RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ELOAQ14241 798 aaKnown RBP6.6□□□□□ -1.35
RFC3-202ENST00000434425 UTP14CQ5TAP6 766 aaKnown RBP6.6□□□□□ -1.35
RFC3-202ENST00000434425 CCDC73Q6ZRK6 1079 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 UBE2Q1Q7Z7E8 422 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 AMIGO3Q86WK7 504 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 CDHR1Q96JP9 859 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 NBPF3Q9H094 633 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 CAPN10Q9HC96 672 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 ENAMQ9NRM1 1142 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 A0A1W2PP64 1363 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 MAP3K19Q56UN5 1328 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 TRIM64CA6NLI5 447 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 C6orf229H3BNL8 230 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 IPO5O00410 1097 aaKnown RBP6.6□□□□□ -1.35
RFC3-202ENST00000434425 SRGNP10124 158 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 FOSL1P15407 271 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 NOS2P35228 1153 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 TRAPPC10P48553 1259 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 AMPHP49418 695 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 INO80DQ53TQ3 878 aaPredicted RBP6.6□□□□□ -1.35
RFC3-202ENST00000434425 RC3H1Q5TC82 1133 aaKnown RBP6.6□□□□□ -1.35
RFC3-202ENST00000434425 CHCHD4Q8N4Q1 142 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 USHBP1Q8N6Y0 703 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 TSR2Q969E8 191 aaKnown RBP6.6□□□□□ -1.35
RFC3-202ENST00000434425 ZFRQ96KR1 1074 aaKnown RBP6.6□□□□□ -1.35
RFC3-202ENST00000434425 SERINC2Q96SA4 455 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 TMEM63CQ9P1W3 806 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 SUN2Q9UH99 717 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 ZMIZ1Q9ULJ6 1067 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 MEGF6O75095 1541 aa6.59□□□□□ -1.35
RFC3-202ENST00000434425 EDC4Q6P2E9 1401 aaKnown RBP6.59□□□□□ -1.35
RFC3-202ENST00000434425 TAF1LQ8IZX4 1826 aa6.59□□□□□ -1.35
RFC3-202ENST00000434425 PER1O15534 1290 aaPredicted RBP6.59□□□□□ -1.36
RFC3-202ENST00000434425 LZTS3O60299 673 aaPredicted RBP6.59□□□□□ -1.36
RFC3-202ENST00000434425 NEFHP12036 1026 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 ATP6V1AP38606 617 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 SERPINB4P48594 390 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 TRPC1P48995 793 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 CBLBQ13191 982 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 RRS1Q15050 365 aaKnown RBP6.59□□□□□ -1.36
RFC3-202ENST00000434425 TMEM164Q5U3C3 297 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 CCDC70Q6NSX1 233 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 MPRIPQ6WCQ1 1025 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 DZIP3Q86Y13 1208 aaKnown RBP6.59□□□□□ -1.36
RFC3-202ENST00000434425 RELL1Q8IUW5 271 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 RAVER1Q8IY67 606 aaKnown RBP6.59□□□□□ -1.36
RFC3-202ENST00000434425 COG3Q96JB2 828 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 UCN2Q96RP3 112 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 CARD11Q9BXL7 1154 aa6.59□□□□□ -1.36
RFC3-202ENST00000434425 FAM208AQ9UK61 1670 aaKnown RBP6.59□□□□□ -1.36
RFC3-202ENST00000434425 ADCY9O60503 1353 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 A0A1W2PRQ8 180 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 BPNT1O95861 308 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 HNRNPCP07910 306 aaKnown RBP eCLIP6.58□□□□□ -1.363e-10■■□□□ 11.9
RFC3-202ENST00000434425 NAT2P11245 290 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 PBX2P40425 430 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
RFC3-202ENST00000434425 DUSP27Q5VZP5 1158 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 USP48Q86UV5 1035 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 ACRBPQ8NEB7 543 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 SMARCC1Q92922 1105 aaPredicted RBP6.58□□□□□ -1.36
RFC3-202ENST00000434425 CCSER2Q9H7U1 834 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 MRS2Q9HD23 443 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 PGAP2Q9UHJ9 254 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 TMCC3Q9ULS5 477 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 ZNF652Q9Y2D9 606 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 NDUFB9Q9Y6M9 179 aa6.58□□□□□ -1.36
RFC3-202ENST00000434425 SMG6Q86US8 1419 aaKnown RBP6.57□□□□□ -1.36
RFC3-202ENST00000434425 C5P01031 1676 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 INSRP06213 1382 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 RNF123Q5XPI4 1314 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 IGSF1Q8N6C5 1336 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 ITGB4P16144 1822 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 DYTNA2CJ06 578 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 KIF1CO43896 1103 aaKnown RBP6.57□□□□□ -1.36
RFC3-202ENST00000434425 PSMA3P25788 255 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 HMGN5P82970 282 aaKnown RBP6.57□□□□□ -1.36
RFC3-202ENST00000434425 VAC14Q08AM6 782 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 ACBD5Q5T8D3 534 aaPredicted RBP6.57□□□□□ -1.36
RFC3-202ENST00000434425 LAPTM4BQ86VI4 370 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 TTC30AQ86WT1 665 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 SKAP1Q86WV1 359 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 SUGP1Q8IWZ8 645 aaKnown RBP6.57□□□□□ -1.36
RFC3-202ENST00000434425 SMAP1Q8IYB5 467 aaPredicted RBP6.57□□□□□ -1.36
RFC3-202ENST00000434425 DNAJC5GQ8N7S2 189 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 FLAD1Q8NFF5 587 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 PRR7Q8TB68 274 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 POLR3CQ9BUI4 534 aaPredicted RBP6.57□□□□□ -1.36
RFC3-202ENST00000434425 SLC27A5Q9Y2P5 690 aa6.57□□□□□ -1.36
RFC3-202ENST00000434425 GOLGA6L6A8MZA4 724 aa6.56□□□□□ -1.36
RFC3-202ENST00000434425 PES1O00541 588 aaKnown RBP6.56□□□□□ -1.36
RFC3-202ENST00000434425 FYB1O15117 783 aa6.56□□□□□ -1.36
RFC3-202ENST00000434425 CYP27B1O15528 508 aa6.56□□□□□ -1.36
RFC3-202ENST00000434425 TATP17735 454 aaPredicted RBP6.56□□□□□ -1.36
RFC3-202ENST00000434425 RPL17P18621 184 aaKnown RBP6.56□□□□□ -1.36
RFC3-202ENST00000434425 CDC27P30260 824 aa6.56□□□□□ -1.36
RFC3-202ENST00000434425 DNAJA1P31689 397 aaKnown RBP6.56□□□□□ -1.36
RFC3-202ENST00000434425 FAM160A1Q05DH4 1040 aa6.56□□□□□ -1.36
RFC3-202ENST00000434425 BRD3Q15059 726 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms