RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 DHX36Q9H2U1 1008 aaKnown RBP13.39□□□□□ -0.27
CPSF7-212ENST00000489728 MAGEB6P1A0A0J9YX57 407 aa13.38□□□□□ -0.27
CPSF7-212ENST00000489728 TTLL12Q14166 644 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-212ENST00000489728 TSHZ3Q63HK5 1081 aa13.38□□□□□ -0.27
CPSF7-212ENST00000489728 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
CPSF7-212ENST00000489728 JMYQ8N9B5 988 aa13.38□□□□□ -0.27
CPSF7-212ENST00000489728 EVI5LQ96CN4 794 aa13.38□□□□□ -0.27
CPSF7-212ENST00000489728 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
CPSF7-212ENST00000489728 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-212ENST00000489728 DDX4Q9NQI0 724 aaKnown RBP13.38□□□□□ -0.27
CPSF7-212ENST00000489728 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
CPSF7-212ENST00000489728 DDX60LQ5H9U9 1706 aaKnown RBP13.38□□□□□ -0.27
CPSF7-212ENST00000489728 FLT1P17948 1338 aa13.38□□□□□ -0.27
CPSF7-212ENST00000489728 LAMB1P07942 1786 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 TBC1D12O60347 775 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 MAP2K2P36507 400 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 TCP10Q12799 353 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 NOGQ13253 232 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 MIGA1Q8NAN2 632 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 APPBP2Q92624 585 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 CAPNS2Q96L46 248 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 CSRNP1Q96S65 589 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 MKRN1Q9UHC7 482 aaKnown RBP13.37□□□□□ -0.27
CPSF7-212ENST00000489728 ANGEL1Q9UNK9 670 aaKnown RBP13.37□□□□□ -0.27
CPSF7-212ENST00000489728 OTOFQ9HC10 1997 aa13.37□□□□□ -0.27
CPSF7-212ENST00000489728 WDR33Q9C0J8 1336 aaKnown RBP13.37□□□□□ -0.27
CPSF7-212ENST00000489728 RNF113AO15541 343 aaKnown RBP13.36□□□□□ -0.27
CPSF7-212ENST00000489728 USP2O75604 605 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-212ENST00000489728 SLC10A3P09131 477 aa13.36□□□□□ -0.27
CPSF7-212ENST00000489728 VEGFBP49765 207 aa13.36□□□□□ -0.27
CPSF7-212ENST00000489728 ZNF157P51786 506 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-212ENST00000489728 PICALMQ13492 652 aa13.36□□□□□ -0.27
CPSF7-212ENST00000489728 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-212ENST00000489728 CDAN1Q8IWY9 1227 aa13.36□□□□□ -0.27
CPSF7-212ENST00000489728 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-212ENST00000489728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.36□□□□□ -0.27
CPSF7-212ENST00000489728 HERC5Q9UII4 1024 aaKnown RBP13.36□□□□□ -0.27
CPSF7-212ENST00000489728 FAM155AB1AL88 458 aaPredicted RBP13.35□□□□□ -0.27
CPSF7-212ENST00000489728 UBE2Q2LH0YL09 131 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 DYNLL1P63167 89 aaKnown RBP13.35□□□□□ -0.27
CPSF7-212ENST00000489728 SH3BP5LQ7L8J4 393 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 ZFPM1Q8IX07 1006 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 AIDAQ96BJ3 306 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 FSD1Q9BTV5 496 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 ATP8A2Q9NTI2 1148 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 ZNF112Q9UJU3 913 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 NAV1Q8NEY1 1877 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 AK9Q5TCS8 1911 aa13.35□□□□□ -0.27
CPSF7-212ENST00000489728 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-212ENST00000489728 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
CPSF7-212ENST00000489728 ZBTB48P10074 688 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-212ENST00000489728 GNAT2P19087 354 aa13.34□□□□□ -0.27
CPSF7-212ENST00000489728 USP5P45974 858 aa13.34□□□□□ -0.27
CPSF7-212ENST00000489728 MAP3K9P80192 1104 aa13.34□□□□□ -0.27
CPSF7-212ENST00000489728 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
CPSF7-212ENST00000489728 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
CPSF7-212ENST00000489728 MOB2Q70IA6 237 aa13.34□□□□□ -0.27
CPSF7-212ENST00000489728 METTL16Q86W50 562 aaKnown RBP13.34□□□□□ -0.27
CPSF7-212ENST00000489728 RASAL3Q86YV0 1011 aa13.34□□□□□ -0.27
CPSF7-212ENST00000489728 CSADQ9Y600 493 aa13.34□□□□□ -0.27
CPSF7-212ENST00000489728 MYH1P12882 1939 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 MBD4O95243 580 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 PRKG1Q13976 671 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 NOL9Q5SY16 702 aaKnown RBP13.33□□□□□ -0.28
CPSF7-212ENST00000489728 GIMAP6Q6P9H5 292 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 TTC6Q86TZ1 520 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 FOXP4Q8IVH2 680 aaPredicted RBP13.33□□□□□ -0.28
CPSF7-212ENST00000489728 MAPKAPK5Q8IW41 473 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 LCORLQ8N3X6 602 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 SLC10A4Q96EP9 437 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 DDRGK1Q96HY6 314 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 WRNIP1Q96S55 665 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 EHD4Q9H223 541 aa13.33□□□□□ -0.28
CPSF7-212ENST00000489728 SIPA1L1O43166 1804 aa13.32□□□□□ -0.28
CPSF7-212ENST00000489728 HIP1O00291 1037 aa13.32□□□□□ -0.28
CPSF7-212ENST00000489728 PDE4AP27815 886 aa13.32□□□□□ -0.28
CPSF7-212ENST00000489728 MAP2K1Q02750 393 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-212ENST00000489728 VGLL4Q14135 290 aa13.32□□□□□ -0.28
CPSF7-212ENST00000489728 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.32□□□□□ -0.28
CPSF7-212ENST00000489728 PUS7LQ9H0K6 701 aaKnown RBP13.32□□□□□ -0.28
CPSF7-212ENST00000489728 ARMT1Q9H993 441 aa13.32□□□□□ -0.28
CPSF7-212ENST00000489728 DOCK1Q14185 1865 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 SPDYE5A6NIY4 337 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 PHF20L1A8MW92 1017 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 TRIM6-TRIM34B2RNG4 842 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 TTC22Q5TAA0 569 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 SPRYD7Q5W111 196 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 MIGA2Q7L4E1 593 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 ERO1BQ86YB8 467 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 OSBP2Q969R2 916 aa13.31□□□□□ -0.28
CPSF7-212ENST00000489728 STRBPQ96SI9 672 aaKnown RBP13.31□□□□□ -0.28
CPSF7-212ENST00000489728 DCP1AQ9NPI6 582 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms