RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 FARP2O94887 1054 aaPredicted RBP17.81■□□□□ 0.44
LYSMD3-202ENST00000453259 PRDX5P30044 214 aa17.81■□□□□ 0.44
LYSMD3-202ENST00000453259 ATP2B3Q16720 1220 aa17.81■□□□□ 0.44
LYSMD3-202ENST00000453259 ATG9AQ7Z3C6 839 aa17.81■□□□□ 0.44
LYSMD3-202ENST00000453259 CEP126Q9P2H0 1117 aa17.81■□□□□ 0.44
LYSMD3-202ENST00000453259 RBM27Q9P2N5 1060 aaKnown RBP17.81■□□□□ 0.44
LYSMD3-202ENST00000453259 RFX7Q2KHR2 1363 aa17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 GAKO14976 1311 aa17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 CTNND1O60716 968 aaKnown RBP17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 SGPL1O95470 568 aa17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 PTPRAP18433 802 aa17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 ALDH1L2Q3SY69 923 aa17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 ZHX2Q9Y6X8 837 aa17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 AK9Q5TCS8 1911 aa17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 MGAMO43451 1857 aa17.8■□□□□ 0.44
LYSMD3-202ENST00000453259 E9PSI1 815 aa17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 ADCY3O60266 1144 aa17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 CYP2C8P10632 490 aa17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 IL15P40933 162 aaPredicted RBP17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 SMCR8Q8TEV9 937 aaPredicted RBP17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 FAM163AQ96GL9 167 aaPredicted RBP17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 PNMA3Q9UL41 463 aa17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 AFG3L2Q9Y4W6 797 aa17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 LRRFIP2Q9Y608 721 aaKnown RBP17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 RANBP2P49792 3224 aaKnown RBP17.79■□□□□ 0.44
LYSMD3-202ENST00000453259 TNPO2O14787 897 aaKnown RBP17.78■□□□□ 0.44
LYSMD3-202ENST00000453259 ZBTB7BO15156 539 aaPredicted RBP17.78■□□□□ 0.44
LYSMD3-202ENST00000453259 NPM3O75607 178 aaKnown RBP17.78■□□□□ 0.44
LYSMD3-202ENST00000453259 MAP4K4O95819 1239 aaPredicted RBP17.78■□□□□ 0.44
LYSMD3-202ENST00000453259 RGS3P49796 1198 aa17.78■□□□□ 0.44
LYSMD3-202ENST00000453259 SPTY2D1Q68D10 685 aaPredicted RBP17.78■□□□□ 0.44
LYSMD3-202ENST00000453259 UBTFL1P0CB47 393 aaPredicted RBP17.77■□□□□ 0.44
LYSMD3-202ENST00000453259 FLT3LGP49771 235 aa17.77■□□□□ 0.44
LYSMD3-202ENST00000453259 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
LYSMD3-202ENST00000453259 COA7Q96BR5 231 aa17.77■□□□□ 0.44
LYSMD3-202ENST00000453259 UNC93B1Q9H1C4 597 aa17.77■□□□□ 0.44
LYSMD3-202ENST00000453259 PAK6Q9NQU5 681 aaPredicted RBP17.77■□□□□ 0.44
LYSMD3-202ENST00000453259 AGTPBP1Q9UPW5 1226 aa17.77■□□□□ 0.44
LYSMD3-202ENST00000453259 COL2A1P02458 1487 aaPredicted RBP17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 DOCK1Q14185 1865 aa17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 TBC1D12O60347 775 aa17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 EVI5O60447 810 aa17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 FAM110CQ1W6H9 321 aa17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 DZIP1Q86YF9 867 aaKnown RBP17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 ZSCAN29Q8IWY8 852 aaPredicted RBP17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 ANKLE1Q8NAG6 615 aa17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 PROCA1Q8NCQ7 364 aaPredicted RBP17.76■□□□□ 0.43
LYSMD3-202ENST00000453259 PTPRFP10586 1907 aa17.75■□□□□ 0.43
LYSMD3-202ENST00000453259 INHAP05111 366 aa17.75■□□□□ 0.43
LYSMD3-202ENST00000453259 PABPC4Q13310 644 aaKnown RBP eCLIP17.75■□□□□ 0.43
LYSMD3-202ENST00000453259 GADL1Q6ZQY3 521 aa17.75■□□□□ 0.43
LYSMD3-202ENST00000453259 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
LYSMD3-202ENST00000453259 CRISPLD2Q9H0B8 497 aa17.75■□□□□ 0.43
LYSMD3-202ENST00000453259 GABRQQ9UN88 632 aa17.75■□□□□ 0.43
LYSMD3-202ENST00000453259 SZT2Q5T011 3432 aa17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 ECM2O94769 699 aaPredicted RBP17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 CT47B1P0C2W7 299 aaPredicted RBP17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 PHKA1P46020 1223 aa17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 GCLCP48506 637 aaPredicted RBP17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 CCDC102BQ68D86 513 aa17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 ZFPM1Q8IX07 1006 aa17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 COPRSQ9NQ92 184 aa17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
LYSMD3-202ENST00000453259 TFRCP02786 760 aaKnown RBP17.73■□□□□ 0.43
LYSMD3-202ENST00000453259 GPR153Q6NV75 609 aa17.73■□□□□ 0.43
LYSMD3-202ENST00000453259 OSBPL5Q9H0X9 879 aaPredicted RBP17.73■□□□□ 0.43
LYSMD3-202ENST00000453259 SIL1Q9H173 461 aa17.73■□□□□ 0.43
LYSMD3-202ENST00000453259 MROH7-TTC4A0A0A0MT08 1334 aa17.72■□□□□ 0.43
LYSMD3-202ENST00000453259 MVPQ14764 893 aaKnown RBP17.72■□□□□ 0.43
LYSMD3-202ENST00000453259 SH3BP5LQ7L8J4 393 aa17.72■□□□□ 0.43
LYSMD3-202ENST00000453259 NECAB2Q7Z6G3 386 aa17.72■□□□□ 0.43
LYSMD3-202ENST00000453259 DEFB118Q96PH6 123 aa17.72■□□□□ 0.43
LYSMD3-202ENST00000453259 AKAP2Q9Y2D5 859 aa17.72■□□□□ 0.43
LYSMD3-202ENST00000453259 PHIPQ8WWQ0 1821 aa17.72■□□□□ 0.43
LYSMD3-202ENST00000453259 GPR75-ASB3A0A0A6YYF3 556 aa17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 TRIM75PA6NK02 468 aa17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 HMGCRP04035 888 aa17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 ELNP15502 786 aa17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 BTDP43251 543 aa17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 GSTO1P78417 241 aa17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
LYSMD3-202ENST00000453259 LDHCP07864 332 aa17.7■□□□□ 0.42
LYSMD3-202ENST00000453259 BMP8BP34820 402 aa17.7■□□□□ 0.42
LYSMD3-202ENST00000453259 ANKRD13CQ8N6S4 541 aa17.7■□□□□ 0.42
LYSMD3-202ENST00000453259 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
LYSMD3-202ENST00000453259 ABCF2Q9UG63 623 aa17.7■□□□□ 0.42
LYSMD3-202ENST00000453259 LOC285556D6RIA3 1793 aa17.7■□□□□ 0.42
LYSMD3-202ENST00000453259 SLFN5Q08AF3 891 aa17.69■□□□□ 0.42
LYSMD3-202ENST00000453259 ERICH6Q7L0X2 663 aa17.69■□□□□ 0.42
LYSMD3-202ENST00000453259 ZNF280CQ8ND82 737 aa17.69■□□□□ 0.42
LYSMD3-202ENST00000453259 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.69■□□□□ 0.42
LYSMD3-202ENST00000453259 DDX4Q9NQI0 724 aaKnown RBP17.69■□□□□ 0.42
LYSMD3-202ENST00000453259 HERC5Q9UII4 1024 aaKnown RBP17.69■□□□□ 0.42
LYSMD3-202ENST00000453259 IGSF3O75054 1194 aa17.68■□□□□ 0.42
LYSMD3-202ENST00000453259 RHBDL3P58872 404 aa17.68■□□□□ 0.42
LYSMD3-202ENST00000453259 PICALMQ13492 652 aa17.68■□□□□ 0.42
LYSMD3-202ENST00000453259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms