RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 LY9Q9HBG7 655 aa17.87■□□□□ 0.45
ACTB-204ENST00000425660 MTMR6Q9Y217 621 aa17.87■□□□□ 0.45
ACTB-204ENST00000425660 JAK2O60674 1132 aa17.86■□□□□ 0.45
ACTB-204ENST00000425660 KCNA3P22001 575 aa17.86■□□□□ 0.45
ACTB-204ENST00000425660 HMGN5P82970 282 aaKnown RBP17.86■□□□□ 0.45
ACTB-204ENST00000425660 LARP1BQ659C4 914 aaKnown RBP17.86■□□□□ 0.45
ACTB-204ENST00000425660 CERS5Q8N5B7 392 aa17.86■□□□□ 0.45
ACTB-204ENST00000425660 SH3RF3Q8TEJ3 882 aaPredicted RBP17.86■□□□□ 0.45
ACTB-204ENST00000425660 NOL10Q9BSC4 688 aaKnown RBP17.86■□□□□ 0.45
ACTB-204ENST00000425660 PLCG2P16885 1265 aa17.86■□□□□ 0.45
ACTB-204ENST00000425660 NT5C2P49902 561 aa17.86■□□□□ 0.45
ACTB-204ENST00000425660 FKBP1AP62942 108 aaKnown RBP17.86■□□□□ 0.45
ACTB-204ENST00000425660 DOK7Q18PE1 504 aa17.86■□□□□ 0.45
ACTB-204ENST00000425660 TTLL6Q8N841 843 aa17.86■□□□□ 0.45
ACTB-204ENST00000425660 ESR2Q92731 530 aa17.86■□□□□ 0.45
ACTB-204ENST00000425660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.86■□□□□ 0.453e-23■■□□□ 14.2
ACTB-204ENST00000425660 BAZ2AQ9UIF9 1905 aaKnown RBP17.85■□□□□ 0.45
ACTB-204ENST00000425660 MYH2Q9UKX2 1941 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 GOLGA8BA8MQT2 603 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 SMIM22K7EJ46 135 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 ORC4O43929 436 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 DHX16O60231 1041 aaKnown RBP17.85■□□□□ 0.45
ACTB-204ENST00000425660 F13A1P00488 732 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 BTDP43251 543 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 CCT2P78371 535 aaKnown RBP17.85■□□□□ 0.45
ACTB-204ENST00000425660 APOA5Q6Q788 366 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 SUPT20HQ8NEM7 779 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 NCOA5Q9HCD5 579 aaKnown RBP17.85■□□□□ 0.45
ACTB-204ENST00000425660 ROBO3Q96MS0 1386 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 LAMB1P07942 1786 aa17.85■□□□□ 0.45
ACTB-204ENST00000425660 CYP2D7A0A087X1C5 515 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 DTNBO60941 627 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 RHBDL3P58872 404 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 KIAA2012Q0VF49 1180 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 SART3Q15020 963 aaKnown RBP17.84■□□□□ 0.45
ACTB-204ENST00000425660 TMEM67Q5HYA8 995 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 MTFR1LQ9H019 292 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 NID2Q14112 1375 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 PTPDC1A2A3K4 754 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 SOCS7O14512 581 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 IFIT3O14879 490 aaKnown RBP17.84■□□□□ 0.45
ACTB-204ENST00000425660 TRAK2O60296 914 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 USP5P45974 858 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 RRP12Q5JTH9 1297 aaKnown RBP17.84■□□□□ 0.45
ACTB-204ENST00000425660 C12orf60Q5U649 245 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 STRIP1Q5VSL9 837 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
ACTB-204ENST00000425660 MCTP1Q6DN14 999 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 TMTC2Q8N394 836 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
ACTB-204ENST00000425660 DBNDD1Q9H9R9 158 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 MCM9Q9NXL9 1143 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 ATP6V1DQ9Y5K8 247 aa17.84■□□□□ 0.45
ACTB-204ENST00000425660 G3V3G9 751 aa17.83■□□□□ 0.44
ACTB-204ENST00000425660 SLC3A2P08195 630 aaKnown RBP17.83■□□□□ 0.44
ACTB-204ENST00000425660 DPEP1P16444 411 aa17.83■□□□□ 0.44
ACTB-204ENST00000425660 RCAN1P53805 252 aa17.83■□□□□ 0.44
ACTB-204ENST00000425660 DCAF8Q5TAQ9 597 aa17.83■□□□□ 0.44
ACTB-204ENST00000425660 SENP2Q9HC62 589 aa17.83■□□□□ 0.44
ACTB-204ENST00000425660 TOMM22Q9NS69 142 aa17.83■□□□□ 0.44
ACTB-204ENST00000425660 KIF3AQ9Y496 699 aa17.83■□□□□ 0.44
ACTB-204ENST00000425660 DAGLAQ9Y4D2 1042 aa17.83■□□□□ 0.44
ACTB-204ENST00000425660 C21orf2O43822 256 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 ECE2O60344 883 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 TGFB2P61812 414 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 SKOR2Q2VWA4 1001 aaPredicted RBP17.82■□□□□ 0.44
ACTB-204ENST00000425660 RTKN2Q8IZC4 609 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 TGFBRAP1Q8WUH2 860 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 PSMD1Q99460 953 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 MRIQ9BWK5 157 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 NAP1L2Q9ULW6 460 aaPredicted RBP17.82■□□□□ 0.44
ACTB-204ENST00000425660 USP17L8P0C7I0 530 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 SEC23AQ15436 765 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 CCDC93Q567U6 631 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 HHIPL2Q6UWX4 724 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 LMBRD1Q9NUN5 540 aa17.82■□□□□ 0.44
ACTB-204ENST00000425660 ZNF219Q9P2Y4 722 aaPredicted RBP17.82■□□□□ 0.44
ACTB-204ENST00000425660 TTF2Q9UNY4 1162 aaKnown RBP17.82■□□□□ 0.44
ACTB-204ENST00000425660 DDX60LQ5H9U9 1706 aaKnown RBP17.81■□□□□ 0.44
ACTB-204ENST00000425660 ERICH2A1L162 156 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 VPS37CA5D8V6 355 aaPredicted RBP17.81■□□□□ 0.44
ACTB-204ENST00000425660 ZBTB43O43298 467 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.448e-18■□□□□ 9.9
ACTB-204ENST00000425660 EVX2Q03828 476 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 PDE4BQ07343 736 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 WTAPQ15007 396 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 DACT2Q5SW24 774 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 CDC37L1Q7L3B6 337 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 DDX11Q96FC9 970 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 UBAC1Q9BSL1 405 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 SLC12A7Q9Y666 1083 aa17.81■□□□□ 0.44
ACTB-204ENST00000425660 FLT1P17948 1338 aa17.8■□□□□ 0.44
ACTB-204ENST00000425660 CYP2D6P10635 497 aa17.8■□□□□ 0.44
ACTB-204ENST00000425660 FDPSP14324 419 aaKnown RBP17.8■□□□□ 0.44
ACTB-204ENST00000425660 POLD1P28340 1107 aa17.8■□□□□ 0.44
ACTB-204ENST00000425660 AOC3Q16853 763 aa17.8■□□□□ 0.44
ACTB-204ENST00000425660 TEX11Q8IYF3 940 aa17.8■□□□□ 0.44
ACTB-204ENST00000425660 STK11IPQ8N1F8 1099 aa17.8■□□□□ 0.44
ACTB-204ENST00000425660 RGS22Q8NE09 1264 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms