RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 DLK2Q6UY11 383 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 ZFPM1Q8IX07 1006 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 FAM227BQ96M60 508 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 TMEM39BQ9GZU3 492 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 OSBPL5Q9H0X9 879 aaPredicted RBP23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 DIAPH3Q9NSV4 1193 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 MKRN1Q9UHC7 482 aaKnown RBP23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 COL2A1P02458 1487 aaPredicted RBP23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 FLT1P17948 1338 aa23.28■■□□□ 1.32
PCOLCE-208ENST00000487172 ATRNL1Q5VV63 1379 aa23.27■■□□□ 1.32
PCOLCE-208ENST00000487172 CHMLP26374 656 aa23.27■■□□□ 1.32
PCOLCE-208ENST00000487172 SUPT20HL1Q3ZLR7 823 aa23.27■■□□□ 1.32
PCOLCE-208ENST00000487172 ATP8A2Q9NTI2 1148 aa23.27■■□□□ 1.32
PCOLCE-208ENST00000487172 TRPM7Q96QT4 1865 aa23.26■■□□□ 1.31
PCOLCE-208ENST00000487172 FMR1Q06787 632 aaKnown RBP eCLIP23.26■■□□□ 1.31
PCOLCE-208ENST00000487172 PRAMEF18Q5VWM3 479 aa23.26■■□□□ 1.31
PCOLCE-208ENST00000487172 MAPKAPK5Q8IW41 473 aa23.26■■□□□ 1.31
PCOLCE-208ENST00000487172 DHX36Q9H2U1 1008 aaKnown RBP23.26■■□□□ 1.31
PCOLCE-208ENST00000487172 SLC4A4Q9Y6R1 1079 aa23.26■■□□□ 1.31
PCOLCE-208ENST00000487172 PRKAB2O43741 272 aa23.25■■□□□ 1.31
PCOLCE-208ENST00000487172 NBPF12Q5TAG4 269 aaPredicted RBP23.25■■□□□ 1.31
PCOLCE-208ENST00000487172 GIMAP6Q6P9H5 292 aa23.25■■□□□ 1.31
PCOLCE-208ENST00000487172 CWC27Q6UX04 472 aaKnown RBP23.25■■□□□ 1.31
PCOLCE-208ENST00000487172 SH3BP5LQ7L8J4 393 aa23.25■■□□□ 1.31
PCOLCE-208ENST00000487172 SDR42E1Q8WUS8 393 aa23.25■■□□□ 1.31
PCOLCE-208ENST00000487172 HOOK2Q96ED9 719 aa23.25■■□□□ 1.31
PCOLCE-208ENST00000487172 DCP1AQ9NPI6 582 aaPredicted RBP23.25■■□□□ 1.31
PCOLCE-208ENST00000487172 PATL2C9JE40 543 aaKnown RBP23.24■■□□□ 1.31
PCOLCE-208ENST00000487172 NF2P35240 595 aa23.24■■□□□ 1.31
PCOLCE-208ENST00000487172 RUFY2Q8WXA3 655 aa23.24■■□□□ 1.31
PCOLCE-208ENST00000487172 DDTLA6NHG4 134 aaPredicted RBP23.23■■□□□ 1.31
PCOLCE-208ENST00000487172 GSG1L2A8MUP6 293 aa23.23■■□□□ 1.31
PCOLCE-208ENST00000487172 MFAP1P55081 439 aaKnown RBP23.23■■□□□ 1.31
PCOLCE-208ENST00000487172 C1QTNF8P60827 252 aa23.23■■□□□ 1.31
PCOLCE-208ENST00000487172 CST9Q5W186 159 aa23.23■■□□□ 1.31
PCOLCE-208ENST00000487172 CDAN1Q8IWY9 1227 aa23.23■■□□□ 1.31
PCOLCE-208ENST00000487172 MYH1P12882 1939 aa23.23■■□□□ 1.31
PCOLCE-208ENST00000487172 CELF2O95319 508 aaKnown RBP23.22■■□□□ 1.31
PCOLCE-208ENST00000487172 FKBP1BP68106 108 aa23.22■■□□□ 1.31
PCOLCE-208ENST00000487172 MAP3K10Q02779 954 aa23.22■■□□□ 1.31
PCOLCE-208ENST00000487172 CCDC129Q6ZRS4 1044 aa23.22■■□□□ 1.31
PCOLCE-208ENST00000487172 ZSCAN29Q8IWY8 852 aaPredicted RBP23.22■■□□□ 1.31
PCOLCE-208ENST00000487172 DDRGK1Q96HY6 314 aa23.22■■□□□ 1.31
PCOLCE-208ENST00000487172 CCDC171Q6TFL3 1326 aa23.22■■□□□ 1.31
PCOLCE-208ENST00000487172 RAD50Q92878 1312 aa23.22■■□□□ 1.31
PCOLCE-208ENST00000487172 ZNF589Q86UQ0 364 aaPredicted RBP23.21■■□□□ 1.31
PCOLCE-208ENST00000487172 CSRNP1Q96S65 589 aa23.21■■□□□ 1.31
PCOLCE-208ENST00000487172 PI4KBQ9UBF8 816 aa23.21■■□□□ 1.31
PCOLCE-208ENST00000487172 SSC5DA1L4H1 1573 aa23.21■■□□□ 1.31
PCOLCE-208ENST00000487172 NAV1Q8NEY1 1877 aa23.21■■□□□ 1.31
PCOLCE-208ENST00000487172 DDX60LQ5H9U9 1706 aaKnown RBP23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 TBC1D12O60347 775 aa23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 CDC45O75419 566 aa23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 APLP1P51693 650 aa23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 TTC6Q86TZ1 520 aa23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 FOXP4Q8IVH2 680 aaPredicted RBP23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 IFNL3Q8IZI9 196 aa23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 GBA2Q9HCG7 927 aaPredicted RBP23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 MCM9Q9NXL9 1143 aa23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 PALD1Q9ULE6 856 aa23.2■■□□□ 1.3
PCOLCE-208ENST00000487172 TMEM88BA6NKF7 163 aa23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 FOXP2O15409 715 aa23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 SGSM2O43147 1006 aa23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 PPP1R12BO60237 982 aaPredicted RBP23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 ALX1Q15699 326 aa23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 MAP3K11Q16584 847 aa23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 DCAF15Q66K64 600 aa23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 METTL16Q86W50 562 aaKnown RBP23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 NACAP1Q9BZK3 213 aa23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 ZNF408Q9H9D4 720 aa23.19■■□□□ 1.3
PCOLCE-208ENST00000487172 USP2O75604 605 aaPredicted RBP23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 POLR3DP05423 398 aaPredicted RBP23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 HLA-DOAP06340 250 aa23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 HSPD1P10809 573 aaKnown RBP23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 SBK1Q52WX2 424 aa23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 C2orf69Q8N8R5 385 aa23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 EHD4Q9H223 541 aa23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 EPB41L4AQ9HCS5 686 aaPredicted RBP23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 SAP30BPQ9UHR5 308 aaKnown RBP23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 TAOK2Q9UL54 1235 aa23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 PAPPA2Q9BXP8 1791 aa23.18■■□□□ 1.3
PCOLCE-208ENST00000487172 USP17L12C9JPN9 530 aa23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 USP17L21D6R901 530 aa23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 APPP05067 770 aa23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 VPS53Q5VIR6 699 aa23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 CASC1Q6TDU7 716 aa23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 ARMC9Q7Z3E5 817 aa23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 IL25Q9H293 177 aa23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 ARPP21Q9UBL0 812 aaPredicted RBP23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 HERC5Q9UII4 1024 aaKnown RBP23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 BAZ2AQ9UIF9 1905 aaKnown RBP23.17■■□□□ 1.3
PCOLCE-208ENST00000487172 UNCXA6NJT0 531 aa23.16■■□□□ 1.3
PCOLCE-208ENST00000487172 C12orf60Q5U649 245 aa23.16■■□□□ 1.3
PCOLCE-208ENST00000487172 CTR9Q6PD62 1173 aa23.16■■□□□ 1.3
PCOLCE-208ENST00000487172 AMOTL1Q8IY63 956 aa23.16■■□□□ 1.3
PCOLCE-208ENST00000487172 ESYT1Q9BSJ8 1104 aa23.16■■□□□ 1.3
PCOLCE-208ENST00000487172 DSCC1Q9BVC3 393 aa23.16■■□□□ 1.3
PCOLCE-208ENST00000487172 ZNF341Q9BYN7 854 aa23.16■■□□□ 1.3
PCOLCE-208ENST00000487172 CREBZFQ9NS37 354 aa23.16■■□□□ 1.3
PCOLCE-208ENST00000487172 SIPA1L1O43166 1804 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms