RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 RBM17Q96I25 401 aaKnown RBP20.38■□□□□ 0.85
SMC6-206ENST00000446852 USP28Q96RU2 1077 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 SLC12A7Q9Y666 1083 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 NRXN2Q9P2S2 1712 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 DLEC1Q9Y238 1755 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 PHKBQ93100 1093 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 AIFM3Q96NN9 605 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 NID2Q14112 1375 aa20.38■□□□□ 0.85
SMC6-206ENST00000446852 RANBP6O60518 1105 aaKnown RBP20.37■□□□□ 0.85
SMC6-206ENST00000446852 LETM1O95202 739 aaPredicted RBP20.37■□□□□ 0.85
SMC6-206ENST00000446852 EVX2Q03828 476 aa20.37■□□□□ 0.85
SMC6-206ENST00000446852 GIMAP6Q6P9H5 292 aa20.37■□□□□ 0.85
SMC6-206ENST00000446852 CTR9Q6PD62 1173 aa20.37■□□□□ 0.85
SMC6-206ENST00000446852 C15orf52Q6ZUT6 534 aaKnown RBP20.37■□□□□ 0.85
SMC6-206ENST00000446852 GOLGA6L4A6NEF3 574 aa20.37■□□□□ 0.85
SMC6-206ENST00000446852 HOXA10P31260 410 aaPredicted RBP20.37■□□□□ 0.85
SMC6-206ENST00000446852 WTAPQ15007 396 aa20.37■□□□□ 0.85
SMC6-206ENST00000446852 ZNF772Q68DY9 489 aaPredicted RBP20.37■□□□□ 0.85
SMC6-206ENST00000446852 CDKL5O76039 1030 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 SART3Q15020 963 aaKnown RBP20.36■□□□□ 0.85
SMC6-206ENST00000446852 ZNF804AQ7Z570 1209 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 DZIP1Q86YF9 867 aaKnown RBP20.36■□□□□ 0.85
SMC6-206ENST00000446852 PPP1R9BQ96SB3 815 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 MTA3Q9BTC8 594 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 RCOR1Q9UKL0 485 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
SMC6-206ENST00000446852 UFL1O94874 794 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 CCDC173Q0VFZ6 552 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 GRIK5Q16478 980 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 AKT1S1Q96B36 256 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 CRNKL1Q9BZJ0 848 aaKnown RBP20.36■□□□□ 0.85
SMC6-206ENST00000446852 DCP1AQ9NPI6 582 aaPredicted RBP20.36■□□□□ 0.85
SMC6-206ENST00000446852 RTN4Q9NQC3 1192 aaKnown RBP20.36■□□□□ 0.85
SMC6-206ENST00000446852 MYH6P13533 1939 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 CDK5RAP2Q96SN8 1893 aa20.36■□□□□ 0.85
SMC6-206ENST00000446852 USP17L12C9JPN9 530 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 USP17L21D6R901 530 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 PLSCR1O15162 318 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 SPTY2D1Q68D10 685 aaPredicted RBP20.35■□□□□ 0.85
SMC6-206ENST00000446852 WDR66Q8TBY9 1149 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 ESR2Q92731 530 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 FUCA2Q9BTY2 467 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 KIF28PB7ZC32 967 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 ATL3Q6DD88 541 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 CPLX2Q6PUV4 134 aaKnown RBP20.35■□□□□ 0.85
SMC6-206ENST00000446852 ZNF396Q96N95 335 aaPredicted RBP20.35■□□□□ 0.85
SMC6-206ENST00000446852 ALG1Q9BT22 464 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 DACT1Q9NYF0 836 aa20.35■□□□□ 0.85
SMC6-206ENST00000446852 TNS1Q9HBL0 1735 aaKnown RBP20.34■□□□□ 0.85
SMC6-206ENST00000446852 ERICH2A1L162 156 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 UBE2Q2LH0YL09 131 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 APBA3O96018 575 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 FGRP09769 529 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 SEC23AQ15436 765 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 TMED8Q6PL24 325 aaPredicted RBP20.34■□□□□ 0.85
SMC6-206ENST00000446852 COL23A1Q86Y22 540 aaPredicted RBP20.34■□□□□ 0.85
SMC6-206ENST00000446852 TNKSO95271 1327 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 PRDM1O75626 825 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 BBOX1O75936 387 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 LDHBP07195 334 aaKnown RBP20.34■□□□□ 0.85
SMC6-206ENST00000446852 ANP32BQ92688 251 aaKnown RBP20.34■□□□□ 0.85
SMC6-206ENST00000446852 CRAMP1Q96RY5 1269 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 GGA1Q9UJY5 639 aa20.34■□□□□ 0.85
SMC6-206ENST00000446852 POLR3DP05423 398 aaPredicted RBP20.33■□□□□ 0.85
SMC6-206ENST00000446852 ATP2B4P23634 1241 aa20.33■□□□□ 0.85
SMC6-206ENST00000446852 IARSP41252 1262 aaKnown RBP20.33■□□□□ 0.85
SMC6-206ENST00000446852 KIF23Q02241 960 aaPredicted RBP20.33■□□□□ 0.85
SMC6-206ENST00000446852 BICD2Q8TD16 824 aa20.33■□□□□ 0.85
SMC6-206ENST00000446852 COL11A2P13942 1736 aaPredicted RBP20.33■□□□□ 0.85
SMC6-206ENST00000446852 NAV1Q8NEY1 1877 aa20.33■□□□□ 0.84
SMC6-206ENST00000446852 NR1I2O75469 434 aa20.33■□□□□ 0.84
SMC6-206ENST00000446852 SYNE3Q6ZMZ3 975 aa20.33■□□□□ 0.84
SMC6-206ENST00000446852 NUP62CLQ9H1M0 184 aa20.33■□□□□ 0.84
SMC6-206ENST00000446852 ATP8A2Q9NTI2 1148 aa20.33■□□□□ 0.84
SMC6-206ENST00000446852 DIXDC1Q155Q3 683 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 ZNF654Q8IZM8 581 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 RGS22Q8NE09 1264 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 CD209Q9NNX6 404 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 PODXL2Q9NZ53 605 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 POLLQ9UGP5 575 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.32■□□□□ 0.84
SMC6-206ENST00000446852 STK36Q9NRP7 1315 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 CYP2D6P10635 497 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 IFNAR1P17181 557 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 CAMK4Q16566 473 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 BRAPQ7Z569 592 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 TMTC2Q8N394 836 aa20.32■□□□□ 0.84
SMC6-206ENST00000446852 ENAHQ8N8S7 591 aaPredicted RBP20.32■□□□□ 0.84
SMC6-206ENST00000446852 RTN1Q16799 776 aa20.31■□□□□ 0.84
SMC6-206ENST00000446852 KRT40Q6A162 431 aa20.31■□□□□ 0.84
SMC6-206ENST00000446852 TBC1D16Q8TBP0 767 aa20.31■□□□□ 0.84
SMC6-206ENST00000446852 SLC26A6Q9BXS9 759 aa20.31■□□□□ 0.84
SMC6-206ENST00000446852 FMNL1O95466 1100 aaPredicted RBP20.31■□□□□ 0.84
SMC6-206ENST00000446852 HMGB2P26583 209 aaKnown RBP20.31■□□□□ 0.84
SMC6-206ENST00000446852 MYSM1Q5VVJ2 828 aa20.31■□□□□ 0.84
SMC6-206ENST00000446852 ZSCAN10Q96SZ4 725 aaPredicted RBP20.31■□□□□ 0.84
SMC6-206ENST00000446852 DDX19AQ9NUU7 478 aaKnown RBP20.31■□□□□ 0.84
SMC6-206ENST00000446852 RTEL1Q9NZ71 1219 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms