RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 C9orf50Q5SZB4 431 aa19.42■□□□□ 0.7
U2AF1-211ENST00000486519 SMCR8Q8TEV9 937 aaPredicted RBP19.42■□□□□ 0.7
U2AF1-211ENST00000486519 SYMPKQ92797 1274 aaKnown RBP19.42■□□□□ 0.7
U2AF1-211ENST00000486519 FAM122AQ96E09 287 aa19.42■□□□□ 0.7
U2AF1-211ENST00000486519 HOOK2Q96ED9 719 aa19.42■□□□□ 0.7
U2AF1-211ENST00000486519 PUS3Q9BZE2 481 aaKnown RBP19.42■□□□□ 0.7
U2AF1-211ENST00000486519 ATRNL1Q5VV63 1379 aa19.42■□□□□ 0.7
U2AF1-211ENST00000486519 PHF20L1A8MW92 1017 aa19.41■□□□□ 0.7
U2AF1-211ENST00000486519 TREML2Q5T2D2 321 aa19.41■□□□□ 0.7
U2AF1-211ENST00000486519 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
U2AF1-211ENST00000486519 FAM151AQ8WW52 585 aa19.41■□□□□ 0.7
U2AF1-211ENST00000486519 CNNM1Q9NRU3 951 aa19.41■□□□□ 0.7
U2AF1-211ENST00000486519 IFT57Q9NWB7 429 aa19.41■□□□□ 0.7
U2AF1-211ENST00000486519 AFG3L2Q9Y4W6 797 aa19.41■□□□□ 0.7
U2AF1-211ENST00000486519 LOC285556D6RIA3 1793 aa19.4■□□□□ 0.7
U2AF1-211ENST00000486519 PTPRAP18433 802 aa19.4■□□□□ 0.7
U2AF1-211ENST00000486519 SHHQ15465 462 aa19.4■□□□□ 0.7
U2AF1-211ENST00000486519 LMBR1LQ6UX01 489 aa19.4■□□□□ 0.7
U2AF1-211ENST00000486519 FBXO33Q7Z6M2 555 aa19.4■□□□□ 0.7
U2AF1-211ENST00000486519 FAM198AQ9UFP1 575 aa19.4■□□□□ 0.7
U2AF1-211ENST00000486519 MYH13Q9UKX3 1938 aa19.4■□□□□ 0.7
U2AF1-211ENST00000486519 PEX10O60683 326 aa19.39■□□□□ 0.69
U2AF1-211ENST00000486519 FOSL2P15408 326 aa19.39■□□□□ 0.69
U2AF1-211ENST00000486519 UBE4AQ14139 1066 aa19.39■□□□□ 0.69
U2AF1-211ENST00000486519 TJAP1Q5JTD0 557 aa19.39■□□□□ 0.69
U2AF1-211ENST00000486519 MAP3K21Q5TCX8 1036 aa19.39■□□□□ 0.69
U2AF1-211ENST00000486519 FASTKD5Q7L8L6 764 aaKnown RBP19.39■□□□□ 0.69
U2AF1-211ENST00000486519 SLC45A1Q9Y2W3 748 aa19.39■□□□□ 0.69
U2AF1-211ENST00000486519 PRKAR2AP13861 404 aaKnown RBP19.38■□□□□ 0.69
U2AF1-211ENST00000486519 TRIM75PA6NK02 468 aa19.37■□□□□ 0.69
U2AF1-211ENST00000486519 CCND3P30281 292 aaPredicted RBP19.37■□□□□ 0.69
U2AF1-211ENST00000486519 FAM110CQ1W6H9 321 aa19.37■□□□□ 0.69
U2AF1-211ENST00000486519 LHX8Q68G74 356 aa19.37■□□□□ 0.69
U2AF1-211ENST00000486519 CDC42EP5Q6NZY7 148 aa19.37■□□□□ 0.69
U2AF1-211ENST00000486519 SCYL3Q8IZE3 742 aa19.37■□□□□ 0.69
U2AF1-211ENST00000486519 CYP2B6P20813 491 aa19.36■□□□□ 0.69
U2AF1-211ENST00000486519 GNAI1P63096 354 aa19.36■□□□□ 0.69
U2AF1-211ENST00000486519 MAP3K12Q12852 859 aa19.36■□□□□ 0.69
U2AF1-211ENST00000486519 ADAMTS8Q9UP79 889 aa19.36■□□□□ 0.69
U2AF1-211ENST00000486519 TAF7LQ5H9L4 462 aa19.35■□□□□ 0.69
U2AF1-211ENST00000486519 HHIPL2Q6UWX4 724 aa19.35■□□□□ 0.69
U2AF1-211ENST00000486519 LINS1Q8NG48 757 aa19.35■□□□□ 0.69
U2AF1-211ENST00000486519 DNAAF4Q8WXU2 420 aa19.35■□□□□ 0.69
U2AF1-211ENST00000486519 LBHD1Q9BQE6 289 aaPredicted RBP19.35■□□□□ 0.69
U2AF1-211ENST00000486519 MRIQ9BWK5 157 aa19.35■□□□□ 0.69
U2AF1-211ENST00000486519 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
U2AF1-211ENST00000486519 AGTPBP1Q9UPW5 1226 aa19.35■□□□□ 0.69
U2AF1-211ENST00000486519 DAGLAQ9Y4D2 1042 aa19.35■□□□□ 0.69
U2AF1-211ENST00000486519 SLC4A2P04920 1241 aa19.34■□□□□ 0.69
U2AF1-211ENST00000486519 CACNB2Q08289 660 aaPredicted RBP19.34■□□□□ 0.69
U2AF1-211ENST00000486519 DIXDC1Q155Q3 683 aa19.34■□□□□ 0.69
U2AF1-211ENST00000486519 CCDC57Q2TAC2 916 aa19.34■□□□□ 0.69
U2AF1-211ENST00000486519 SH3BP5LQ7L8J4 393 aa19.34■□□□□ 0.69
U2AF1-211ENST00000486519 TBC1D22AQ8WUA7 517 aa19.34■□□□□ 0.69
U2AF1-211ENST00000486519 TSR2Q969E8 191 aaKnown RBP19.34■□□□□ 0.69
U2AF1-211ENST00000486519 ATAD5Q96QE3 1844 aa19.34■□□□□ 0.69
U2AF1-211ENST00000486519 RLFQ13129 1914 aa19.33■□□□□ 0.69
U2AF1-211ENST00000486519 ATN1P54259 1190 aaPredicted RBP19.33■□□□□ 0.68
U2AF1-211ENST00000486519 PICK1Q9NRD5 415 aa19.33■□□□□ 0.68
U2AF1-211ENST00000486519 FLIIQ13045 1269 aa19.32■□□□□ 0.68
U2AF1-211ENST00000486519 CCL14Q16627 93 aa19.32■□□□□ 0.68
U2AF1-211ENST00000486519 STK31Q9BXU1 1019 aa19.32■□□□□ 0.68
U2AF1-211ENST00000486519 FRAT2O75474 233 aaPredicted RBP19.31■□□□□ 0.68
U2AF1-211ENST00000486519 VPS37DQ86XT2 251 aa19.31■□□□□ 0.68
U2AF1-211ENST00000486519 SENP6Q9GZR1 1112 aaPredicted RBP19.31■□□□□ 0.68
U2AF1-211ENST00000486519 F6X3S4 739 aa19.3■□□□□ 0.68
U2AF1-211ENST00000486519 APAF1O14727 1248 aa19.3■□□□□ 0.68
U2AF1-211ENST00000486519 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
U2AF1-211ENST00000486519 GRIN2CQ14957 1233 aa19.3■□□□□ 0.68
U2AF1-211ENST00000486519 TCF20Q9UGU0 1960 aaKnown RBP19.3■□□□□ 0.68
U2AF1-211ENST00000486519 SMAD3P84022 425 aaKnown RBP19.29■□□□□ 0.68
U2AF1-211ENST00000486519 LRRC24Q50LG9 513 aa19.29■□□□□ 0.68
U2AF1-211ENST00000486519 SPINK5Q9NQ38 1064 aaPredicted RBP19.29■□□□□ 0.68
U2AF1-211ENST00000486519 MYH2Q9UKX2 1941 aa19.29■□□□□ 0.68
U2AF1-211ENST00000486519 MAST3O60307 1309 aa19.28■□□□□ 0.68
U2AF1-211ENST00000486519 RTP1P59025 263 aa19.28■□□□□ 0.68
U2AF1-211ENST00000486519 VGLL2Q8N8G2 317 aa19.28■□□□□ 0.68
U2AF1-211ENST00000486519 ASCC2Q9H1I8 757 aaPredicted RBP19.28■□□□□ 0.68
U2AF1-211ENST00000486519 USP40Q9NVE5 1235 aa19.28■□□□□ 0.68
U2AF1-211ENST00000486519 DDTLA6NHG4 134 aaPredicted RBP19.27■□□□□ 0.68
U2AF1-211ENST00000486519 FAM196BA6NMK8 535 aa19.27■□□□□ 0.68
U2AF1-211ENST00000486519 PRDX5P30044 214 aa19.27■□□□□ 0.68
U2AF1-211ENST00000486519 BEND3Q5T5X7 828 aa19.27■□□□□ 0.68
U2AF1-211ENST00000486519 BADQ92934 168 aa19.27■□□□□ 0.68
U2AF1-211ENST00000486519 KAZALD1Q96I82 304 aa19.27■□□□□ 0.68
U2AF1-211ENST00000486519 TXNRD2Q9NNW7 524 aa19.27■□□□□ 0.68
U2AF1-211ENST00000486519 RFX7Q2KHR2 1363 aa19.27■□□□□ 0.68
U2AF1-211ENST00000486519 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
U2AF1-211ENST00000486519 RGS3P49796 1198 aa19.26■□□□□ 0.67
U2AF1-211ENST00000486519 WDR43Q15061 677 aaKnown RBP eCLIP19.26■□□□□ 0.67
U2AF1-211ENST00000486519 ADAMTS19Q8TE59 1207 aa19.26■□□□□ 0.67
U2AF1-211ENST00000486519 PNMA3Q9UL41 463 aa19.26■□□□□ 0.67
U2AF1-211ENST00000486519 SUGT1Q9Y2Z0 365 aa19.26■□□□□ 0.67
U2AF1-211ENST00000486519 ZKSCAN1P17029 563 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-211ENST00000486519 GCLCP48506 637 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-211ENST00000486519 MAP3K10Q02779 954 aa19.25■□□□□ 0.67
U2AF1-211ENST00000486519 TWISTNBQ3B726 338 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-211ENST00000486519 SH3RF1Q7Z6J0 888 aa19.25■□□□□ 0.67
U2AF1-211ENST00000486519 PPM1EQ8WY54 764 aa19.25■□□□□ 0.67
U2AF1-211ENST00000486519 USP6NLQ92738 828 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms