RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 HMGN5P82970 282 aaKnown RBP16.51■□□□□ 0.23
CLK3-204ENST00000483723 DIXDC1Q155Q3 683 aa16.51■□□□□ 0.23
CLK3-204ENST00000483723 SKOR2Q2VWA4 1001 aaPredicted RBP16.51■□□□□ 0.23
CLK3-204ENST00000483723 PODNQ7Z5L7 613 aa16.51■□□□□ 0.23
CLK3-204ENST00000483723 LY9Q9HBG7 655 aa16.51■□□□□ 0.23
CLK3-204ENST00000483723 LMBRD1Q9NUN5 540 aa16.51■□□□□ 0.23
CLK3-204ENST00000483723 CDK5RAP2Q96SN8 1893 aa16.51■□□□□ 0.23
CLK3-204ENST00000483723 CCT2P78371 535 aaKnown RBP16.5■□□□□ 0.23
CLK3-204ENST00000483723 FOXD4L5Q5VV16 416 aaPredicted RBP16.5■□□□□ 0.23
CLK3-204ENST00000483723 MCTP1Q6DN14 999 aa16.5■□□□□ 0.23
CLK3-204ENST00000483723 FOXD4L4Q8WXT5 416 aaPredicted RBP16.5■□□□□ 0.23
CLK3-204ENST00000483723 ARPP21Q9UBL0 812 aaPredicted RBP16.5■□□□□ 0.23
CLK3-204ENST00000483723 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLK3-204ENST00000483723 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
CLK3-204ENST00000483723 ORC4O43929 436 aa16.5■□□□□ 0.23
CLK3-204ENST00000483723 FKBP1AP62942 108 aaKnown RBP16.5■□□□□ 0.23
CLK3-204ENST00000483723 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
CLK3-204ENST00000483723 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
CLK3-204ENST00000483723 NCOA5Q9HCD5 579 aaKnown RBP16.5■□□□□ 0.23
CLK3-204ENST00000483723 CYP2D7A0A087X1C5 515 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 PLCG2P16885 1265 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 KCNA3P22001 575 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 NT5C2P49902 561 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 DOK7Q18PE1 504 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 TMEM67Q5HYA8 995 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 CERS5Q8N5B7 392 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 ESR2Q92731 530 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 NOL10Q9BSC4 688 aaKnown RBP16.49■□□□□ 0.23
CLK3-204ENST00000483723 SENP2Q9HC62 589 aa16.49■□□□□ 0.23
CLK3-204ENST00000483723 NID2Q14112 1375 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 ZNF646O15015 1829 aaPredicted RBP16.48■□□□□ 0.23
CLK3-204ENST00000483723 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
CLK3-204ENST00000483723 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
CLK3-204ENST00000483723 BTDP43251 543 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 RHBDL3P58872 404 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 SEC23AQ15436 765 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 C12orf60Q5U649 245 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 APOA5Q6Q788 366 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 ATP6V1DQ9Y5K8 247 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 TCHHQ07283 1943 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
CLK3-204ENST00000483723 RGS22Q8NE09 1264 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 SUPT20HQ8NEM7 779 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 CHAMP1Q96JM3 812 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 MRIQ9BWK5 157 aa16.48■□□□□ 0.23
CLK3-204ENST00000483723 FDPSP14324 419 aaKnown RBP16.47■□□□□ 0.23
CLK3-204ENST00000483723 USP5P45974 858 aa16.47■□□□□ 0.23
CLK3-204ENST00000483723 RCAN1P53805 252 aa16.47■□□□□ 0.23
CLK3-204ENST00000483723 SART3Q15020 963 aaKnown RBP16.47■□□□□ 0.23
CLK3-204ENST00000483723 TTLL6Q8N841 843 aa16.47■□□□□ 0.23
CLK3-204ENST00000483723 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
CLK3-204ENST00000483723 KIF3AQ9Y496 699 aa16.47■□□□□ 0.23
CLK3-204ENST00000483723 ROBO3Q96MS0 1386 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 FOCADQ5VW36 1801 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
CLK3-204ENST00000483723 USP17L8P0C7I0 530 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 CYP2D6P10635 497 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 KIAA2012Q0VF49 1180 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 CDC37L1Q7L3B6 337 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 TMEM87AQ8NBN3 555 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 NAV1Q8NEY1 1877 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 FAM217BQ9NTX9 383 aaPredicted RBP16.46■□□□□ 0.23
CLK3-204ENST00000483723 MCM9Q9NXL9 1143 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 DAGLAQ9Y4D2 1042 aa16.46■□□□□ 0.23
CLK3-204ENST00000483723 DDX60LQ5H9U9 1706 aaKnown RBP16.46■□□□□ 0.22
CLK3-204ENST00000483723 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
CLK3-204ENST00000483723 G3V3G9 751 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 ZBTB43O43298 467 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 PRPF40AO75400 957 aaKnown RBP16.45■□□□□ 0.22
CLK3-204ENST00000483723 EVX2Q03828 476 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 GSE1Q14687 1217 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 WTAPQ15007 396 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 DCAF8Q5TAQ9 597 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 STRIP1Q5VSL9 837 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 FAM184AQ8NB25 1140 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 TGFBRAP1Q8WUH2 860 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 TOMM22Q9NS69 142 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 SCN9AQ15858 1988 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 DPEP1P16444 411 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 METAP2P50579 478 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLK3-204ENST00000483723 NTRK3Q16288 839 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 HHIPL2Q6UWX4 724 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 DBNDD1Q9H9R9 158 aa16.45■□□□□ 0.22
CLK3-204ENST00000483723 ERICH2A1L162 156 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 CCDC69A6NI79 296 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 C21orf2O43822 256 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 ECE2O60344 883 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 TGFB2P61812 414 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 PDE4BQ07343 736 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 DACT2Q5SW24 774 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 TEX11Q8IYF3 940 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 RTKN2Q8IZC4 609 aa16.44■□□□□ 0.22
CLK3-204ENST00000483723 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms