RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 ERO1BQ86YB8 467 aa14.96□□□□□ -0.01
PTPN7-210ENST00000477625 ZSCAN29Q8IWY8 852 aaPredicted RBP14.96□□□□□ -0.01
PTPN7-210ENST00000477625 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
PTPN7-210ENST00000477625 MS4A4AQ96JQ5 239 aa14.96□□□□□ -0.01
PTPN7-210ENST00000477625 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
PTPN7-210ENST00000477625 DDX4Q9NQI0 724 aaKnown RBP14.96□□□□□ -0.01
PTPN7-210ENST00000477625 PIH1D3Q9NQM4 214 aaKnown RBP14.96□□□□□ -0.01
PTPN7-210ENST00000477625 IGF2BP3O00425 579 aaKnown RBP eCLIP14.95□□□□□ -0.02
PTPN7-210ENST00000477625 BAG3O95817 575 aa14.95□□□□□ -0.02
PTPN7-210ENST00000477625 INPP5BP32019 993 aa14.95□□□□□ -0.02
PTPN7-210ENST00000477625 GTF2A2P52657 109 aa14.95□□□□□ -0.02
PTPN7-210ENST00000477625 NOM1Q5C9Z4 860 aaKnown RBP14.95□□□□□ -0.02
PTPN7-210ENST00000477625 ABHD8Q96I13 439 aa14.95□□□□□ -0.02
PTPN7-210ENST00000477625 PTPN18Q99952 460 aa14.95□□□□□ -0.02
PTPN7-210ENST00000477625 NOL10Q9BSC4 688 aaKnown RBP14.95□□□□□ -0.02
PTPN7-210ENST00000477625 OTOFQ9HC10 1997 aa14.94□□□□□ -0.02
PTPN7-210ENST00000477625 DDTLA6NHG4 134 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-210ENST00000477625 GPR25O00155 361 aa14.94□□□□□ -0.02
PTPN7-210ENST00000477625 IFIT2P09913 472 aaKnown RBP14.94□□□□□ -0.02
PTPN7-210ENST00000477625 PPP4CP60510 307 aa14.94□□□□□ -0.02
PTPN7-210ENST00000477625 MAP3K10Q02779 954 aa14.94□□□□□ -0.02
PTPN7-210ENST00000477625 DGKZQ13574 1117 aa14.94□□□□□ -0.02
PTPN7-210ENST00000477625 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-210ENST00000477625 MCOLN1Q9GZU1 580 aa14.94□□□□□ -0.02
PTPN7-210ENST00000477625 R3HDMLQ9H3Y0 253 aa14.94□□□□□ -0.02
PTPN7-210ENST00000477625 ATRNL1Q5VV63 1379 aa14.94□□□□□ -0.02
PTPN7-210ENST00000477625 PHF20L1A8MW92 1017 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 IRF6O14896 467 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 IDH1O75874 414 aaKnown RBP14.93□□□□□ -0.02
PTPN7-210ENST00000477625 PLCG2P16885 1265 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 PPATQ06203 517 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 PPIL2Q13356 520 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 NOL9Q5SY16 702 aaKnown RBP14.93□□□□□ -0.02
PTPN7-210ENST00000477625 ADGRA1Q86SQ6 560 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 TEX11Q8IYF3 940 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 SH3RF3Q8TEJ3 882 aaPredicted RBP14.93□□□□□ -0.02
PTPN7-210ENST00000477625 BRI3BPQ8WY22 251 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 ANTXR1Q9H6X2 564 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 AATFQ9NY61 560 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTPN7-210ENST00000477625 NDUFB9Q9Y6M9 179 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 AK9Q5TCS8 1911 aa14.93□□□□□ -0.02
PTPN7-210ENST00000477625 CCL15-CCL14A0A0B4J2E2 113 aa14.92□□□□□ -0.02
PTPN7-210ENST00000477625 CETPP11597 493 aa14.92□□□□□ -0.02
PTPN7-210ENST00000477625 CYP7A1P22680 504 aa14.92□□□□□ -0.02
PTPN7-210ENST00000477625 RRP1P56182 461 aaKnown RBP14.92□□□□□ -0.02
PTPN7-210ENST00000477625 SNAPC2Q13487 334 aa14.92□□□□□ -0.02
PTPN7-210ENST00000477625 CCL15Q16663 113 aa14.92□□□□□ -0.02
PTPN7-210ENST00000477625 TMED8Q6PL24 325 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-210ENST00000477625 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
PTPN7-210ENST00000477625 OSBPL5Q9H0X9 879 aaPredicted RBP14.92□□□□□ -0.02
PTPN7-210ENST00000477625 BCL11AQ9H165 835 aa14.92□□□□□ -0.02
PTPN7-210ENST00000477625 LAMB1P07942 1786 aa14.91□□□□□ -0.02
PTPN7-210ENST00000477625 TBC1D12O60347 775 aa14.91□□□□□ -0.02
PTPN7-210ENST00000477625 FKTNO75072 461 aa14.91□□□□□ -0.02
PTPN7-210ENST00000477625 MAP3K12Q12852 859 aa14.91□□□□□ -0.02
PTPN7-210ENST00000477625 TTF1Q15361 905 aaPredicted RBP14.91□□□□□ -0.02
PTPN7-210ENST00000477625 CTU1Q7Z7A3 348 aaKnown RBP14.91□□□□□ -0.02
PTPN7-210ENST00000477625 LRRCC1Q9C099 1032 aa14.91□□□□□ -0.02
PTPN7-210ENST00000477625 CTNND1O60716 968 aaKnown RBP14.9□□□□□ -0.02
PTPN7-210ENST00000477625 CRHR2Q13324 411 aa14.9□□□□□ -0.02
PTPN7-210ENST00000477625 MAGEB6Q8N7X4 407 aa14.9□□□□□ -0.02
PTPN7-210ENST00000477625 TGFBRAP1Q8WUH2 860 aa14.9□□□□□ -0.02
PTPN7-210ENST00000477625 DCTPP1Q9H773 170 aa14.9□□□□□ -0.02
PTPN7-210ENST00000477625 PICK1Q9NRD5 415 aa14.9□□□□□ -0.02
PTPN7-210ENST00000477625 COL2A1P02458 1487 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-210ENST00000477625 SLURP2P0DP57 97 aa14.89□□□□□ -0.03
PTPN7-210ENST00000477625 CERS3Q8IU89 383 aa14.89□□□□□ -0.03
PTPN7-210ENST00000477625 SCYL3Q8IZE3 742 aa14.89□□□□□ -0.03
PTPN7-210ENST00000477625 FAM43AQ8N2R8 423 aa14.89□□□□□ -0.03
PTPN7-210ENST00000477625 DHX36Q9H2U1 1008 aaKnown RBP14.89□□□□□ -0.03
PTPN7-210ENST00000477625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.89□□□□□ -0.03
PTPN7-210ENST00000477625 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
PTPN7-210ENST00000477625 KCNH4Q9UQ05 1017 aa14.89□□□□□ -0.03
PTPN7-210ENST00000477625 GOLIM4O00461 696 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 CXCL11O14625 94 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 SMARCA5O60264 1052 aaPredicted RBP14.88□□□□□ -0.03
PTPN7-210ENST00000477625 PTPRAP18433 802 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 ATP5JP18859 108 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 DYNLL1P63167 89 aaKnown RBP14.88□□□□□ -0.03
PTPN7-210ENST00000477625 PKN2Q16513 984 aaKnown RBP14.88□□□□□ -0.03
PTPN7-210ENST00000477625 MAPKAPK5Q8IW41 473 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 MIGA1Q8NAN2 632 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 DNAJC2Q99543 621 aaKnown RBP14.88□□□□□ -0.03
PTPN7-210ENST00000477625 ZFYVE28Q9HCC9 887 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 ZCCHC17Q9NP64 241 aaKnown RBP14.88□□□□□ -0.03
PTPN7-210ENST00000477625 PCDHB15Q9Y5E8 787 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 ZHX2Q9Y6X8 837 aa14.88□□□□□ -0.03
PTPN7-210ENST00000477625 DOCK2Q92608 1830 aa14.87□□□□□ -0.03
PTPN7-210ENST00000477625 MYO5AQ9Y4I1 1855 aaKnown RBP14.87□□□□□ -0.03
PTPN7-210ENST00000477625 CCDC85CA6NKD9 419 aa14.87□□□□□ -0.03
PTPN7-210ENST00000477625 BTBD19C9JJ37 291 aa14.87□□□□□ -0.03
PTPN7-210ENST00000477625 TAF1CQ15572 869 aaPredicted RBP14.87□□□□□ -0.03
PTPN7-210ENST00000477625 SLC9C2Q5TAH2 1124 aa14.87□□□□□ -0.03
PTPN7-210ENST00000477625 FOXP4Q8IVH2 680 aaPredicted RBP14.87□□□□□ -0.03
PTPN7-210ENST00000477625 BOLA2Q9H3K6 86 aa14.87□□□□□ -0.03
PTPN7-210ENST00000477625 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
PTPN7-210ENST00000477625 MAST2Q6P0Q8 1798 aa14.87□□□□□ -0.03
PTPN7-210ENST00000477625 FLT1P17948 1338 aa14.87□□□□□ -0.03
PTPN7-210ENST00000477625 FAM196BA6NMK8 535 aa14.86□□□□□ -0.03
PTPN7-210ENST00000477625 HAUS7Q99871 368 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms