RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ZNF215Q9UL58 517 aaPredicted RBP13.51□□□□□ -0.25
SEC16A-207ENST00000453963 ZSCAN26Q16670 478 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 ADALQ6DHV7 355 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 IFT20Q8IY31 132 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 KBTBD3Q8NAB2 608 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 MTMR6Q9Y217 621 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 ATP7AQ04656 1500 aa13.51□□□□□ -0.25
SEC16A-207ENST00000453963 GOLGA6BA6NDN3 693 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 POLR2DO15514 142 aaKnown RBP13.5□□□□□ -0.25
SEC16A-207ENST00000453963 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
SEC16A-207ENST00000453963 LACTBP83111 547 aaPredicted RBP13.5□□□□□ -0.25
SEC16A-207ENST00000453963 SETDB1Q15047 1291 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 COMMD10Q9Y6G5 202 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 KRT9P35527 623 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 ME3Q16798 604 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 VWA3BQ502W6 1294 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 ZBTB9Q96C00 473 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 PLCG2P16885 1265 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 ZBTB16Q05516 673 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 CALCOCO2Q13137 446 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 PAXIP1Q6ZW49 1069 aaPredicted RBP13.5□□□□□ -0.25
SEC16A-207ENST00000453963 DIS3L2Q8IYB7 885 aaKnown RBP13.5□□□□□ -0.25
SEC16A-207ENST00000453963 APPBP2Q92624 585 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 LRRC45Q96CN5 670 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 CCDC51Q96ER9 411 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 KIAA1468Q9P260 1216 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 EYA2O00167 538 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 PKP1Q13835 747 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 UBLCP1Q8WVY7 318 aaPredicted RBP13.5□□□□□ -0.25
SEC16A-207ENST00000453963 NAP1L3Q99457 506 aaPredicted RBP13.5□□□□□ -0.25
SEC16A-207ENST00000453963 SWAP70Q9UH65 585 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 MTUS1Q9ULD2 1270 aa13.5□□□□□ -0.25
SEC16A-207ENST00000453963 RGS12O14924 1447 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 PAK1Q13153 545 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 MTX1Q13505 466 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 ERCC6LQ2NKX8 1250 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 HS2ST1Q7LGA3 356 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 SECISBP2LQ93073 1101 aaKnown RBP13.49□□□□□ -0.25
SEC16A-207ENST00000453963 IFT74Q96LB3 600 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 ANKRD2Q9GZV1 360 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 EFCAB8A8MWE9 144 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 JAK2O60674 1132 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 ZNF174Q15697 407 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 RUFY4Q6ZNE9 571 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 TSNARE1Q96NA8 513 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 SH3TC1Q8TE82 1336 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 PTPRTO14522 1441 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 GNPATO15228 680 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 MAP3K9P80192 1104 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 POSTNQ15063 836 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 CCDC50Q8IVM0 306 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 LRRC8AQ8IWT6 810 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 RRP36Q96EU6 259 aaKnown RBP13.49□□□□□ -0.25
SEC16A-207ENST00000453963 SMC6Q96SB8 1091 aa13.49□□□□□ -0.25
SEC16A-207ENST00000453963 PICALMQ13492 652 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 CROCCP2Q86T23 111 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 PARP3Q9Y6F1 533 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 MXRA7P84157 204 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 LRMPQ12912 555 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 SV2BQ7L1I2 683 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 RPL13P26373 211 aaKnown RBP13.48□□□□□ -0.25
SEC16A-207ENST00000453963 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 TMEM87AQ8NBN3 555 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 KIAA1524Q8TCG1 905 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 MCM9Q9NXL9 1143 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 STIM2Q9P246 746 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 B4E1Z4 1266 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 WHAMMP3Q1A5X7 153 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 PARP10Q53GL7 1025 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 KRT40Q6A162 431 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 SREK1Q8WXA9 508 aaKnown RBP13.48□□□□□ -0.25
SEC16A-207ENST00000453963 NOX5Q96PH1 765 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 SYNCQ9H7C4 482 aa13.48□□□□□ -0.25
SEC16A-207ENST00000453963 USP19O94966 1318 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 PSDA5PKW4 1024 aaPredicted RBP13.47□□□□□ -0.25
SEC16A-207ENST00000453963 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
SEC16A-207ENST00000453963 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
SEC16A-207ENST00000453963 ATP5DP30049 168 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 UTP14CQ5TAP6 766 aaKnown RBP13.47□□□□□ -0.25
SEC16A-207ENST00000453963 CNNM4Q6P4Q7 775 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 CSGALNACT2Q8N6G5 542 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
SEC16A-207ENST00000453963 WWC3Q9ULE0 1092 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 HPDP32754 393 aaPredicted RBP13.47□□□□□ -0.25
SEC16A-207ENST00000453963 TIMM10P62072 90 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 MIGA1Q8NAN2 632 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 ZSWIM6Q9HCJ5 1215 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 SMIM23A6NLE4 172 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 NR1I2O75469 434 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 PDE4DQ08499 809 aa13.47□□□□□ -0.25
SEC16A-207ENST00000453963 PAK2Q13177 524 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms