RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 FOCADQ5VW36 1801 aa19.58■□□□□ 0.72
CYTH3-206ENST00000478541 COL2A1P02458 1487 aaPredicted RBP19.57■□□□□ 0.72
CYTH3-206ENST00000478541 NAA16Q6N069 864 aaPredicted RBP19.57■□□□□ 0.72
CYTH3-206ENST00000478541 ERO1BQ86YB8 467 aa19.57■□□□□ 0.72
CYTH3-206ENST00000478541 ZKSCAN4Q969J2 545 aaPredicted RBP19.57■□□□□ 0.72
CYTH3-206ENST00000478541 DDX4Q9NQI0 724 aaKnown RBP19.57■□□□□ 0.72
CYTH3-206ENST00000478541 IGF2BP3O00425 579 aaKnown RBP eCLIP19.56■□□□□ 0.72
CYTH3-206ENST00000478541 TBC1D8O95759 1140 aa19.56■□□□□ 0.72
CYTH3-206ENST00000478541 MAP3K10Q02779 954 aa19.56■□□□□ 0.72
CYTH3-206ENST00000478541 SH3BP5LQ7L8J4 393 aa19.56■□□□□ 0.72
CYTH3-206ENST00000478541 CNKSR2Q8WXI2 1034 aa19.56■□□□□ 0.72
CYTH3-206ENST00000478541 MS4A4AQ96JQ5 239 aa19.56■□□□□ 0.72
CYTH3-206ENST00000478541 GTF2A2P52657 109 aa19.55■□□□□ 0.72
CYTH3-206ENST00000478541 PPP4CP60510 307 aa19.55■□□□□ 0.72
CYTH3-206ENST00000478541 OTUD7BQ6GQQ9 843 aa19.55■□□□□ 0.72
CYTH3-206ENST00000478541 TMED8Q6PL24 325 aaPredicted RBP19.55■□□□□ 0.72
CYTH3-206ENST00000478541 NOL10Q9BSC4 688 aaKnown RBP19.55■□□□□ 0.72
CYTH3-206ENST00000478541 PIH1D3Q9NQM4 214 aaKnown RBP19.55■□□□□ 0.72
CYTH3-206ENST00000478541 DDTLA6NHG4 134 aaPredicted RBP19.54■□□□□ 0.72
CYTH3-206ENST00000478541 BAG3O95817 575 aa19.54■□□□□ 0.72
CYTH3-206ENST00000478541 INPP5BP32019 993 aa19.54■□□□□ 0.72
CYTH3-206ENST00000478541 PPATQ06203 517 aa19.54■□□□□ 0.72
CYTH3-206ENST00000478541 PICALMQ13492 652 aa19.54■□□□□ 0.72
CYTH3-206ENST00000478541 NOL9Q5SY16 702 aaKnown RBP19.54■□□□□ 0.72
CYTH3-206ENST00000478541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.54■□□□□ 0.72
CYTH3-206ENST00000478541 OTUD5Q96G74 571 aa19.54■□□□□ 0.72
CYTH3-206ENST00000478541 GPR25O00155 361 aa19.53■□□□□ 0.72
CYTH3-206ENST00000478541 APBB1O00213 710 aa19.53■□□□□ 0.72
CYTH3-206ENST00000478541 IFIT2P09913 472 aaKnown RBP19.53■□□□□ 0.72
CYTH3-206ENST00000478541 PLCG2P16885 1265 aa19.53■□□□□ 0.72
CYTH3-206ENST00000478541 RRP1P56182 461 aaKnown RBP19.53■□□□□ 0.72
CYTH3-206ENST00000478541 PPIL2Q13356 520 aa19.53■□□□□ 0.72
CYTH3-206ENST00000478541 ADGRA1Q86SQ6 560 aa19.53■□□□□ 0.72
CYTH3-206ENST00000478541 ZSCAN29Q8IWY8 852 aaPredicted RBP19.53■□□□□ 0.72
CYTH3-206ENST00000478541 ZNF296Q8WUU4 475 aaPredicted RBP19.53■□□□□ 0.72
CYTH3-206ENST00000478541 ABHD8Q96I13 439 aa19.53■□□□□ 0.72
CYTH3-206ENST00000478541 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
CYTH3-206ENST00000478541 PTPN18Q99952 460 aa19.53■□□□□ 0.72
CYTH3-206ENST00000478541 MCOLN1Q9GZU1 580 aa19.53■□□□□ 0.72
CYTH3-206ENST00000478541 DOCK1Q14185 1865 aa19.52■□□□□ 0.72
CYTH3-206ENST00000478541 PHF20L1A8MW92 1017 aa19.52■□□□□ 0.72
CYTH3-206ENST00000478541 TBC1D12O60347 775 aa19.52■□□□□ 0.72
CYTH3-206ENST00000478541 DGKZQ13574 1117 aa19.52■□□□□ 0.72
CYTH3-206ENST00000478541 TEX11Q8IYF3 940 aa19.52■□□□□ 0.72
CYTH3-206ENST00000478541 SH3RF3Q8TEJ3 882 aaPredicted RBP19.52■□□□□ 0.72
CYTH3-206ENST00000478541 BRI3BPQ8WY22 251 aa19.52■□□□□ 0.72
CYTH3-206ENST00000478541 OSBPL5Q9H0X9 879 aaPredicted RBP19.52■□□□□ 0.72
CYTH3-206ENST00000478541 AATFQ9NY61 560 aaKnown RBP eCLIP19.52■□□□□ 0.72
CYTH3-206ENST00000478541 CCL15-CCL14A0A0B4J2E2 113 aa19.51■□□□□ 0.71
CYTH3-206ENST00000478541 IRF6O14896 467 aa19.51■□□□□ 0.71
CYTH3-206ENST00000478541 CCL15Q16663 113 aa19.51■□□□□ 0.71
CYTH3-206ENST00000478541 R3HDMLQ9H3Y0 253 aa19.51■□□□□ 0.71
CYTH3-206ENST00000478541 ANTXR1Q9H6X2 564 aa19.51■□□□□ 0.71
CYTH3-206ENST00000478541 NDUFB9Q9Y6M9 179 aa19.51■□□□□ 0.71
CYTH3-206ENST00000478541 CAPN15O75808 1086 aa19.5■□□□□ 0.71
CYTH3-206ENST00000478541 IDH1O75874 414 aaKnown RBP19.5■□□□□ 0.71
CYTH3-206ENST00000478541 CETPP11597 493 aa19.5■□□□□ 0.71
CYTH3-206ENST00000478541 MAP3K12Q12852 859 aa19.5■□□□□ 0.71
CYTH3-206ENST00000478541 SNAPC2Q13487 334 aa19.5■□□□□ 0.71
CYTH3-206ENST00000478541 TTF1Q15361 905 aaPredicted RBP19.5■□□□□ 0.71
CYTH3-206ENST00000478541 CTU1Q7Z7A3 348 aaKnown RBP19.5■□□□□ 0.71
CYTH3-206ENST00000478541 CERS3Q8IU89 383 aa19.5■□□□□ 0.71
CYTH3-206ENST00000478541 LRRCC1Q9C099 1032 aa19.5■□□□□ 0.71
CYTH3-206ENST00000478541 SIPA1L1O43166 1804 aa19.5■□□□□ 0.71
CYTH3-206ENST00000478541 FKTNO75072 461 aa19.49■□□□□ 0.71
CYTH3-206ENST00000478541 CYP7A1P22680 504 aa19.49■□□□□ 0.71
CYTH3-206ENST00000478541 DCTPP1Q9H773 170 aa19.49■□□□□ 0.71
CYTH3-206ENST00000478541 ZCCHC17Q9NP64 241 aaKnown RBP19.49■□□□□ 0.71
CYTH3-206ENST00000478541 KCNH4Q9UQ05 1017 aa19.49■□□□□ 0.71
CYTH3-206ENST00000478541 PHIPQ8WWQ0 1821 aa19.48■□□□□ 0.71
CYTH3-206ENST00000478541 CTNND1O60716 968 aaKnown RBP19.48■□□□□ 0.71
CYTH3-206ENST00000478541 CRHR2Q13324 411 aa19.48■□□□□ 0.71
CYTH3-206ENST00000478541 SCYL3Q8IZE3 742 aa19.48■□□□□ 0.71
CYTH3-206ENST00000478541 MAGEB6Q8N7X4 407 aa19.48■□□□□ 0.71
CYTH3-206ENST00000478541 DHX36Q9H2U1 1008 aaKnown RBP19.48■□□□□ 0.71
CYTH3-206ENST00000478541 ATAD5Q96QE3 1844 aa19.48■□□□□ 0.71
CYTH3-206ENST00000478541 ATP5JP18859 108 aa19.47■□□□□ 0.71
CYTH3-206ENST00000478541 FAM43AQ8N2R8 423 aa19.47■□□□□ 0.71
CYTH3-206ENST00000478541 FLT1P17948 1338 aa19.47■□□□□ 0.71
CYTH3-206ENST00000478541 PTPRFP10586 1907 aa19.47■□□□□ 0.71
CYTH3-206ENST00000478541 MYH1P12882 1939 aa19.47■□□□□ 0.71
CYTH3-206ENST00000478541 PKN2Q16513 984 aaKnown RBP19.46■□□□□ 0.71
CYTH3-206ENST00000478541 TGFBRAP1Q8WUH2 860 aa19.46■□□□□ 0.71
CYTH3-206ENST00000478541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.46■□□□□ 0.71
CYTH3-206ENST00000478541 PI4KBQ9UBF8 816 aa19.46■□□□□ 0.71
CYTH3-206ENST00000478541 HERC5Q9UII4 1024 aaKnown RBP19.46■□□□□ 0.71
CYTH3-206ENST00000478541 CXCL11O14625 94 aa19.45■□□□□ 0.7
CYTH3-206ENST00000478541 SLURP2P0DP57 97 aa19.45■□□□□ 0.7
CYTH3-206ENST00000478541 PTPRAP18433 802 aa19.45■□□□□ 0.7
CYTH3-206ENST00000478541 DYNLL1P63167 89 aaKnown RBP19.45■□□□□ 0.7
CYTH3-206ENST00000478541 TAF1CQ15572 869 aaPredicted RBP19.45■□□□□ 0.7
CYTH3-206ENST00000478541 MAPKAPK5Q8IW41 473 aa19.45■□□□□ 0.7
CYTH3-206ENST00000478541 PICK1Q9NRD5 415 aa19.45■□□□□ 0.7
CYTH3-206ENST00000478541 PCDHB15Q9Y5E8 787 aa19.45■□□□□ 0.7
CYTH3-206ENST00000478541 MYH7P12883 1935 aa19.45■□□□□ 0.7
CYTH3-206ENST00000478541 BTBD19C9JJ37 291 aa19.44■□□□□ 0.7
CYTH3-206ENST00000478541 GOLIM4O00461 696 aa19.44■□□□□ 0.7
CYTH3-206ENST00000478541 METTL16Q86W50 562 aaKnown RBP19.44■□□□□ 0.7
CYTH3-206ENST00000478541 MIGA1Q8NAN2 632 aa19.44■□□□□ 0.7
CYTH3-206ENST00000478541 DNAJC2Q99543 621 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms