RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 GNL2Q13823 731 aaKnown RBP22.39■■□□□ 1.17
HMG20B-213ENST00000488973 CCDC57Q2TAC2 916 aa22.39■■□□□ 1.17
HMG20B-213ENST00000488973 AIFM3Q96NN9 605 aa22.39■■□□□ 1.17
HMG20B-213ENST00000488973 ERICH4A6NGS2 130 aa22.38■■□□□ 1.17
HMG20B-213ENST00000488973 CSB-PGBD3P0DP91 1061 aa22.38■■□□□ 1.17
HMG20B-213ENST00000488973 ZAP70P43403 619 aa22.38■■□□□ 1.17
HMG20B-213ENST00000488973 LONRF3Q496Y0 759 aa22.38■■□□□ 1.17
HMG20B-213ENST00000488973 CNNM3Q8NE01 707 aa22.38■■□□□ 1.17
HMG20B-213ENST00000488973 KCNH3Q9ULD8 1083 aa22.38■■□□□ 1.17
HMG20B-213ENST00000488973 MAP3K15Q6ZN16 1313 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 SH2B2O14492 632 aaPredicted RBP22.37■■□□□ 1.17
HMG20B-213ENST00000488973 STX10O60499 249 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 MAP3K9P80192 1104 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 SCARF1Q14162 830 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 CHRNA2Q15822 529 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 TEX35Q5T0J7 233 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 FOXP4Q8IVH2 680 aaPredicted RBP22.37■■□□□ 1.17
HMG20B-213ENST00000488973 ZNF622Q969S3 477 aaKnown RBP eCLIP22.37■■□□□ 1.173e-9■□□□□ 9.9
HMG20B-213ENST00000488973 BAG1Q99933 345 aaPredicted RBP22.37■■□□□ 1.17
HMG20B-213ENST00000488973 UBXN6Q9BZV1 441 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 INTS13Q9NVM9 706 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 PCDHA5Q9Y5H7 936 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 GPR161Q8N6U8 529 aaKnown RBP22.37■■□□□ 1.17
HMG20B-213ENST00000488973 NBPF3Q9H094 633 aa22.37■■□□□ 1.17
HMG20B-213ENST00000488973 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.37■■□□□ 1.17
HMG20B-213ENST00000488973 HOOK1Q9UJC3 728 aaKnown RBP22.37■■□□□ 1.17
HMG20B-213ENST00000488973 CASQ1P31415 396 aa22.36■■□□□ 1.17
HMG20B-213ENST00000488973 CLIC6Q96NY7 704 aa22.36■■□□□ 1.17
HMG20B-213ENST00000488973 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.36■■□□□ 1.174e-11■■□□□ 14.4
HMG20B-213ENST00000488973 GOLGA8FQ08AF8 430 aa22.36■■□□□ 1.17
HMG20B-213ENST00000488973 GOLGA8DPQ0D2H9 430 aa22.36■■□□□ 1.17
HMG20B-213ENST00000488973 HSP90AB3PQ58FF7 597 aa22.36■■□□□ 1.17
HMG20B-213ENST00000488973 APOA5Q6Q788 366 aa22.36■■□□□ 1.17
HMG20B-213ENST00000488973 ZBTB3Q9H5J0 574 aa22.36■■□□□ 1.17
HMG20B-213ENST00000488973 TRIM29Q14134 588 aa22.35■■□□□ 1.17
HMG20B-213ENST00000488973 SAMD1Q6SPF0 538 aaPredicted RBP22.35■■□□□ 1.17
HMG20B-213ENST00000488973 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.35■■□□□ 1.17
HMG20B-213ENST00000488973 ATRNO75882 1429 aa22.35■■□□□ 1.17
HMG20B-213ENST00000488973 BMP6P22004 513 aa22.35■■□□□ 1.17
HMG20B-213ENST00000488973 MDM2Q00987 491 aaPredicted RBP22.35■■□□□ 1.17
HMG20B-213ENST00000488973 CYB5R4Q7L1T6 521 aa22.35■■□□□ 1.17
HMG20B-213ENST00000488973 TMEM87BQ96K49 555 aa22.35■■□□□ 1.17
HMG20B-213ENST00000488973 MRFAP1Q9Y605 127 aa22.35■■□□□ 1.17
HMG20B-213ENST00000488973 CHD4Q14839 1912 aa22.34■■□□□ 1.17
HMG20B-213ENST00000488973 CDC27P30260 824 aa22.34■■□□□ 1.17
HMG20B-213ENST00000488973 PDE4BQ07343 736 aa22.34■■□□□ 1.17
HMG20B-213ENST00000488973 NTRK3Q16288 839 aa22.34■■□□□ 1.17
HMG20B-213ENST00000488973 MYO5AQ9Y4I1 1855 aaKnown RBP22.34■■□□□ 1.17
HMG20B-213ENST00000488973 IARSP41252 1262 aaKnown RBP22.33■■□□□ 1.17
HMG20B-213ENST00000488973 GNG11P61952 73 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 SPECC1LQ69YQ0 1117 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 KRI1Q8N9T8 703 aaKnown RBP22.33■■□□□ 1.17
HMG20B-213ENST00000488973 PHKBQ93100 1093 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 A1BGP04217 495 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 ZNF18P17022 549 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 CC2D1AQ6P1N0 951 aaPredicted RBP22.33■■□□□ 1.17
HMG20B-213ENST00000488973 RSRC2Q7L4I2 434 aaKnown RBP22.33■■□□□ 1.17
HMG20B-213ENST00000488973 TBC1D10CQ8IV04 446 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 TC2NQ8N9U0 490 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 ISCA1Q9BUE6 129 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 DACH1Q9UI36 760 aa22.33■■□□□ 1.17
HMG20B-213ENST00000488973 ZBTB43O43298 467 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 ADD2P35612 726 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 NT5DC1Q5TFE4 455 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 WDR24Q96S15 920 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 FEZ2Q9UHY8 353 aaPredicted RBP22.32■■□□□ 1.16
HMG20B-213ENST00000488973 PAPPAQ13219 1627 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 STK36Q9NRP7 1315 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 SEC31AO94979 1220 aaKnown RBP22.32■■□□□ 1.16
HMG20B-213ENST00000488973 TBC1D8O95759 1140 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 PPP2R3AQ06190 1150 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 FAM177A1Q8N128 213 aaPredicted RBP22.32■■□□□ 1.16
HMG20B-213ENST00000488973 MLKLQ8NB16 471 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 ENOX1Q8TC92 643 aaKnown RBP22.32■■□□□ 1.16
HMG20B-213ENST00000488973 KCPQ6ZWJ8 1503 aa22.32■■□□□ 1.16
HMG20B-213ENST00000488973 APPP05067 770 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 RXRAP19793 462 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 SGMS1Q86VZ5 419 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 RABGGTAQ92696 567 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 MAN1B1Q9UKM7 699 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 DENND2AQ9ULE3 1009 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 PTPN21Q16825 1174 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 MICU3Q86XE3 530 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 PDILTQ8N807 584 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 KIFC2Q96AC6 838 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 PRDM11Q9NQV5 511 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 UBN2Q6ZU65 1347 aa22.31■■□□□ 1.16
HMG20B-213ENST00000488973 POSTNQ15063 836 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 PI16Q6UXB8 463 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 IGDCC4Q8TDY8 1250 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 NFE2L3Q9Y4A8 694 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 RANBP6O60518 1105 aaKnown RBP22.3■■□□□ 1.16
HMG20B-213ENST00000488973 SASH3O75995 380 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 TOGARAM2Q6ZUX3 1019 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 TRIML1Q8N9V2 468 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 NKX2-3Q8TAU0 364 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 ZNF512BQ96KM6 892 aaPredicted RBP22.3■■□□□ 1.16
HMG20B-213ENST00000488973 PLA2G12BQ9BX93 195 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 WDR17Q8IZU2 1322 aa22.3■■□□□ 1.16
HMG20B-213ENST00000488973 NHSL1Q5SYE7 1610 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms