RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 RHBDL3P58872 404 aa22.27■■□□□ 1.16
ATG4B-221ENST00000483778 G3BP1Q13283 466 aaKnown RBP eCLIP22.27■■□□□ 1.16
ATG4B-221ENST00000483778 NOL9Q5SY16 702 aaKnown RBP22.27■■□□□ 1.16
ATG4B-221ENST00000483778 ZKSCAN2Q63HK3 967 aa22.27■■□□□ 1.16
ATG4B-221ENST00000483778 ARMC5Q96C12 935 aa22.27■■□□□ 1.16
ATG4B-221ENST00000483778 C1orf115Q9H7X2 142 aa22.27■■□□□ 1.16
ATG4B-221ENST00000483778 GPR75-ASB3A0A0A6YYF3 556 aa22.26■■□□□ 1.15
ATG4B-221ENST00000483778 MCAMP43121 646 aa22.26■■□□□ 1.15
ATG4B-221ENST00000483778 PICALMQ13492 652 aa22.26■■□□□ 1.15
ATG4B-221ENST00000483778 POLA2Q14181 598 aa22.26■■□□□ 1.15
ATG4B-221ENST00000483778 SPTY2D1Q68D10 685 aaPredicted RBP22.26■■□□□ 1.15
ATG4B-221ENST00000483778 ERICH6Q7L0X2 663 aa22.26■■□□□ 1.15
ATG4B-221ENST00000483778 SPATA5Q8NB90 893 aa22.26■■□□□ 1.15
ATG4B-221ENST00000483778 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.26■■□□□ 1.15
ATG4B-221ENST00000483778 CPA4Q9UI42 421 aa22.26■■□□□ 1.15
ATG4B-221ENST00000483778 MROH7-TTC4A0A0A0MT08 1334 aa22.26■■□□□ 1.15
ATG4B-221ENST00000483778 PDHXO00330 501 aa22.25■■□□□ 1.15
ATG4B-221ENST00000483778 EN2P19622 333 aaPredicted RBP22.25■■□□□ 1.15
ATG4B-221ENST00000483778 MAP3K10Q02779 954 aa22.25■■□□□ 1.15
ATG4B-221ENST00000483778 GORABQ5T7V8 394 aa22.25■■□□□ 1.15
ATG4B-221ENST00000483778 GPAT2Q6NUI2 795 aa22.25■■□□□ 1.15
ATG4B-221ENST00000483778 C17orf99Q6UX52 265 aa22.25■■□□□ 1.15
ATG4B-221ENST00000483778 ZSCAN29Q8IWY8 852 aaPredicted RBP22.25■■□□□ 1.15
ATG4B-221ENST00000483778 ZCCHC17Q9NP64 241 aaKnown RBP22.25■■□□□ 1.15
ATG4B-221ENST00000483778 SNRKQ9NRH2 765 aa22.25■■□□□ 1.15
ATG4B-221ENST00000483778 MGAMO43451 1857 aa22.24■■□□□ 1.15
ATG4B-221ENST00000483778 ARID4AP29374 1257 aaPredicted RBP22.24■■□□□ 1.15
ATG4B-221ENST00000483778 LACTBP83111 547 aaPredicted RBP22.24■■□□□ 1.15
ATG4B-221ENST00000483778 ATP8B2P98198 1209 aa22.24■■□□□ 1.15
ATG4B-221ENST00000483778 ANKRD23Q86SG2 305 aa22.24■■□□□ 1.15
ATG4B-221ENST00000483778 NSUN4Q96CB9 384 aaKnown RBP22.24■■□□□ 1.15
ATG4B-221ENST00000483778 DOCK1Q14185 1865 aa22.24■■□□□ 1.15
ATG4B-221ENST00000483778 CDK5RAP2Q96SN8 1893 aa22.24■■□□□ 1.15
ATG4B-221ENST00000483778 BRCA2P51587 3418 aa22.23■■□□□ 1.15
ATG4B-221ENST00000483778 FAM196BA6NMK8 535 aa22.23■■□□□ 1.15
ATG4B-221ENST00000483778 SLC34A2O95436 690 aa22.23■■□□□ 1.15
ATG4B-221ENST00000483778 CCDC84Q86UT8 332 aaPredicted RBP22.23■■□□□ 1.15
ATG4B-221ENST00000483778 SSH3Q8TE77 659 aa22.23■■□□□ 1.15
ATG4B-221ENST00000483778 ZHX2Q9Y6X8 837 aa22.23■■□□□ 1.15
ATG4B-221ENST00000483778 ADGRA2Q96PE1 1338 aa22.23■■□□□ 1.15
ATG4B-221ENST00000483778 DOCK3Q8IZD9 2030 aa22.23■■□□□ 1.15
ATG4B-221ENST00000483778 MYCP01106 439 aaPredicted RBP22.22■■□□□ 1.15
ATG4B-221ENST00000483778 PTPRAP18433 802 aa22.22■■□□□ 1.15
ATG4B-221ENST00000483778 SLF2Q8IX21 1173 aa22.22■■□□□ 1.15
ATG4B-221ENST00000483778 ZNF333Q96JL9 665 aa22.22■■□□□ 1.15
ATG4B-221ENST00000483778 DBNDD2Q9BQY9 259 aa22.22■■□□□ 1.15
ATG4B-221ENST00000483778 ZBTB7BO15156 539 aaPredicted RBP22.21■■□□□ 1.15
ATG4B-221ENST00000483778 DIEXFQ68CQ4 756 aaKnown RBP22.21■■□□□ 1.15
ATG4B-221ENST00000483778 SCYL3Q8IZE3 742 aa22.21■■□□□ 1.15
ATG4B-221ENST00000483778 SH3TC2Q8TF17 1288 aa22.21■■□□□ 1.15
ATG4B-221ENST00000483778 TRIM47Q96LD4 638 aa22.21■■□□□ 1.15
ATG4B-221ENST00000483778 RAI14Q9P0K7 980 aa22.21■■□□□ 1.15
ATG4B-221ENST00000483778 AFG3L2Q9Y4W6 797 aa22.21■■□□□ 1.15
ATG4B-221ENST00000483778 ATAD5Q96QE3 1844 aa22.2■■□□□ 1.14
ATG4B-221ENST00000483778 CXCL11O14625 94 aa22.2■■□□□ 1.14
ATG4B-221ENST00000483778 CYP2C8P10632 490 aa22.2■■□□□ 1.14
ATG4B-221ENST00000483778 RRP1BQ14684 758 aaKnown RBP22.2■■□□□ 1.14
ATG4B-221ENST00000483778 TNNI3KQ59H18 835 aa22.2■■□□□ 1.14
ATG4B-221ENST00000483778 FPGT-TNNI3KV9GXZ4 949 aa22.2■■□□□ 1.14
ATG4B-221ENST00000483778 SURF6O75683 361 aaKnown RBP22.19■■□□□ 1.14
ATG4B-221ENST00000483778 SLC9C1Q4G0N8 1177 aa22.19■■□□□ 1.14
ATG4B-221ENST00000483778 PRPF38BQ5VTL8 546 aaKnown RBP22.19■■□□□ 1.14
ATG4B-221ENST00000483778 SIPA1L1O43166 1804 aa22.19■■□□□ 1.14
ATG4B-221ENST00000483778 PSMC4P43686 418 aa22.18■■□□□ 1.14
ATG4B-221ENST00000483778 ARHGEF6Q15052 776 aa22.18■■□□□ 1.14
ATG4B-221ENST00000483778 SH3RF3Q8TEJ3 882 aaPredicted RBP22.18■■□□□ 1.14
ATG4B-221ENST00000483778 PICK1Q9NRD5 415 aa22.18■■□□□ 1.14
ATG4B-221ENST00000483778 LRP2BPQ9P2M1 347 aa22.18■■□□□ 1.14
ATG4B-221ENST00000483778 A0A0G2JLL6 359 aaPredicted RBP22.17■■□□□ 1.14
ATG4B-221ENST00000483778 CTNND1O60716 968 aaKnown RBP22.17■■□□□ 1.14
ATG4B-221ENST00000483778 CYP2E1P05181 493 aaPredicted RBP22.17■■□□□ 1.14
ATG4B-221ENST00000483778 LDHCP07864 332 aa22.17■■□□□ 1.14
ATG4B-221ENST00000483778 UQCRFS1P1P0C7P4 283 aa22.17■■□□□ 1.14
ATG4B-221ENST00000483778 KIF22Q14807 665 aa22.17■■□□□ 1.14
ATG4B-221ENST00000483778 PRRT2Q7Z6L0 340 aaPredicted RBP22.17■■□□□ 1.14
ATG4B-221ENST00000483778 ADGRA1Q86SQ6 560 aa22.17■■□□□ 1.14
ATG4B-221ENST00000483778 ITPRIPQ8IWB1 547 aa22.17■■□□□ 1.14
ATG4B-221ENST00000483778 GPR108Q9NPR9 543 aa22.17■■□□□ 1.14
ATG4B-221ENST00000483778 TLR7Q9NYK1 1049 aaKnown RBP22.17■■□□□ 1.14
ATG4B-221ENST00000483778 NPM3O75607 178 aaKnown RBP22.16■■□□□ 1.14
ATG4B-221ENST00000483778 BCRP11274 1271 aa22.16■■□□□ 1.14
ATG4B-221ENST00000483778 GSTO1P78417 241 aa22.16■■□□□ 1.14
ATG4B-221ENST00000483778 OS9Q13438 667 aaPredicted RBP22.16■■□□□ 1.14
ATG4B-221ENST00000483778 GADL1Q6ZQY3 521 aa22.16■■□□□ 1.14
ATG4B-221ENST00000483778 NOP58Q9Y2X3 529 aaKnown RBP22.16■■□□□ 1.14
ATG4B-221ENST00000483778 FOCADQ5VW36 1801 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 TRIM75PA6NK02 468 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 TBC1D12O60347 775 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 OSBPP22059 807 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 ZAP70P43403 619 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 TTC39AQ5SRH9 613 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 FTSJ3Q8IY81 847 aaKnown RBP22.15■■□□□ 1.14
ATG4B-221ENST00000483778 TEX11Q8IYF3 940 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 PANK1Q8TE04 598 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 CCDC8Q9H0W5 538 aaPredicted RBP22.15■■□□□ 1.14
ATG4B-221ENST00000483778 OSBPL5Q9H0X9 879 aaPredicted RBP22.15■■□□□ 1.14
ATG4B-221ENST00000483778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.15■■□□□ 1.14
ATG4B-221ENST00000483778 PIH1D3Q9NQM4 214 aaKnown RBP22.15■■□□□ 1.14
ATG4B-221ENST00000483778 SRRDQ9UH36 339 aa22.15■■□□□ 1.14
ATG4B-221ENST00000483778 NBPF11Q86T75 865 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms