RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
NUP188-204ENST00000467044 RRAGCQ9HB90 399 aa12.81□□□□□ -0.36
NUP188-204ENST00000467044 DDX4Q9NQI0 724 aaKnown RBP12.81□□□□□ -0.36
NUP188-204ENST00000467044 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
NUP188-204ENST00000467044 FLT1P17948 1338 aa12.81□□□□□ -0.36
NUP188-204ENST00000467044 MYH1P12882 1939 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 USP17L12C9JPN9 530 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 USP17L21D6R901 530 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 ZNF213O14771 459 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
NUP188-204ENST00000467044 TNNI2P48788 182 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 HAND2P61296 217 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
NUP188-204ENST00000467044 EAPPQ56P03 285 aaPredicted RBP12.8□□□□□ -0.36
NUP188-204ENST00000467044 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
NUP188-204ENST00000467044 STK11IPQ8N1F8 1099 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 IDI2Q9BXS1 227 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 TAF1DQ9H5J8 278 aaPredicted RBP12.8□□□□□ -0.36
NUP188-204ENST00000467044 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 SCAF8Q9UPN6 1271 aaKnown RBP12.8□□□□□ -0.36
NUP188-204ENST00000467044 SCN4AP35499 1836 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 NAV1Q8NEY1 1877 aa12.8□□□□□ -0.36
NUP188-204ENST00000467044 WDR90Q96KV7 1748 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 POTECB2RU33 542 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 SLC27A2O14975 620 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 ENTPD3O75355 529 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 HSPA4P34932 840 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 NECTIN1Q15223 517 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 ANGEL2Q5VTE6 544 aaKnown RBP12.79□□□□□ -0.36
NUP188-204ENST00000467044 RNF20Q5VTR2 975 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 CTR9Q6PD62 1173 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 USP50Q70EL3 339 aaPredicted RBP12.79□□□□□ -0.36
NUP188-204ENST00000467044 ZFPM1Q8IX07 1006 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 OSBPL5Q9H0X9 879 aaPredicted RBP12.79□□□□□ -0.36
NUP188-204ENST00000467044 ARPP21Q9UBL0 812 aaPredicted RBP12.79□□□□□ -0.36
NUP188-204ENST00000467044 MKRN1Q9UHC7 482 aaKnown RBP12.79□□□□□ -0.36
NUP188-204ENST00000467044 PALD1Q9ULE6 856 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
NUP188-204ENST00000467044 POLR2AP24928 1970 aaKnown RBP12.78□□□□□ -0.36
NUP188-204ENST00000467044 CYP2D6P10635 497 aa12.78□□□□□ -0.36
NUP188-204ENST00000467044 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
NUP188-204ENST00000467044 ZKSCAN1P17029 563 aaPredicted RBP12.78□□□□□ -0.36
NUP188-204ENST00000467044 CTDSPL2Q05D32 466 aa12.78□□□□□ -0.36
NUP188-204ENST00000467044 PPARAQ07869 468 aa12.78□□□□□ -0.36
NUP188-204ENST00000467044 TNFAIP1Q13829 316 aa12.78□□□□□ -0.36
NUP188-204ENST00000467044 FKBP1CQ5VVH2 108 aa12.78□□□□□ -0.36
NUP188-204ENST00000467044 PNMA8AQ86V59 439 aaPredicted RBP12.78□□□□□ -0.36
NUP188-204ENST00000467044 APOBEC3FQ8IUX4 373 aaKnown RBP12.78□□□□□ -0.36
NUP188-204ENST00000467044 FAM151AQ8WW52 585 aa12.78□□□□□ -0.36
NUP188-204ENST00000467044 GGA3Q9NZ52 723 aa12.78□□□□□ -0.36
NUP188-204ENST00000467044 ZMYM6O95789 1325 aa12.78□□□□□ -0.36
NUP188-204ENST00000467044 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
NUP188-204ENST00000467044 HLA-DOAP06340 250 aa12.77□□□□□ -0.37
NUP188-204ENST00000467044 CYP21A2P08686 494 aa12.77□□□□□ -0.37
NUP188-204ENST00000467044 RASA3Q14644 834 aa12.77□□□□□ -0.37
NUP188-204ENST00000467044 SBK1Q52WX2 424 aa12.77□□□□□ -0.37
NUP188-204ENST00000467044 C12orf60Q5U649 245 aa12.77□□□□□ -0.37
NUP188-204ENST00000467044 TTC6Q86TZ1 520 aa12.77□□□□□ -0.37
NUP188-204ENST00000467044 FAM83AQ86UY5 434 aa12.77□□□□□ -0.37
NUP188-204ENST00000467044 DCPSQ96C86 337 aaKnown RBP12.77□□□□□ -0.37
NUP188-204ENST00000467044 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
NUP188-204ENST00000467044 DDTLA6NHG4 134 aaPredicted RBP12.76□□□□□ -0.37
NUP188-204ENST00000467044 SMIM22K7EJ46 135 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 SLC3A2P08195 630 aaKnown RBP12.76□□□□□ -0.37
NUP188-204ENST00000467044 PLCD1P51178 756 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 EVX2Q03828 476 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 RASEFQ8IZ41 740 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 TBC1D32Q96NH3 1257 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 DHX36Q9H2U1 1008 aaKnown RBP12.76□□□□□ -0.37
NUP188-204ENST00000467044 TOMM22Q9NS69 142 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 SNX14Q9Y5W7 946 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
NUP188-204ENST00000467044 RBM25P49756 843 aaKnown RBP12.75□□□□□ -0.37
NUP188-204ENST00000467044 MFSD6Q6ZSS7 791 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 SH3BP5LQ7L8J4 393 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 SULF1Q8IWU6 871 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
NUP188-204ENST00000467044 ZC3H15Q8WU90 426 aaKnown RBP12.75□□□□□ -0.37
NUP188-204ENST00000467044 DYNLL2Q96FJ2 89 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 CSRNP1Q96S65 589 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 TRIM34Q9BYJ4 488 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 PITPNM2Q9BZ72 1349 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 DEFB129Q9H1M3 183 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 INCENPQ9NQS7 918 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 PI4KBQ9UBF8 816 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 TAF6LQ9Y6J9 622 aa12.75□□□□□ -0.37
NUP188-204ENST00000467044 LAMA4Q16363 1823 aa12.74□□□□□ -0.37
NUP188-204ENST00000467044 LAMB1P07942 1786 aa12.74□□□□□ -0.37
NUP188-204ENST00000467044 E7EWF7 191 aa12.74□□□□□ -0.37
NUP188-204ENST00000467044 ANAPC15P60006 121 aa12.74□□□□□ -0.37
NUP188-204ENST00000467044 PDE4BQ07343 736 aa12.74□□□□□ -0.37
NUP188-204ENST00000467044 TRDNQ13061 729 aa12.74□□□□□ -0.37
NUP188-204ENST00000467044 KRT32Q14532 448 aa12.74□□□□□ -0.37
NUP188-204ENST00000467044 RRP12Q5JTH9 1297 aaKnown RBP12.74□□□□□ -0.37
NUP188-204ENST00000467044 AKNAD1Q5T1N1 836 aa12.74□□□□□ -0.37
NUP188-204ENST00000467044 PRAMEF18Q5VWM3 479 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms