASC1Q6TDU7 716 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 CAPNS2Q96L46 248 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 WRNIP1Q96S55 665 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 ATP8A2Q9NTI2 1148 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 MCM9Q9NXL9 1143 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 PI4KBQ9UBF8 816 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 SAP30BPQ9UHR5 308 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 HERC5Q9UII4 1024 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 BAZ2AQ9UIF9 1905 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 RFX7Q2KHR2 1363 aa9.75□□□□□ -0.85
TM4SF1-204ENST00000493348 COL2A1P02458 1487 aaPredicted RBP9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 SLC3A2P08195 630 aaKnown RBP9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 TDO2P48775 406 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 NOGQ13253 232 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 CYP4F22Q6NT55 531 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 FOXP4Q8IVH2 680 aaPredicted RBP9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 LCORLQ8N3X6 602 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 RUFY2Q8WXA3 655 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 KLRG1Q96E93 195 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 TEPSINQ96N21 525 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 RIOK1Q9BRS2 568 aaKnown RBP9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 PUS7LQ9H0K6 701 aaKnown RBP9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 DDX4Q9NQI0 724 aaKnown RBP9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 PICK1Q9NRD5 415 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 HELLSQ9NRZ9 838 aa9.74□□□□□ -0.85
TM4SF1-204ENST00000493348 WDR33Q9C0J8 1336 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms