RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 FLIIQ13045 1269 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 GRIN2CQ14957 1233 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 SUZ12Q15022 739 aaKnown RBP7.34□□□□□ -1.23
SDCBP-205ENST00000447267 RGMBQ6NW40 437 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 USP17L2Q6R6M4 530 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 USP17L1Q7RTZ2 530 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 NLRP8Q86W28 1048 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 C1orf216Q8TAB5 229 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 DPF3Q92784 378 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 ZNF277Q9NRM2 450 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-205ENST00000447267 GGA1Q9UJY5 639 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 NSFL1CQ9UNZ2 370 aaKnown RBP7.34□□□□□ -1.23
SDCBP-205ENST00000447267 PCDHGC4Q9Y5F7 938 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 GJA3Q9Y6H8 435 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 UNC80Q8N2C7 3258 aa7.34□□□□□ -1.23
SDCBP-205ENST00000447267 LTBP3Q9NS15 1303 aa7.33□□□□□ -1.24
SDCBP-205ENST00000447267 WTIPA6NIX2 430 aaPredicted RBP7.33□□□□□ -1.24
SDCBP-205ENST00000447267 ATXN7O15265 892 aaPredicted RBP7.33□□□□□ -1.24
SDCBP-205ENST00000447267 MAPTP10636 758 aaKnown RBP7.33□□□□□ -1.24
SDCBP-205ENST00000447267 CD33P20138 364 aa7.33□□□□□ -1.24
SDCBP-205ENST00000447267 INTS3Q68E01 1043 aaKnown RBP7.33□□□□□ -1.24
SDCBP-205ENST00000447267 SLC9A9Q8IVB4 645 aa7.33□□□□□ -1.24
SDCBP-205ENST00000447267 PLEKHM2Q8IWE5 1019 aa7.33□□□□□ -1.24
SDCBP-205ENST00000447267 EDARADDQ8WWZ3 215 aa7.33□□□□□ -1.24
SDCBP-205ENST00000447267 ZDHHC3Q9NYG2 299 aa7.33□□□□□ -1.24
SDCBP-205ENST00000447267 RAD21O60216 631 aa7.32□□□□□ -1.24
SDCBP-205ENST00000447267 COL8A1P27658 744 aa7.32□□□□□ -1.24
SDCBP-205ENST00000447267 ZNF157P51786 506 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-205ENST00000447267 ARSJQ5FYB0 599 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-205ENST00000447267 LINC00114Q6XXX2 140 aa7.32□□□□□ -1.24
SDCBP-205ENST00000447267 SLCO4C1Q6ZQN7 724 aa7.32□□□□□ -1.24
SDCBP-205ENST00000447267 USHBP1Q8N6Y0 703 aa7.32□□□□□ -1.24
SDCBP-205ENST00000447267 TPCN2Q8NHX9 752 aa7.32□□□□□ -1.24
SDCBP-205ENST00000447267 GDF2Q9UK05 429 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-205ENST00000447267 SPTBN5Q9NRC6 3674 aaKnown RBP7.32□□□□□ -1.24
SDCBP-205ENST00000447267 VCANP13611 3396 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 SYNGAP1Q96PV0 1343 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 ATP9BO43861 1147 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 LZTS3O60299 673 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-205ENST00000447267 LMOD1P29536 600 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-205ENST00000447267 TEAD4Q15561 434 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 PLA2G4EQ3MJ16 856 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 BEND7Q8N7W2 519 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-205ENST00000447267 L3MBTL2Q969R5 705 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 R3HDMLQ9H3Y0 253 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 SUV39H2Q9H5I1 410 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 SCN4AP35499 1836 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 INSRP06213 1382 aa7.31□□□□□ -1.24
SDCBP-205ENST00000447267 NEURL1BA8MQ27 555 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 FZD9O00144 591 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 EML1O00423 815 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 CYP27B1O15528 508 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 EFSO43281 561 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 SERPINB2P05120 415 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 ARAFP10398 606 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 NFIXQ14938 502 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 FIGNL1Q6PIW4 674 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 OLFM4Q6UX06 510 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 USP50Q70EL3 339 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-205ENST00000447267 FCHSD1Q86WN1 690 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 GPC2Q8N158 579 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 GOLGA6L1Q8N7Z2 621 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 TSPAN10Q9H1Z9 355 aaPredicted RBP7.3□□□□□ -1.24
SDCBP-205ENST00000447267 ATG3Q9NT62 314 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 STAP2Q9UGK3 403 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 CEP290O15078 2479 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 NFAT5O94916 1531 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 CARMIL3Q8ND23 1372 aa7.3□□□□□ -1.24
SDCBP-205ENST00000447267 USP42Q9H9J4 1324 aaKnown RBP7.29□□□□□ -1.24
SDCBP-205ENST00000447267 KRBA1A5PL33 1030 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 PHF20L1A8MW92 1017 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 BACH1O14867 736 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 KHNYNO15037 678 aaKnown RBP7.29□□□□□ -1.24
SDCBP-205ENST00000447267 PROCP04070 461 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 FAM157BP0CG42 384 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 EPXP11678 715 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 NOS2P35228 1153 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 USPL1Q5W0Q7 1092 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 CCDC102BQ68D86 513 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 USP48Q86UV5 1035 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 BTBD6Q96KE9 485 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 TRIM17Q9Y577 477 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 USP31Q70CQ4 1352 aa7.29□□□□□ -1.24
SDCBP-205ENST00000447267 RANBP2P49792 3224 aaKnown RBP7.29□□□□□ -1.24
SDCBP-205ENST00000447267 FKTNO75072 461 aa7.28□□□□□ -1.24
SDCBP-205ENST00000447267 TATP17735 454 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-205ENST00000447267 DGKGP49619 791 aa7.28□□□□□ -1.24
SDCBP-205ENST00000447267 SAMD5Q5TGI4 173 aa7.28□□□□□ -1.24
SDCBP-205ENST00000447267 LRRC69Q6ZNQ3 347 aa7.28□□□□□ -1.24
SDCBP-205ENST00000447267 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.28□□□□□ -1.24
SDCBP-205ENST00000447267 WWC1Q8IX03 1113 aa7.28□□□□□ -1.24
SDCBP-205ENST00000447267 OGFOD1Q8N543 542 aa7.28□□□□□ -1.24
SDCBP-205ENST00000447267 IP6K1Q92551 441 aa7.28□□□□□ -1.24
SDCBP-205ENST00000447267 ADGRB1O14514 1584 aa7.28□□□□□ -1.24
SDCBP-205ENST00000447267 BRCA2P51587 3418 aa7.27□□□□□ -1.24
SDCBP-205ENST00000447267 SFI1A8K8P3 1242 aa7.27□□□□□ -1.25
SDCBP-205ENST00000447267 PCBP4P57723 403 aaKnown RBP7.27□□□□□ -1.25
SDCBP-205ENST00000447267 NBPF6Q5VWK0 638 aa7.27□□□□□ -1.25
SDCBP-205ENST00000447267 PRPF40BQ6NWY9 871 aaKnown RBP7.27□□□□□ -1.25
SDCBP-205ENST00000447267 PODNQ7Z5L7 613 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms