RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, human

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUMO3-205	ENST00000466861	THSD7B	Q9C0I4	1608 aa		28.21	■■■□□ 2.11
SUMO3-205	ENST00000466861	CDK5RAP2	Q96SN8	1893 aa		28.21	■■■□□ 2.11
SUMO3-205	ENST00000466861	CYP4F22	Q6NT55	531 aa		28.2	■■■□□ 2.1
SUMO3-205	ENST00000466861	TICAM2	Q86XR7	235 aa		28.2	■■■□□ 2.1
SUMO3-205	ENST00000466861	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	28.2	■■■□□ 2.1
SUMO3-205	ENST00000466861	DDX4	Q9NQI0	724 aa	Known RBP	28.2	■■■□□ 2.1
SUMO3-205	ENST00000466861	ZNF157	P51786	506 aa	Predicted RBP	28.19	■■■□□ 2.1
SUMO3-205	ENST00000466861	NOG	Q13253	232 aa		28.19	■■■□□ 2.1
SUMO3-205	ENST00000466861	B4GALNT3	Q6L9W6	998 aa		28.19	■■■□□ 2.1
SUMO3-205	ENST00000466861	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	28.19	■■■□□ 2.1
SUMO3-205	ENST00000466861	MOB2	Q70IA6	237 aa		28.19	■■■□□ 2.1
SUMO3-205	ENST00000466861	ZNF532	Q9HCE3	1301 aa		28.18	■■■□□ 2.1
SUMO3-205	ENST00000466861	ZFY	P08048	801 aa	Predicted RBP	28.18	■■■□□ 2.1
SUMO3-205	ENST00000466861	TSHZ3	Q63HK5	1081 aa		28.18	■■■□□ 2.1
SUMO3-205	ENST00000466861	CDAN1	Q8IWY9	1227 aa		28.18	■■■□□ 2.1
SUMO3-205	ENST00000466861	ANKRD13A	Q8IZ07	590 aa		28.18	■■■□□ 2.1
SUMO3-205	ENST00000466861	RIOK1	Q9BRS2	568 aa	Known RBP	28.18	■■■□□ 2.1
SUMO3-205	ENST00000466861	OSBPL5	Q9H0X9	879 aa	Predicted RBP	28.18	■■■□□ 2.1
SUMO3-205	ENST00000466861	OSBPL3	Q9H4L5	887 aa		28.18	■■■□□ 2.1
SUMO3-205	ENST00000466861	MAGEB6P1	A0A0J9YX57	407 aa		28.17	■■■□□ 2.1
SUMO3-205	ENST00000466861	SLC10A3	P09131	477 aa		28.17	■■■□□ 2.1
SUMO3-205	ENST00000466861	MAP3K10	Q02779	954 aa		28.17	■■■□□ 2.1
SUMO3-205	ENST00000466861	PICALM	Q13492	652 aa		28.17	■■■□□ 2.1
SUMO3-205	ENST00000466861	PRKG1	Q13976	671 aa		28.17	■■■□□ 2.1
SUMO3-205	ENST00000466861	ZNF341	Q9BYN7	854 aa		28.17	■■■□□ 2.1
SUMO3-205	ENST00000466861	DHX36	Q9H2U1	1008 aa	Known RBP	28.17	■■■□□ 2.1
SUMO3-205	ENST00000466861	FAM155A	B1AL88	458 aa	Predicted RBP	28.16	■■■□□ 2.1
SUMO3-205	ENST00000466861	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	28.16	■■■□□ 2.1
SUMO3-205	ENST00000466861	ZFPM1	Q8IX07	1006 aa		28.16	■■■□□ 2.1
SUMO3-205	ENST00000466861	CSRNP1	Q96S65	589 aa		28.16	■■■□□ 2.1
SUMO3-205	ENST00000466861	NEFL	P07196	543 aa		28.15	■■■□□ 2.1
SUMO3-205	ENST00000466861	DYNLL1	P63167	89 aa	Known RBP	28.15	■■■□□ 2.1
SUMO3-205	ENST00000466861	MAP3K9	P80192	1104 aa		28.15	■■■□□ 2.1
SUMO3-205	ENST00000466861	REM2	Q8IYK8	340 aa	Predicted RBP	28.15	■■■□□ 2.1
SUMO3-205	ENST00000466861	MIGA1	Q8NAN2	632 aa		28.15	■■■□□ 2.1
SUMO3-205	ENST00000466861	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	28.15	■■■□□ 2.1
SUMO3-205	ENST00000466861	TBC1D12	O60347	775 aa		28.14	■■■□□ 2.1
SUMO3-205	ENST00000466861	SH3BP5L	Q7L8J4	393 aa		28.14	■■■□□ 2.1
SUMO3-205	ENST00000466861	RASAL3	Q86YV0	1011 aa		28.14	■■■□□ 2.1
SUMO3-205	ENST00000466861	TGFBRAP1	Q8WUH2	860 aa		28.14	■■■□□ 2.1
SUMO3-205	ENST00000466861	ZNF112	Q9UJU3	913 aa		28.14	■■■□□ 2.1
SUMO3-205	ENST00000466861	PLEKHM2	Q8IWE5	1019 aa		28.13	■■■□□ 2.09
SUMO3-205	ENST00000466861	EVI5L	Q96CN4	794 aa		28.13	■■■□□ 2.09
SUMO3-205	ENST00000466861	SLC10A4	Q96EP9	437 aa		28.13	■■■□□ 2.09
SUMO3-205	ENST00000466861	CRNKL1	Q9BZJ0	848 aa	Known RBP	28.13	■■■□□ 2.09
SUMO3-205	ENST00000466861	OTOF	Q9HC10	1997 aa		28.13	■■■□□ 2.09
SUMO3-205	ENST00000466861	FLT1	P17948	1338 aa		28.13	■■■□□ 2.09
SUMO3-205	ENST00000466861	DDTL	A6NHG4	134 aa	Predicted RBP	28.12	■■■□□ 2.09
SUMO3-205	ENST00000466861	MAP2K1	Q02750	393 aa	Predicted RBP	28.12	■■■□□ 2.09
SUMO3-205	ENST00000466861	PI4KB	Q9UBF8	816 aa		28.12	■■■□□ 2.09
SUMO3-205	ENST00000466861	CSAD	Q9Y600	493 aa		28.12	■■■□□ 2.09
SUMO3-205	ENST00000466861	RNF113A	O15541	343 aa	Known RBP	28.11	■■■□□ 2.09
SUMO3-205	ENST00000466861	APPBP2	Q92624	585 aa		28.11	■■■□□ 2.09
SUMO3-205	ENST00000466861	FZD1	Q9UP38	647 aa		28.11	■■■□□ 2.09
SUMO3-205	ENST00000466861	MYH1	P12882	1939 aa		28.11	■■■□□ 2.09
SUMO3-205	ENST00000466861	ZBTB48	P10074	688 aa	Predicted RBP	28.1	■■■□□ 2.09
SUMO3-205	ENST00000466861	USP5	P45974	858 aa		28.1	■■■□□ 2.09
SUMO3-205	ENST00000466861	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28.1	■■■□□ 2.09
SUMO3-205	ENST00000466861	MAPKAPK5	Q8IW41	473 aa		28.1	■■■□□ 2.09
SUMO3-205	ENST00000466861	WRNIP1	Q96S55	665 aa		28.1	■■■□□ 2.09
SUMO3-205	ENST00000466861	HERC5	Q9UII4	1024 aa	Known RBP	28.1	■■■□□ 2.09
SUMO3-205	ENST00000466861	LAMB1	P07942	1786 aa		28.09	■■■□□ 2.09
SUMO3-205	ENST00000466861	GRM1	Q13255	1194 aa		28.09	■■■□□ 2.09
SUMO3-205	ENST00000466861	FOXP4	Q8IVH2	680 aa	Predicted RBP	28.09	■■■□□ 2.09
SUMO3-205	ENST00000466861	TAOK2	Q9UL54	1235 aa		28.09	■■■□□ 2.09
SUMO3-205	ENST00000466861	SPRYD7	Q5W111	196 aa		28.08	■■■□□ 2.09
SUMO3-205	ENST00000466861	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.08	■■■□□ 2.09
SUMO3-205	ENST00000466861	MIGA2	Q7L4E1	593 aa		28.08	■■■□□ 2.09
SUMO3-205	ENST00000466861	METTL16	Q86W50	562 aa	Known RBP	28.08	■■■□□ 2.09
SUMO3-205	ENST00000466861	FSD1	Q9BTV5	496 aa		28.08	■■■□□ 2.09
SUMO3-205	ENST00000466861	VGLL4	Q14135	290 aa		28.07	■■■□□ 2.08
SUMO3-205	ENST00000466861	NOL9	Q5SY16	702 aa	Known RBP	28.07	■■■□□ 2.08
SUMO3-205	ENST00000466861	ERICH6B	Q5W0A0	696 aa		28.07	■■■□□ 2.08
SUMO3-205	ENST00000466861	LCORL	Q8N3X6	602 aa		28.07	■■■□□ 2.08
SUMO3-205	ENST00000466861	AIDA	Q96BJ3	306 aa		28.07	■■■□□ 2.08
SUMO3-205	ENST00000466861	CLMN	Q96JQ2	1002 aa		28.07	■■■□□ 2.08
SUMO3-205	ENST00000466861	ATP8A2	Q9NTI2	1148 aa		28.07	■■■□□ 2.08
SUMO3-205	ENST00000466861	AOC2	O75106	756 aa		28.06	■■■□□ 2.08
SUMO3-205	ENST00000466861	MBD4	O95243	580 aa		28.06	■■■□□ 2.08
SUMO3-205	ENST00000466861	HLA-DOA	P06340	250 aa		28.06	■■■□□ 2.08
SUMO3-205	ENST00000466861	TTC6	Q86TZ1	520 aa		28.06	■■■□□ 2.08
SUMO3-205	ENST00000466861	WBP1L	Q9NX94	342 aa		28.06	■■■□□ 2.08
SUMO3-205	ENST00000466861	PHF20L1	A8MW92	1017 aa		28.05	■■■□□ 2.08
SUMO3-205	ENST00000466861	KIF23	Q02241	960 aa	Predicted RBP	28.05	■■■□□ 2.08
SUMO3-205	ENST00000466861	WNK4	Q96J92	1243 aa		28.05	■■■□□ 2.08
SUMO3-205	ENST00000466861	PUS7L	Q9H0K6	701 aa	Known RBP	28.05	■■■□□ 2.08
SUMO3-205	ENST00000466861	ARMT1	Q9H993	441 aa		28.05	■■■□□ 2.08
SUMO3-205	ENST00000466861	NAV1	Q8NEY1	1877 aa		28.04	■■■□□ 2.08
SUMO3-205	ENST00000466861	DDX60L	Q5H9U9	1706 aa	Known RBP	28.04	■■■□□ 2.08
SUMO3-205	ENST00000466861	SPDYE5	A6NIY4	337 aa		28.04	■■■□□ 2.08
SUMO3-205	ENST00000466861	INHBE	P58166	350 aa		28.04	■■■□□ 2.08
SUMO3-205	ENST00000466861	ERO1B	Q86YB8	467 aa		28.04	■■■□□ 2.08
SUMO3-205	ENST00000466861	EHD4	Q9H223	541 aa		28.04	■■■□□ 2.08
SUMO3-205	ENST00000466861	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	28.04	■■■□□ 2.08	3e-6	■■■■■ 29.3
SUMO3-205	ENST00000466861	SIPA1L1	O43166	1804 aa		28.04	■■■□□ 2.08
SUMO3-205	ENST00000466861	CA12	O43570	354 aa		28.03	■■■□□ 2.08
SUMO3-205	ENST00000466861	CTNND1	O60716	968 aa	Known RBP	28.03	■■■□□ 2.08
SUMO3-205	ENST00000466861	GNAT2	P19087	354 aa		28.03	■■■□□ 2.08
SUMO3-205	ENST00000466861	SLFNL1	Q499Z3	407 aa		28.03	■■■□□ 2.08
SUMO3-205	ENST00000466861	OSBP2	Q969R2	916 aa		28.03	■■■□□ 2.08

Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms