RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 TAOK2Q9UL54 1235 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 MRFAP1Q9Y605 127 aa16.31■□□□□ 0.2
RER1-207ENST00000488353 AHDC1Q5TGY3 1603 aaPredicted RBP16.31■□□□□ 0.2
RER1-207ENST00000488353 UBASH3AP57075 661 aa16.3■□□□□ 0.2
RER1-207ENST00000488353 BRD3Q15059 726 aa16.3■□□□□ 0.2
RER1-207ENST00000488353 AGXT2Q9BYV1 514 aa16.3■□□□□ 0.2
RER1-207ENST00000488353 PPP2R2CQ9Y2T4 447 aa16.3■□□□□ 0.2
RER1-207ENST00000488353 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.3■□□□□ 0.2
RER1-207ENST00000488353 MAP2K7O14733 419 aa16.3■□□□□ 0.2
RER1-207ENST00000488353 PCCAP05165 728 aaPredicted RBP16.3■□□□□ 0.2
RER1-207ENST00000488353 FDPSP14324 419 aaKnown RBP16.3■□□□□ 0.2
RER1-207ENST00000488353 ADORA1P30542 326 aa16.3■□□□□ 0.2
RER1-207ENST00000488353 ZBTB38Q8NAP3 1195 aaPredicted RBP16.3■□□□□ 0.2
RER1-207ENST00000488353 GOLGA1Q92805 767 aa16.3■□□□□ 0.2
RER1-207ENST00000488353 ZFP91Q96JP5 570 aaPredicted RBP16.3■□□□□ 0.2
RER1-207ENST00000488353 POLR3DP05423 398 aaPredicted RBP16.29■□□□□ 0.2
RER1-207ENST00000488353 TXLNAP40222 546 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 GNG11P61952 73 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 TRIM28Q13263 835 aaKnown RBP16.29■□□□□ 0.2
RER1-207ENST00000488353 SF3A1Q15459 793 aaKnown RBP16.29■□□□□ 0.2
RER1-207ENST00000488353 FAM177A1Q8N128 213 aaPredicted RBP16.29■□□□□ 0.2
RER1-207ENST00000488353 RGS22Q8NE09 1264 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 GPR108Q9NPR9 543 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 BIN1O00499 593 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 NLRP10Q86W26 655 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 ZNF274Q96GC6 653 aaPredicted RBP16.29■□□□□ 0.2
RER1-207ENST00000488353 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
RER1-207ENST00000488353 SALL1Q9NSC2 1324 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 H3BQF6 201 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 SERPINC1P01008 464 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 KCNG4Q8TDN1 519 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 BRMS1Q9HCU9 246 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 COL22A1Q8NFW1 1626 aaPredicted RBP16.28■□□□□ 0.2
RER1-207ENST00000488353 NEDD4P46934 1319 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 RPS6KA5O75582 802 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
RER1-207ENST00000488353 ATP1A3P13637 1013 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 MAGEA9P43362 315 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 DDB1Q16531 1140 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 CFAP100Q494V2 611 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 VSTM4Q8IW00 320 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 LINC00301Q8NCQ3 95 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 WDR24Q96S15 920 aa16.28■□□□□ 0.2
RER1-207ENST00000488353 SPATA31A1Q5TZJ5 1347 aa16.27■□□□□ 0.2
RER1-207ENST00000488353 CIAO1O76071 339 aa16.27■□□□□ 0.2
RER1-207ENST00000488353 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.2
RER1-207ENST00000488353 STK38Q15208 465 aa16.27■□□□□ 0.2
RER1-207ENST00000488353 PI16Q6UXB8 463 aa16.27■□□□□ 0.2
RER1-207ENST00000488353 HNRNPLLQ8WVV9 542 aaKnown RBP16.27■□□□□ 0.2
RER1-207ENST00000488353 CHMP4CQ96CF2 233 aa16.27■□□□□ 0.2
RER1-207ENST00000488353 HSD3B7Q9H2F3 369 aa16.27■□□□□ 0.2
RER1-207ENST00000488353 CLIC4Q9Y696 253 aa16.27■□□□□ 0.2
RER1-207ENST00000488353 ZNF202O95125 648 aa16.27■□□□□ 0.19
RER1-207ENST00000488353 SCARF1Q14162 830 aa16.27■□□□□ 0.19
RER1-207ENST00000488353 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.19
RER1-207ENST00000488353 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.19
RER1-207ENST00000488353 DZIP3Q86Y13 1208 aaKnown RBP16.26■□□□□ 0.19
RER1-207ENST00000488353 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 GREM2Q9H772 168 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 VPS18Q9P253 973 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 DOT1LQ8TEK3 1739 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 KLF18A0A0U1RQI7 1052 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 FOXP2O15409 715 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 PRC1O43663 620 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 MYO1BO43795 1136 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 YEATS4O95619 227 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 FGAP02671 866 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 TTC31Q49AM3 519 aaPredicted RBP16.26■□□□□ 0.19
RER1-207ENST00000488353 HDXQ7Z353 690 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 TMEM139Q8IV31 216 aa16.26■□□□□ 0.19
RER1-207ENST00000488353 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
RER1-207ENST00000488353 EIF3JO75822 258 aaKnown RBP16.25■□□□□ 0.19
RER1-207ENST00000488353 CSF1RP07333 972 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 ZAP70P43403 619 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 MYL5Q02045 173 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 IMMTQ16891 758 aaKnown RBP16.25■□□□□ 0.19
RER1-207ENST00000488353 MARCH10Q8NA82 808 aaPredicted RBP16.25■□□□□ 0.19
RER1-207ENST00000488353 DPF2Q92785 391 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 C8orf76Q96K31 380 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 PUS7LQ9H0K6 701 aaKnown RBP16.25■□□□□ 0.19
RER1-207ENST00000488353 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 MKRN1Q9UHC7 482 aaKnown RBP16.25■□□□□ 0.19
RER1-207ENST00000488353 JRKLQ9Y4A0 524 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 LRP6O75581 1613 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 GOLGA8BA8MQT2 603 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 SPTLC2O15270 562 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 STX10O60499 249 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 ITGA6P23229 1130 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 KIFC2Q96AC6 838 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 ZBTB9Q96C00 473 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 BAG1Q99933 345 aaPredicted RBP16.25■□□□□ 0.19
RER1-207ENST00000488353 PLA2G12BQ9BX93 195 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 PDE11AQ9HCR9 933 aa16.25■□□□□ 0.19
RER1-207ENST00000488353 LTBP4Q8N2S1 1624 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms