RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 IL27Q8NEV9 243 aa8.18□□□□□ -1.1
PDAP1-203ENST00000488214 RNF41Q9H4P4 317 aaPredicted RBP8.18□□□□□ -1.1
PDAP1-203ENST00000488214 ATP8A2Q9NTI2 1148 aa8.18□□□□□ -1.1
PDAP1-203ENST00000488214 MYH15Q9Y2K3 1946 aa8.18□□□□□ -1.1
PDAP1-203ENST00000488214 FLT1P17948 1338 aa8.18□□□□□ -1.1
PDAP1-203ENST00000488214 MYO3BQ8WXR4 1341 aa8.18□□□□□ -1.1
PDAP1-203ENST00000488214 ROBO3Q96MS0 1386 aa8.18□□□□□ -1.1
PDAP1-203ENST00000488214 USP17L12C9JPN9 530 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 USP17L21D6R901 530 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 PSMD14O00487 310 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 MCM5P33992 734 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 ANTXR2P58335 489 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 PPP4CP60510 307 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 PICALMQ13492 652 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 TOB2Q14106 344 aaPredicted RBP8.17□□□□□ -1.1
PDAP1-203ENST00000488214 AKNAD1Q5T1N1 836 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 GIMAP6Q6P9H5 292 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 RSBN1LQ6PCB5 846 aaPredicted RBP8.17□□□□□ -1.1
PDAP1-203ENST00000488214 CTR9Q6PD62 1173 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 MFSD6Q6ZSS7 791 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 DHX32Q7L7V1 743 aaKnown RBP8.17□□□□□ -1.1
PDAP1-203ENST00000488214 CCDC83Q8IWF9 413 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 TGFBRAP1Q8WUH2 860 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 STAG1Q8WVM7 1258 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 JDP2Q8WYK2 163 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 BRF1Q92994 677 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 KRT23Q9C075 422 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 VPS33BQ9H267 617 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 CNNM2Q9H8M5 875 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 MCM9Q9NXL9 1143 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
PDAP1-203ENST00000488214 TPCN1Q9ULQ1 816 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 ZNRF3Q9ULT6 936 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 NAP1L2Q9ULW6 460 aaPredicted RBP8.17□□□□□ -1.1
PDAP1-203ENST00000488214 LIMCH1Q9UPQ0 1083 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 LTBP3Q9NS15 1303 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 GOLGB1Q14789 3259 aaKnown RBP8.17□□□□□ -1.1
PDAP1-203ENST00000488214 ATAD5Q96QE3 1844 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 MYH4Q9Y623 1939 aa8.17□□□□□ -1.1
PDAP1-203ENST00000488214 SMIM22K7EJ46 135 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 KDM4AO75164 1064 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 SLC3A2P08195 630 aaKnown RBP8.16□□□□□ -1.1
PDAP1-203ENST00000488214 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 RHBDL3P58872 404 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 EXOSC10Q01780 885 aaKnown RBP8.16□□□□□ -1.1
PDAP1-203ENST00000488214 EVX2Q03828 476 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 APOBRQ0VD83 1088 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 STK3Q13188 491 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 CUL4AQ13619 759 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 HHIPL2Q6UWX4 724 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 CYB5R4Q7L1T6 521 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 WDR19Q8NEZ3 1342 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 FAM163AQ96GL9 167 aaPredicted RBP8.16□□□□□ -1.1
PDAP1-203ENST00000488214 ZSCAN31Q96LW9 406 aaPredicted RBP8.16□□□□□ -1.1
PDAP1-203ENST00000488214 GREB1LQ9C091 1923 aaPredicted RBP8.16□□□□□ -1.1
PDAP1-203ENST00000488214 ALDH8A1Q9H2A2 487 aaPredicted RBP8.16□□□□□ -1.1
PDAP1-203ENST00000488214 INCENPQ9NQS7 918 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 SH2B1Q9NRF2 756 aaPredicted RBP8.16□□□□□ -1.1
PDAP1-203ENST00000488214 ANAPC4Q9UJX5 808 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 PCDHAC2Q9Y5I4 1007 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
PDAP1-203ENST00000488214 GOLGA8BA8MQT2 603 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 SH2B2O14492 632 aaPredicted RBP8.15□□□□□ -1.1
PDAP1-203ENST00000488214 PRDM1O75626 825 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 POLR3DP05423 398 aaPredicted RBP8.15□□□□□ -1.1
PDAP1-203ENST00000488214 ST3GAL1Q11201 340 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 ME3Q16798 604 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 CFAP100Q494V2 611 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 SBK1Q52WX2 424 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 CIAPIN1Q6FI81 312 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 CDC42EP5Q6NZY7 148 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 NECAB1Q8N987 351 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 NKX2-3Q8TAU0 364 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 ESR2Q92731 530 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 ZDHHC15Q96MV8 337 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 GPHNQ9NQX3 736 aaPredicted RBP8.15□□□□□ -1.1
PDAP1-203ENST00000488214 USP40Q9NVE5 1235 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 SERPINA10Q9UK55 444 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 HDAC9Q9UKV0 1011 aa8.15□□□□□ -1.1
PDAP1-203ENST00000488214 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.1
PDAP1-203ENST00000488214 ZNF541Q9H0D2 1346 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 KLF18A0A0U1RQI7 1052 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 IFIT3O14879 490 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 RANBP6O60518 1105 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 WDHD1O75717 1129 aaPredicted RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 VIL1P09327 827 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 PRELPP51888 382 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 CACNB3P54284 484 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 EIF6P56537 245 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 CXCL9Q07325 125 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 PDE4BQ07343 736 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 SART3Q15020 963 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 TMEM67Q5HYA8 995 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 C12orf60Q5U649 245 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 APOBEC3HQ6NTF7 200 aaKnown RBP8.14□□□□□ -1.11
PDAP1-203ENST00000488214 NFXL1Q6ZNB6 911 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 ARHGAP27Q6ZUM4 889 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 RAB11FIP4Q86YS3 637 aa8.14□□□□□ -1.11
PDAP1-203ENST00000488214 GTF3C6Q969F1 213 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms